RNA–Protein interactions for RNA: ENST00000268383.6

CDR2-201, Transcript of cerebellar degeneration related protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDR2, Length 2,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-201ENST00000268383 LRRC71Q8N4P6 559 aa23.22■■□□□ 1.31
CDR2-201ENST00000268383 PCYT2Q99447 389 aa23.22■■□□□ 1.31
CDR2-201ENST00000268383 METTL5Q9NRN9 209 aaKnown RBP23.22■■□□□ 1.31
CDR2-201ENST00000268383 SENP1Q9P0U3 644 aa23.22■■□□□ 1.31
CDR2-201ENST00000268383 FAM155BO75949 473 aa23.22■■□□□ 1.31
CDR2-201ENST00000268383 TPBGLP0DKB5 382 aa23.22■■□□□ 1.31
CDR2-201ENST00000268383 RFX6Q8HWS3 928 aa23.22■■□□□ 1.31
CDR2-201ENST00000268383 BRSK2Q8IWQ3 736 aa23.22■■□□□ 1.31
CDR2-201ENST00000268383 ATP11CQ8NB49 1132 aa23.22■■□□□ 1.31
CDR2-201ENST00000268383 SPDL1Q96EA4 605 aa23.22■■□□□ 1.31
CDR2-201ENST00000268383 SERAC1Q96JX3 654 aa23.22■■□□□ 1.31
CDR2-201ENST00000268383 CALN1Q9BXU9 219 aa23.22■■□□□ 1.31
CDR2-201ENST00000268383 NIF3L1Q9GZT8 377 aa23.22■■□□□ 1.31
CDR2-201ENST00000268383 ARL8BQ9NVJ2 186 aa23.22■■□□□ 1.31
CDR2-201ENST00000268383 FAM189A1O60320 539 aa23.21■■□□□ 1.31
CDR2-201ENST00000268383 CALB2P22676 271 aa23.21■■□□□ 1.31
CDR2-201ENST00000268383 KDELR1P24390 212 aa23.21■■□□□ 1.31
CDR2-201ENST00000268383 PSMC1P62191 440 aaKnown RBP23.21■■□□□ 1.31
CDR2-201ENST00000268383 TRPC3Q13507 836 aa23.21■■□□□ 1.31
CDR2-201ENST00000268383 CTC1Q2NKJ3 1217 aa23.21■■□□□ 1.31
CDR2-201ENST00000268383 GNPTABQ3T906 1256 aa23.21■■□□□ 1.31
CDR2-201ENST00000268383 ADGRD1Q6QNK2 874 aa23.21■■□□□ 1.31
CDR2-201ENST00000268383 CPXM1Q96SM3 734 aa23.21■■□□□ 1.31
CDR2-201ENST00000268383 HEY2Q9UBP5 337 aa23.21■■□□□ 1.31
CDR2-201ENST00000268383 PARP14Q460N5 1801 aa23.21■■□□□ 1.31
CDR2-201ENST00000268383 KRT19P08727 400 aa23.21■■□□□ 1.31
CDR2-201ENST00000268383 KCNA3P22001 575 aa23.21■■□□□ 1.31
CDR2-201ENST00000268383 TTC17Q96AE7 1141 aa23.21■■□□□ 1.31
CDR2-201ENST00000268383 FAM111AQ96PZ2 611 aa23.21■■□□□ 1.31
CDR2-201ENST00000268383 DDX56Q9NY93 547 aaKnown RBP23.21■■□□□ 1.31
CDR2-201ENST00000268383 HMGXB4Q9UGU5 601 aa23.21■■□□□ 1.31
CDR2-201ENST00000268383 ELK3P41970 407 aa23.2■■□□□ 1.3
CDR2-201ENST00000268383 ZNF699Q32M78 642 aa23.2■■□□□ 1.3
CDR2-201ENST00000268383 TTC7BQ86TV6 843 aa23.2■■□□□ 1.3
CDR2-201ENST00000268383 BANPQ8N9N5 519 aa23.2■■□□□ 1.3
CDR2-201ENST00000268383 STK32AQ8WU08 396 aa23.2■■□□□ 1.3
CDR2-201ENST00000268383 NAF1Q96HR8 494 aaKnown RBP23.2■■□□□ 1.3
CDR2-201ENST00000268383 WRNIP1Q96S55 665 aa23.2■■□□□ 1.3
CDR2-201ENST00000268383 ACSS3Q9H6R3 686 aa23.2■■□□□ 1.3
CDR2-201ENST00000268383 MANSC1Q9H8J5 431 aa23.2■■□□□ 1.3
CDR2-201ENST00000268383 RLFQ13129 1914 aa23.2■■□□□ 1.3
CDR2-201ENST00000268383 ADCY3O60266 1144 aa23.2■■□□□ 1.3
CDR2-201ENST00000268383 ZWINTO95229 277 aa23.2■■□□□ 1.3
CDR2-201ENST00000268383 ASPAP45381 313 aa23.2■■□□□ 1.3
CDR2-201ENST00000268383 ERFP50548 548 aa23.2■■□□□ 1.3
CDR2-201ENST00000268383 SLC18A1P54219 525 aa23.2■■□□□ 1.3
CDR2-201ENST00000268383 DSTYKQ6XUX3 929 aa23.2■■□□□ 1.3
CDR2-201ENST00000268383 PAXIP1Q6ZW49 1069 aaPredicted RBP23.2■■□□□ 1.3
CDR2-201ENST00000268383 TRIM50Q86XT4 487 aa23.2■■□□□ 1.3
CDR2-201ENST00000268383 TMEM192Q8IY95 271 aa23.2■■□□□ 1.3
CDR2-201ENST00000268383 MGAMO43451 1857 aa23.2■■□□□ 1.3
CDR2-201ENST00000268383 C2CD2LO14523 706 aa23.19■■□□□ 1.3
CDR2-201ENST00000268383 ATP5HO75947 161 aa23.19■■□□□ 1.3
CDR2-201ENST00000268383 FAAP100Q0VG06 881 aa23.19■■□□□ 1.3
CDR2-201ENST00000268383 FYB2Q5VWT5 728 aa23.19■■□□□ 1.3
CDR2-201ENST00000268383 CIAPIN1Q6FI81 312 aa23.19■■□□□ 1.3
CDR2-201ENST00000268383 KCTD6Q8NC69 237 aa23.19■■□□□ 1.3
CDR2-201ENST00000268383 ZNF280CQ8ND82 737 aa23.19■■□□□ 1.3
CDR2-201ENST00000268383 INPP5DQ92835 1189 aa23.19■■□□□ 1.3
CDR2-201ENST00000268383 HACL1Q9UJ83 578 aa23.19■■□□□ 1.3
CDR2-201ENST00000268383 AFG3L2Q9Y4W6 797 aa23.19■■□□□ 1.3
CDR2-201ENST00000268383 KIF1CO43896 1103 aaKnown RBP23.19■■□□□ 1.3
CDR2-201ENST00000268383 MSCO60682 206 aa23.19■■□□□ 1.3
CDR2-201ENST00000268383 ERBB2P04626 1255 aa23.19■■□□□ 1.3
CDR2-201ENST00000268383 BGNP21810 368 aa23.19■■□□□ 1.3
CDR2-201ENST00000268383 PHBP35232 272 aa23.19■■□□□ 1.3
CDR2-201ENST00000268383 EIF3EP60228 445 aaKnown RBP23.19■■□□□ 1.3
CDR2-201ENST00000268383 PRKG1Q13976 671 aa23.19■■□□□ 1.3
CDR2-201ENST00000268383 KBTBD12Q3ZCT8 623 aa23.19■■□□□ 1.3
CDR2-201ENST00000268383 KHDC1Q4VXA5 237 aaKnown RBP23.19■■□□□ 1.3
CDR2-201ENST00000268383 FAXCQ5TGI0 409 aa23.19■■□□□ 1.3
CDR2-201ENST00000268383 TRIM6Q9C030 488 aaPredicted RBP23.19■■□□□ 1.3
CDR2-201ENST00000268383 SYNCQ9H7C4 482 aa23.19■■□□□ 1.3
CDR2-201ENST00000268383 ACAD9Q9H845 621 aa23.19■■□□□ 1.3
CDR2-201ENST00000268383 LSM8O95777 96 aaKnown RBP23.18■■□□□ 1.3
CDR2-201ENST00000268383 PDHA1P08559 390 aa23.18■■□□□ 1.3
CDR2-201ENST00000268383 RBP3P10745 1247 aa23.18■■□□□ 1.3
CDR2-201ENST00000268383 NEFHP12036 1026 aa23.18■■□□□ 1.3
CDR2-201ENST00000268383 SERPINB3P29508 390 aa23.18■■□□□ 1.3
CDR2-201ENST00000268383 WDR49Q8IV35 697 aa23.18■■□□□ 1.3
CDR2-201ENST00000268383 CDHR1Q96JP9 859 aa23.18■■□□□ 1.3
CDR2-201ENST00000268383 TWNKQ96RR1 684 aa23.18■■□□□ 1.3
CDR2-201ENST00000268383 CADM1Q9BY67 442 aaKnown RBP23.18■■□□□ 1.3
CDR2-201ENST00000268383 LPXNO60711 386 aa23.18■■□□□ 1.3
CDR2-201ENST00000268383 WFS1O76024 890 aa23.18■■□□□ 1.3
CDR2-201ENST00000268383 ATG7O95352 703 aa23.18■■□□□ 1.3
CDR2-201ENST00000268383 PTPRAP18433 802 aa23.18■■□□□ 1.3
CDR2-201ENST00000268383 DUOXA2Q1HG44 320 aa23.18■■□□□ 1.3
CDR2-201ENST00000268383 SLC45A4Q5BKX6 768 aa23.18■■□□□ 1.3
CDR2-201ENST00000268383 RFX8Q6ZV50 586 aa23.18■■□□□ 1.3
CDR2-201ENST00000268383 PRPF39Q86UA1 669 aaKnown RBP23.18■■□□□ 1.3
CDR2-201ENST00000268383 ASCC2Q9H1I8 757 aaPredicted RBP23.18■■□□□ 1.3
CDR2-201ENST00000268383 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.18■■□□□ 1.3
CDR2-201ENST00000268383 KBTBD13C9JR72 458 aa23.17■■□□□ 1.3
CDR2-201ENST00000268383 B4GALT5O43286 388 aa23.17■■□□□ 1.3
CDR2-201ENST00000268383 CSDE1O75534 798 aaKnown RBP23.17■■□□□ 1.3
CDR2-201ENST00000268383 PYGBP11216 843 aa23.17■■□□□ 1.3
CDR2-201ENST00000268383 PTPN7P35236 360 aa23.17■■□□□ 1.3
CDR2-201ENST00000268383 PTDSS1P48651 473 aaKnown RBP23.17■■□□□ 1.3
CDR2-201ENST00000268383 YWHAGP61981 247 aaKnown RBP eCLIP23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms