RNA–Protein interactions for RNA: ENST00000270066.10

SMG9-201, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG9, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-201ENST00000270066 PHF20L1A8MW92 1017 aa13.81□□□□□ -0.2
SMG9-201ENST00000270066 SUPT3HB4E1H0 165 aa13.81□□□□□ -0.2
SMG9-201ENST00000270066 GOLGA8RI6L899 631 aa13.81□□□□□ -0.2
SMG9-201ENST00000270066 RAD51CO43502 376 aa13.81□□□□□ -0.2
SMG9-201ENST00000270066 CYP11B1P15538 503 aa13.81□□□□□ -0.2
SMG9-201ENST00000270066 KRT4P19013 534 aa13.81□□□□□ -0.2
SMG9-201ENST00000270066 AXLP30530 894 aa13.81□□□□□ -0.2
SMG9-201ENST00000270066 PAN2Q504Q3 1202 aaKnown RBP13.81□□□□□ -0.2
SMG9-201ENST00000270066 ZRANB3Q5FWF4 1079 aa13.81□□□□□ -0.2
SMG9-201ENST00000270066 MAP1SQ66K74 1059 aaPredicted RBP13.81□□□□□ -0.2
SMG9-201ENST00000270066 UGT3A1Q6NUS8 523 aa13.81□□□□□ -0.2
SMG9-201ENST00000270066 EFL1Q7Z2Z2 1120 aaKnown RBP13.81□□□□□ -0.2
SMG9-201ENST00000270066 ADCK2Q7Z695 626 aa13.81□□□□□ -0.2
SMG9-201ENST00000270066 FAM71DQ8N9W8 422 aa13.81□□□□□ -0.2
SMG9-201ENST00000270066 FAM161BQ96MY7 647 aa13.81□□□□□ -0.2
SMG9-201ENST00000270066 CDK5RAP1Q96SZ6 601 aaKnown RBP13.81□□□□□ -0.2
SMG9-201ENST00000270066 KCNQ5Q9NR82 932 aa13.81□□□□□ -0.2
SMG9-201ENST00000270066 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.81□□□□□ -0.2
SMG9-201ENST00000270066 KPNA1P52294 538 aaPredicted RBP13.8□□□□□ -0.2
SMG9-201ENST00000270066 EPHB3P54753 998 aa13.8□□□□□ -0.2
SMG9-201ENST00000270066 VCPP55072 806 aaKnown RBP13.8□□□□□ -0.2
SMG9-201ENST00000270066 CUL3Q13618 768 aa13.8□□□□□ -0.2
SMG9-201ENST00000270066 FIGNQ5HY92 759 aa13.8□□□□□ -0.2
SMG9-201ENST00000270066 C15orf52Q6ZUT6 534 aaKnown RBP13.8□□□□□ -0.2
SMG9-201ENST00000270066 SPATA21Q7Z572 469 aa13.8□□□□□ -0.2
SMG9-201ENST00000270066 CYFIP2Q96F07 1278 aa13.8□□□□□ -0.2
SMG9-201ENST00000270066 IL17RBQ9NRM6 502 aa13.8□□□□□ -0.2
SMG9-201ENST00000270066 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.8□□□□□ -0.2
SMG9-201ENST00000270066 SLC25A13Q9UJS0 675 aa13.8□□□□□ -0.2
SMG9-201ENST00000270066 SPDYE5A6NIY4 337 aa13.8□□□□□ -0.2
SMG9-201ENST00000270066 KRT16P08779 473 aa13.8□□□□□ -0.2
SMG9-201ENST00000270066 INSRRP14616 1297 aa13.8□□□□□ -0.2
SMG9-201ENST00000270066 IRAK1P51617 712 aa13.8□□□□□ -0.2
SMG9-201ENST00000270066 NTRK3Q16288 839 aa13.8□□□□□ -0.2
SMG9-201ENST00000270066 NFE2Q16621 373 aaPredicted RBP13.8□□□□□ -0.2
SMG9-201ENST00000270066 LONRF1Q17RB8 773 aa13.8□□□□□ -0.2
SMG9-201ENST00000270066 LY6KQ17RY6 165 aa13.8□□□□□ -0.2
SMG9-201ENST00000270066 SPDYE7PQ495Y7 208 aa13.8□□□□□ -0.2
SMG9-201ENST00000270066 APOBEC3HQ6NTF7 200 aaKnown RBP13.8□□□□□ -0.2
SMG9-201ENST00000270066 CCNI2Q6ZMN8 369 aaPredicted RBP13.8□□□□□ -0.2
SMG9-201ENST00000270066 SLC13A5Q86YT5 568 aaPredicted RBP13.8□□□□□ -0.2
SMG9-201ENST00000270066 AGR3Q8TD06 166 aa13.8□□□□□ -0.2
SMG9-201ENST00000270066 ASCC2Q9H1I8 757 aaPredicted RBP13.8□□□□□ -0.2
SMG9-201ENST00000270066 PCMTD2Q9NV79 361 aa13.8□□□□□ -0.2
SMG9-201ENST00000270066 CHCHD3Q9NX63 227 aaKnown RBP13.8□□□□□ -0.2
SMG9-201ENST00000270066 CCDC78A2IDD5 438 aa13.8□□□□□ -0.2
SMG9-201ENST00000270066 HNRNPCP07910 306 aaKnown RBP eCLIP13.8□□□□□ -0.2
SMG9-201ENST00000270066 GZMAP12544 262 aa13.8□□□□□ -0.2
SMG9-201ENST00000270066 SEC24CP53992 1094 aa13.8□□□□□ -0.2
SMG9-201ENST00000270066 TMEM259Q4ZIN3 620 aa13.8□□□□□ -0.2
SMG9-201ENST00000270066 GRAMD4Q6IC98 578 aa13.8□□□□□ -0.2
SMG9-201ENST00000270066 LRRC8EQ6NSJ5 796 aa13.8□□□□□ -0.2
SMG9-201ENST00000270066 TAF2Q6P1X5 1199 aa13.8□□□□□ -0.2
SMG9-201ENST00000270066 C3orf62Q6ZUJ4 267 aa13.8□□□□□ -0.2
SMG9-201ENST00000270066 SNX31Q8N9S9 440 aa13.8□□□□□ -0.2
SMG9-201ENST00000270066 SLC5A5Q92911 643 aa13.8□□□□□ -0.2
SMG9-201ENST00000270066 TMEM176AQ96HP8 235 aa13.8□□□□□ -0.2
SMG9-201ENST00000270066 MRIQ9BWK5 157 aa13.8□□□□□ -0.2
SMG9-201ENST00000270066 ISCUQ9H1K1 167 aa13.8□□□□□ -0.2
SMG9-201ENST00000270066 CRLS1Q9UJA2 301 aa13.8□□□□□ -0.2
SMG9-201ENST00000270066 AAR2Q9Y312 384 aaKnown RBP13.8□□□□□ -0.2
SMG9-201ENST00000270066 PCDHB12Q9Y5F1 795 aa13.8□□□□□ -0.2
SMG9-201ENST00000270066 RNF103-CHMP3A0A140T963 221 aa13.8□□□□□ -0.2
SMG9-201ENST00000270066 ADM5C9JUS6 153 aa13.8□□□□□ -0.2
SMG9-201ENST00000270066 DDR1Q08345 913 aa13.8□□□□□ -0.2
SMG9-201ENST00000270066 MFSD10Q14728 455 aa13.8□□□□□ -0.2
SMG9-201ENST00000270066 SPDYAQ5MJ70 313 aa13.8□□□□□ -0.2
SMG9-201ENST00000270066 SLC30A10Q6XR72 485 aa13.8□□□□□ -0.2
SMG9-201ENST00000270066 RRM2BQ7LG56 351 aa13.8□□□□□ -0.2
SMG9-201ENST00000270066 MMGT1Q8N4V1 131 aa13.8□□□□□ -0.2
SMG9-201ENST00000270066 SETD4Q9NVD3 440 aa13.8□□□□□ -0.2
SMG9-201ENST00000270066 STX7O15400 261 aaKnown RBP13.8□□□□□ -0.2
SMG9-201ENST00000270066 IL10P22301 178 aa13.8□□□□□ -0.2
SMG9-201ENST00000270066 COBLL1Q53SF7 1204 aa13.8□□□□□ -0.2
SMG9-201ENST00000270066 TTI2Q6NXR4 508 aa13.8□□□□□ -0.2
SMG9-201ENST00000270066 SLFN11Q7Z7L1 901 aa13.8□□□□□ -0.2
SMG9-201ENST00000270066 PRUNE1Q86TP1 453 aa13.8□□□□□ -0.2
SMG9-201ENST00000270066 REPS2Q8NFH8 660 aa13.8□□□□□ -0.2
SMG9-201ENST00000270066 STAMBPL1Q96FJ0 436 aa13.8□□□□□ -0.2
SMG9-201ENST00000270066 CEP19Q96LK0 163 aa13.8□□□□□ -0.2
SMG9-201ENST00000270066 OSMRQ99650 979 aa13.8□□□□□ -0.2
SMG9-201ENST00000270066 GLIS2Q9BZE0 524 aaPredicted RBP13.8□□□□□ -0.2
SMG9-201ENST00000270066 SEMA6BQ9H3T3 888 aa13.8□□□□□ -0.2
SMG9-201ENST00000270066 PSD3Q9NYI0 1048 aa13.8□□□□□ -0.2
SMG9-201ENST00000270066 ATP11BQ9Y2G3 1177 aa13.8□□□□□ -0.2
SMG9-201ENST00000270066 FAM95CA0A1B0GW59 222 aa13.79□□□□□ -0.2
SMG9-201ENST00000270066 FAM47DPA6NHR8 397 aa13.79□□□□□ -0.2
SMG9-201ENST00000270066 SERPIND1P05546 499 aa13.79□□□□□ -0.2
SMG9-201ENST00000270066 ADORA2AP29274 412 aa13.79□□□□□ -0.2
SMG9-201ENST00000270066 KRT72Q14CN4 511 aa13.79□□□□□ -0.2
SMG9-201ENST00000270066 PKN3Q6P5Z2 889 aa13.79□□□□□ -0.2
SMG9-201ENST00000270066 ITIH5Q86UX2 942 aa13.79□□□□□ -0.2
SMG9-201ENST00000270066 ZNF410Q86VK4 478 aa13.79□□□□□ -0.2
SMG9-201ENST00000270066 HERC6Q8IVU3 1022 aa13.79□□□□□ -0.2
SMG9-201ENST00000270066 SPIRE2Q8WWL2 714 aa13.79□□□□□ -0.2
SMG9-201ENST00000270066 CDCA5Q96FF9 252 aa13.79□□□□□ -0.2
SMG9-201ENST00000270066 P2RX7Q99572 595 aaKnown RBP13.79□□□□□ -0.2
SMG9-201ENST00000270066 PRMT1Q99873 361 aaKnown RBP13.79□□□□□ -0.2
SMG9-201ENST00000270066 AGXT2Q9BYV1 514 aa13.79□□□□□ -0.2
SMG9-201ENST00000270066 GRID1Q9ULK0 1009 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms