RNA–Protein interactions for RNA: ENST00000272602.6

CNGA3-201, Transcript of cyclic nucleotide gated channel alpha 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA3, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA3-201ENST00000272602 FGFR1P11362 822 aa11.33□□□□□ -0.6
CNGA3-201ENST00000272602 ARL4CP56559 192 aa11.33□□□□□ -0.6
CNGA3-201ENST00000272602 ZNF280AP59817 542 aaPredicted RBP11.33□□□□□ -0.6
CNGA3-201ENST00000272602 PTK6Q13882 451 aa11.33□□□□□ -0.6
CNGA3-201ENST00000272602 TFDP1Q14186 410 aa11.33□□□□□ -0.6
CNGA3-201ENST00000272602 C3orf62Q6ZUJ4 267 aa11.33□□□□□ -0.6
CNGA3-201ENST00000272602 PRPF39Q86UA1 669 aaKnown RBP11.33□□□□□ -0.6
CNGA3-201ENST00000272602 RHPN2Q8IUC4 686 aa11.33□□□□□ -0.6
CNGA3-201ENST00000272602 SLC13A1Q9BZW2 595 aa11.33□□□□□ -0.6
CNGA3-201ENST00000272602 GPRC5CQ9NQ84 441 aa11.33□□□□□ -0.6
CNGA3-201ENST00000272602 GABBR1Q9UBS5 961 aa11.33□□□□□ -0.6
CNGA3-201ENST00000272602 ZMYM2Q9UBW7 1377 aa11.33□□□□□ -0.6
CNGA3-201ENST00000272602 UBR2Q8IWV8 1755 aa11.32□□□□□ -0.6
CNGA3-201ENST00000272602 RNASEH1O60930 286 aaKnown RBP11.32□□□□□ -0.6
CNGA3-201ENST00000272602 CDK7P50613 346 aa11.32□□□□□ -0.6
CNGA3-201ENST00000272602 GALK1P51570 392 aa11.32□□□□□ -0.6
CNGA3-201ENST00000272602 ATN1P54259 1190 aaPredicted RBP11.32□□□□□ -0.6
CNGA3-201ENST00000272602 PPP3CAQ08209 521 aa11.32□□□□□ -0.6
CNGA3-201ENST00000272602 SEZ6Q53EL9 994 aa11.32□□□□□ -0.6
CNGA3-201ENST00000272602 FAM160B2Q86V87 743 aa11.32□□□□□ -0.6
CNGA3-201ENST00000272602 LRRC71Q8N4P6 559 aa11.32□□□□□ -0.6
CNGA3-201ENST00000272602 POU5F2Q8N7G0 328 aa11.32□□□□□ -0.6
CNGA3-201ENST00000272602 GLIS1Q8NBF1 620 aa11.32□□□□□ -0.6
CNGA3-201ENST00000272602 EPS8L1Q8TE68 723 aa11.32□□□□□ -0.6
CNGA3-201ENST00000272602 PPP2R3CQ969Q6 453 aa11.32□□□□□ -0.6
CNGA3-201ENST00000272602 NLRP4Q96MN2 994 aa11.32□□□□□ -0.6
CNGA3-201ENST00000272602 ACAP3Q96P50 834 aa11.32□□□□□ -0.6
CNGA3-201ENST00000272602 ACAD9Q9H845 621 aa11.32□□□□□ -0.6
CNGA3-201ENST00000272602 FAF1Q9UNN5 650 aaPredicted RBP11.32□□□□□ -0.6
CNGA3-201ENST00000272602 NUMBLQ9Y6R0 609 aa11.32□□□□□ -0.6
CNGA3-201ENST00000272602 SBF2Q86WG5 1849 aa11.32□□□□□ -0.6
CNGA3-201ENST00000272602 FSCN2O14926 492 aa11.32□□□□□ -0.6
CNGA3-201ENST00000272602 PDE5AO76074 875 aa11.32□□□□□ -0.6
CNGA3-201ENST00000272602 CYP1A1P04798 512 aaPredicted RBP11.32□□□□□ -0.6
CNGA3-201ENST00000272602 GAP43P17677 238 aa11.32□□□□□ -0.6
CNGA3-201ENST00000272602 YWHAGP61981 247 aaKnown RBP eCLIP11.32□□□□□ -0.6
CNGA3-201ENST00000272602 CDC16Q13042 620 aa11.32□□□□□ -0.6
CNGA3-201ENST00000272602 SIX1Q15475 284 aaPredicted RBP11.32□□□□□ -0.6
CNGA3-201ENST00000272602 ATP13A4Q4VNC1 1196 aa11.32□□□□□ -0.6
CNGA3-201ENST00000272602 IYDQ6PHW0 289 aa11.32□□□□□ -0.6
CNGA3-201ENST00000272602 CEP170P1Q96L14 293 aa11.32□□□□□ -0.6
CNGA3-201ENST00000272602 TTC25Q96NG3 672 aa11.32□□□□□ -0.6
CNGA3-201ENST00000272602 SENP1Q9P0U3 644 aa11.32□□□□□ -0.6
CNGA3-201ENST00000272602 COL20A1Q9P218 1284 aa11.32□□□□□ -0.6
CNGA3-201ENST00000272602 LGALS13Q9UHV8 139 aa11.32□□□□□ -0.6
CNGA3-201ENST00000272602 GTF3C4Q9UKN8 822 aa11.32□□□□□ -0.6
CNGA3-201ENST00000272602 PPM1HQ9ULR3 514 aa11.32□□□□□ -0.6
CNGA3-201ENST00000272602 NENFQ9UMX5 172 aa11.32□□□□□ -0.6
CNGA3-201ENST00000272602 COMMD3-BMI1R4GMX3 469 aa11.32□□□□□ -0.6
CNGA3-201ENST00000272602 C6orf222P0C671 652 aaPredicted RBP11.32□□□□□ -0.6
CNGA3-201ENST00000272602 TXNP10599 105 aaKnown RBP11.32□□□□□ -0.6
CNGA3-201ENST00000272602 NSFP46459 744 aaKnown RBP11.32□□□□□ -0.6
CNGA3-201ENST00000272602 CYP1B1Q16678 543 aa11.32□□□□□ -0.6
CNGA3-201ENST00000272602 RBM15BQ8NDT2 890 aaKnown RBP11.32□□□□□ -0.6
CNGA3-201ENST00000272602 GSTCDQ8NEC7 633 aa11.32□□□□□ -0.6
CNGA3-201ENST00000272602 FBXO27Q8NI29 283 aa11.32□□□□□ -0.6
CNGA3-201ENST00000272602 NAT14Q8WUY8 206 aa11.32□□□□□ -0.6
CNGA3-201ENST00000272602 NAP1L4Q99733 375 aaKnown RBP11.32□□□□□ -0.6
CNGA3-201ENST00000272602 CBWD1Q9BRT8 395 aa11.32□□□□□ -0.6
CNGA3-201ENST00000272602 PI4K2AQ9BTU6 479 aa11.32□□□□□ -0.6
CNGA3-201ENST00000272602 SPATC1LQ9H0A9 340 aa11.32□□□□□ -0.6
CNGA3-201ENST00000272602 KCNH7Q9NS40 1196 aa11.32□□□□□ -0.6
CNGA3-201ENST00000272602 MTO1Q9Y2Z2 717 aaKnown RBP11.32□□□□□ -0.6
CNGA3-201ENST00000272602 ACTL7BQ9Y614 415 aa11.32□□□□□ -0.6
CNGA3-201ENST00000272602 UBR3Q6ZT12 1888 aa11.31□□□□□ -0.6
CNGA3-201ENST00000272602 UMODL1Q5DID0 1318 aa11.31□□□□□ -0.6
CNGA3-201ENST00000272602 LOC100653049A0A140TA62 436 aa11.31□□□□□ -0.6
CNGA3-201ENST00000272602 EML1O00423 815 aa11.31□□□□□ -0.6
CNGA3-201ENST00000272602 KRT34O76011 436 aa11.31□□□□□ -0.6
CNGA3-201ENST00000272602 INHBAP08476 426 aa11.31□□□□□ -0.6
CNGA3-201ENST00000272602 CTSHP09668 335 aa11.31□□□□□ -0.6
CNGA3-201ENST00000272602 SPATA31C1P0DKV0 1188 aa11.31□□□□□ -0.6
CNGA3-201ENST00000272602 PSMC4P43686 418 aa11.31□□□□□ -0.6
CNGA3-201ENST00000272602 ATXN3P54252 364 aaPredicted RBP11.31□□□□□ -0.6
CNGA3-201ENST00000272602 MFAP3P55082 362 aa11.31□□□□□ -0.6
CNGA3-201ENST00000272602 BPIFB4P59827 614 aa11.31□□□□□ -0.6
CNGA3-201ENST00000272602 CDK16Q00536 496 aa11.31□□□□□ -0.6
CNGA3-201ENST00000272602 BEX3Q00994 111 aa11.31□□□□□ -0.6
CNGA3-201ENST00000272602 KIF22Q14807 665 aa11.31□□□□□ -0.6
CNGA3-201ENST00000272602 RHBDF2Q6PJF5 856 aa11.31□□□□□ -0.6
CNGA3-201ENST00000272602 MORC4Q8TE76 937 aa11.31□□□□□ -0.6
CNGA3-201ENST00000272602 OXNAD1Q96HP4 312 aaPredicted RBP11.31□□□□□ -0.6
CNGA3-201ENST00000272602 GCNAQ96QF7 691 aa11.31□□□□□ -0.6
CNGA3-201ENST00000272602 NR1H4Q96RI1 486 aaPredicted RBP11.31□□□□□ -0.6
CNGA3-201ENST00000272602 GPR88Q9GZN0 384 aa11.31□□□□□ -0.6
CNGA3-201ENST00000272602 PACSIN3Q9UKS6 424 aa11.31□□□□□ -0.6
CNGA3-201ENST00000272602 DNPEPQ9ULA0 475 aa11.31□□□□□ -0.6
CNGA3-201ENST00000272602 POLR2AP24928 1970 aaKnown RBP11.31□□□□□ -0.6
CNGA3-201ENST00000272602 GON4LQ3T8J9 2241 aa11.31□□□□□ -0.6
CNGA3-201ENST00000272602 FRMPD4Q14CM0 1322 aa11.31□□□□□ -0.6
CNGA3-201ENST00000272602 TTC36A6NLP5 189 aa11.31□□□□□ -0.6
CNGA3-201ENST00000272602 hCG_1984214I3L0E3 225 aa11.31□□□□□ -0.6
CNGA3-201ENST00000272602 DKC1O60832 514 aaKnown RBP eCLIP11.31□□□□□ -0.6
CNGA3-201ENST00000272602 IVDP26440 423 aa11.31□□□□□ -0.6
CNGA3-201ENST00000272602 PHBP35232 272 aa11.31□□□□□ -0.6
CNGA3-201ENST00000272602 NFX1Q12986 1120 aaKnown RBP11.31□□□□□ -0.6
CNGA3-201ENST00000272602 GSTA3Q16772 222 aa11.31□□□□□ -0.6
CNGA3-201ENST00000272602 TRIM42Q8IWZ5 723 aa11.31□□□□□ -0.6
CNGA3-201ENST00000272602 ZNF713Q8N859 430 aaPredicted RBP11.31□□□□□ -0.6
CNGA3-201ENST00000272602 TMEM143Q96AN5 459 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms