RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 ARRDC4Q8NCT1 418 aa16.12■□□□□ 0.17
SF3B4-201ENST00000271628 STK32AQ8WU08 396 aa16.12■□□□□ 0.17
SF3B4-201ENST00000271628 FAM129AQ9BZQ8 928 aa16.12■□□□□ 0.17
SF3B4-201ENST00000271628 SNX25Q9H3E2 840 aa16.12■□□□□ 0.17
SF3B4-201ENST00000271628 METTL5Q9NRN9 209 aaKnown RBP16.12■□□□□ 0.17
SF3B4-201ENST00000271628 TJP2Q9UDY2 1190 aa16.12■□□□□ 0.17
SF3B4-201ENST00000271628 HMGB1P1B2RPK0 211 aaPredicted RBP16.11■□□□□ 0.17
SF3B4-201ENST00000271628 HUS1O60921 280 aa16.11■□□□□ 0.17
SF3B4-201ENST00000271628 RNF8O76064 485 aa16.11■□□□□ 0.17
SF3B4-201ENST00000271628 TJP3O95049 919 aa16.11■□□□□ 0.17
SF3B4-201ENST00000271628 MYCNP04198 464 aaPredicted RBP16.11■□□□□ 0.17
SF3B4-201ENST00000271628 GJC1P36383 396 aa16.11■□□□□ 0.17
SF3B4-201ENST00000271628 CCNG2Q16589 344 aa16.11■□□□□ 0.17
SF3B4-201ENST00000271628 GOLGA7BQ2TAP0 167 aa16.11■□□□□ 0.17
SF3B4-201ENST00000271628 TOP6BLQ8N6T0 577 aa16.11■□□□□ 0.17
SF3B4-201ENST00000271628 ATL2Q8NHH9 583 aa16.11■□□□□ 0.17
SF3B4-201ENST00000271628 JOSD2Q8TAC2 188 aa16.11■□□□□ 0.17
SF3B4-201ENST00000271628 PPM1EQ8WY54 764 aa16.11■□□□□ 0.17
SF3B4-201ENST00000271628 FMO2Q99518 471 aa16.11■□□□□ 0.17
SF3B4-201ENST00000271628 TRIM31Q9BZY9 425 aa16.11■□□□□ 0.17
SF3B4-201ENST00000271628 GNRH1P01148 92 aa16.1■□□□□ 0.17
SF3B4-201ENST00000271628 CTSHP09668 335 aa16.1■□□□□ 0.17
SF3B4-201ENST00000271628 THPOP40225 353 aa16.1■□□□□ 0.17
SF3B4-201ENST00000271628 LILRA4P59901 499 aa16.1■□□□□ 0.17
SF3B4-201ENST00000271628 SOX4Q06945 474 aaPredicted RBP16.1■□□□□ 0.17
SF3B4-201ENST00000271628 MTMR3Q13615 1198 aa16.1■□□□□ 0.17
SF3B4-201ENST00000271628 PKDCCQ504Y2 493 aa16.1■□□□□ 0.17
SF3B4-201ENST00000271628 FAM102AQ5T9C2 384 aaPredicted RBP16.1■□□□□ 0.17
SF3B4-201ENST00000271628 MAP3K21Q5TCX8 1036 aa16.1■□□□□ 0.17
SF3B4-201ENST00000271628 LIMS2Q7Z4I7 341 aa16.1■□□□□ 0.17
SF3B4-201ENST00000271628 C1orf54Q8WWF1 131 aa16.1■□□□□ 0.17
SF3B4-201ENST00000271628 WNT8BQ93098 351 aa16.1■□□□□ 0.17
SF3B4-201ENST00000271628 RNF25Q96BH1 459 aaPredicted RBP16.1■□□□□ 0.17
SF3B4-201ENST00000271628 TNIP3Q96KP6 325 aa16.1■□□□□ 0.17
SF3B4-201ENST00000271628 PPP1R10Q96QC0 940 aaKnown RBP16.1■□□□□ 0.17
SF3B4-201ENST00000271628 DCLK3Q9C098 648 aa16.1■□□□□ 0.17
SF3B4-201ENST00000271628 RNF19AQ9NV58 838 aa16.1■□□□□ 0.17
SF3B4-201ENST00000271628 ASNSD1Q9NWL6 643 aa16.1■□□□□ 0.17
SF3B4-201ENST00000271628 DDX20Q9UHI6 824 aaKnown RBP16.1■□□□□ 0.17
SF3B4-201ENST00000271628 GIT1Q9Y2X7 761 aa16.1■□□□□ 0.17
SF3B4-201ENST00000271628 PTGESO14684 152 aa16.1■□□□□ 0.17
SF3B4-201ENST00000271628 PTPN7P35236 360 aa16.1■□□□□ 0.17
SF3B4-201ENST00000271628 KCNJ1P48048 391 aa16.1■□□□□ 0.17
SF3B4-201ENST00000271628 CCT5P48643 541 aa16.1■□□□□ 0.17
SF3B4-201ENST00000271628 PTK7Q13308 1070 aa16.1■□□□□ 0.17
SF3B4-201ENST00000271628 PPP1R7Q15435 360 aa16.1■□□□□ 0.17
SF3B4-201ENST00000271628 ZDHHC17Q8IUH5 632 aa16.1■□□□□ 0.17
SF3B4-201ENST00000271628 PXYLP1Q8TE99 480 aa16.1■□□□□ 0.17
SF3B4-201ENST00000271628 KBTBD7Q8WVZ9 684 aa16.1■□□□□ 0.17
SF3B4-201ENST00000271628 ATP6V1G3Q96LB4 118 aa16.1■□□□□ 0.17
SF3B4-201ENST00000271628 SLITRK1Q96PX8 696 aa16.1■□□□□ 0.17
SF3B4-201ENST00000271628 TRAIPQ9BWF2 469 aa16.1■□□□□ 0.17
SF3B4-201ENST00000271628 HEMGNQ9BXL5 484 aa16.1■□□□□ 0.17
SF3B4-201ENST00000271628 NEUROG2Q9H2A3 272 aa16.1■□□□□ 0.17
SF3B4-201ENST00000271628 CREBZFQ9NS37 354 aa16.1■□□□□ 0.17
SF3B4-201ENST00000271628 EFR3BQ9Y2G0 817 aa16.1■□□□□ 0.17
SF3B4-201ENST00000271628 GOLGA6L10A6NI86 522 aa16.09■□□□□ 0.17
SF3B4-201ENST00000271628 E5RJQ4 531 aa16.09■□□□□ 0.17
SF3B4-201ENST00000271628 SPTLC1O15269 473 aa16.09■□□□□ 0.17
SF3B4-201ENST00000271628 LRCH4O75427 683 aa16.09■□□□□ 0.17
SF3B4-201ENST00000271628 GAS8O95995 478 aa16.09■□□□□ 0.17
SF3B4-201ENST00000271628 KRT1P04264 644 aa16.09■□□□□ 0.17
SF3B4-201ENST00000271628 THP07101 528 aa16.09■□□□□ 0.17
SF3B4-201ENST00000271628 PFKMP08237 780 aa16.09■□□□□ 0.17
SF3B4-201ENST00000271628 CAP1Q01518 475 aa16.09■□□□□ 0.17
SF3B4-201ENST00000271628 LMNB2Q03252 620 aa16.09■□□□□ 0.17
SF3B4-201ENST00000271628 ITGA7Q13683 1181 aa16.09■□□□□ 0.17
SF3B4-201ENST00000271628 LLGL1Q15334 1064 aa16.09■□□□□ 0.17
SF3B4-201ENST00000271628 TFDP3Q5H9I0 405 aa16.09■□□□□ 0.17
SF3B4-201ENST00000271628 SPDYCQ5MJ68 293 aa16.09■□□□□ 0.17
SF3B4-201ENST00000271628 OR6B2Q6IFH4 312 aa16.09■□□□□ 0.17
SF3B4-201ENST00000271628 TMEM110Q86TL2 294 aa16.09■□□□□ 0.17
SF3B4-201ENST00000271628 SLC35F5Q8WV83 523 aa16.09■□□□□ 0.17
SF3B4-201ENST00000271628 SLC4A5Q9BY07 1137 aa16.09■□□□□ 0.17
SF3B4-201ENST00000271628 GOLGA2P5Q9HBQ8 144 aa16.09■□□□□ 0.17
SF3B4-201ENST00000271628 NOD1Q9Y239 953 aa16.09■□□□□ 0.17
SF3B4-201ENST00000271628 PTPN22Q9Y2R2 807 aa16.09■□□□□ 0.17
SF3B4-201ENST00000271628 SNX24Q9Y343 169 aa16.09■□□□□ 0.17
SF3B4-201ENST00000271628 DESP17661 470 aa16.09■□□□□ 0.17
SF3B4-201ENST00000271628 RAB27AP51159 221 aa16.09■□□□□ 0.17
SF3B4-201ENST00000271628 ZNF143P52747 638 aaPredicted RBP16.09■□□□□ 0.17
SF3B4-201ENST00000271628 ATP13A4Q4VNC1 1196 aa16.09■□□□□ 0.17
SF3B4-201ENST00000271628 KCTD16Q68DU8 428 aa16.09■□□□□ 0.17
SF3B4-201ENST00000271628 TTC30AQ86WT1 665 aa16.09■□□□□ 0.17
SF3B4-201ENST00000271628 EMC1Q8N766 993 aa16.09■□□□□ 0.17
SF3B4-201ENST00000271628 ANKRD52Q8NB46 1076 aa16.09■□□□□ 0.17
SF3B4-201ENST00000271628 RAET1EQ8TD07 263 aa16.09■□□□□ 0.17
SF3B4-201ENST00000271628 ZFP42Q96MM3 310 aa16.09■□□□□ 0.17
SF3B4-201ENST00000271628 TSPYL2Q9H2G4 693 aaPredicted RBP16.09■□□□□ 0.17
SF3B4-201ENST00000271628 CYLDQ9NQC7 956 aa16.09■□□□□ 0.17
SF3B4-201ENST00000271628 CHST7Q9NS84 486 aa16.09■□□□□ 0.17
SF3B4-201ENST00000271628 ZDHHC18Q9NUE0 388 aa16.09■□□□□ 0.17
SF3B4-201ENST00000271628 FAM49BQ9NUQ9 324 aa16.09■□□□□ 0.17
SF3B4-201ENST00000271628 MTRF1LQ9UGC7 380 aaKnown RBP16.09■□□□□ 0.17
SF3B4-201ENST00000271628 PLAAQ9Y263 795 aa16.09■□□□□ 0.17
SF3B4-201ENST00000271628 A0A087WUV0 522 aaPredicted RBP16.08■□□□□ 0.16
SF3B4-201ENST00000271628 SRRM3A6NNA2 597 aaPredicted RBP16.08■□□□□ 0.16
SF3B4-201ENST00000271628 ZNF623O75123 536 aa16.08■□□□□ 0.16
SF3B4-201ENST00000271628 TRPA1O75762 1119 aa16.08■□□□□ 0.16
SF3B4-201ENST00000271628 TCF4P15884 667 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms