RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 TMED2Q15363 201 aa15.16■□□□□ 0.02
PDLIM2-201ENST00000265810 NFE2Q16621 373 aaPredicted RBP15.16■□□□□ 0.02
PDLIM2-201ENST00000265810 PTPN18Q99952 460 aa15.16■□□□□ 0.02
PDLIM2-201ENST00000265810 TUBGCP4Q9UGJ1 667 aa15.16■□□□□ 0.02
PDLIM2-201ENST00000265810 EDIL3O43854 480 aa15.16■□□□□ 0.02
PDLIM2-201ENST00000265810 SERPINB6P35237 376 aa15.16■□□□□ 0.02
PDLIM2-201ENST00000265810 GNGT1P63211 74 aa15.16■□□□□ 0.02
PDLIM2-201ENST00000265810 CAV1Q03135 178 aa15.16■□□□□ 0.02
PDLIM2-201ENST00000265810 JAMLQ86YT9 394 aa15.16■□□□□ 0.02
PDLIM2-201ENST00000265810 ARHGAP39Q9C0H5 1083 aa15.16■□□□□ 0.02
PDLIM2-201ENST00000265810 H7C4K7 107 aa15.15■□□□□ 0.02
PDLIM2-201ENST00000265810 HGSO14964 777 aaPredicted RBP15.15■□□□□ 0.02
PDLIM2-201ENST00000265810 MAP3K6O95382 1288 aa15.15■□□□□ 0.02
PDLIM2-201ENST00000265810 NNTQ13423 1086 aa15.15■□□□□ 0.02
PDLIM2-201ENST00000265810 BTG3Q14201 252 aaPredicted RBP15.15■□□□□ 0.02
PDLIM2-201ENST00000265810 C10orf120Q5SQS8 335 aa15.15■□□□□ 0.02
PDLIM2-201ENST00000265810 ATG4AQ8WYN0 398 aa15.15■□□□□ 0.02
PDLIM2-201ENST00000265810 CHST12Q9NRB3 414 aa15.15■□□□□ 0.02
PDLIM2-201ENST00000265810 NOVA2Q9UNW9 492 aaKnown RBP15.15■□□□□ 0.02
PDLIM2-201ENST00000265810 E5RJQ4 531 aa15.15■□□□□ 0.02
PDLIM2-201ENST00000265810 ALDH3A1P30838 453 aa15.15■□□□□ 0.02
PDLIM2-201ENST00000265810 ADIGQ0VDE8 80 aa15.15■□□□□ 0.02
PDLIM2-201ENST00000265810 ELAVL2Q12926 359 aaKnown RBP15.15■□□□□ 0.02
PDLIM2-201ENST00000265810 IKBKEQ14164 716 aa15.15■□□□□ 0.02
PDLIM2-201ENST00000265810 ZNF268Q14587 947 aaPredicted RBP15.15■□□□□ 0.02
PDLIM2-201ENST00000265810 C1orf127Q8N9H9 656 aa15.15■□□□□ 0.02
PDLIM2-201ENST00000265810 ARAP2Q8WZ64 1704 aa15.15■□□□□ 0.02
PDLIM2-201ENST00000265810 CNGA2Q16280 664 aa15.15■□□□□ 0.02
PDLIM2-201ENST00000265810 CFAP157Q5JU67 520 aa15.15■□□□□ 0.02
PDLIM2-201ENST00000265810 C11orf63Q6NUN7 778 aa15.15■□□□□ 0.02
PDLIM2-201ENST00000265810 MMGT1Q8N4V1 131 aa15.15■□□□□ 0.02
PDLIM2-201ENST00000265810 REXO2Q9Y3B8 237 aaKnown RBP15.15■□□□□ 0.02
PDLIM2-201ENST00000265810 CCND3P30281 292 aaPredicted RBP15.14■□□□□ 0.01
PDLIM2-201ENST00000265810 PMS2P54278 862 aa15.14■□□□□ 0.01
PDLIM2-201ENST00000265810 HGSNATQ68CP4 663 aa15.14■□□□□ 0.01
PDLIM2-201ENST00000265810 MIB1Q86YT6 1006 aa15.14■□□□□ 0.01
PDLIM2-201ENST00000265810 C12orf29Q8N999 325 aa15.14■□□□□ 0.01
PDLIM2-201ENST00000265810 WDCPQ9H6R7 721 aa15.14■□□□□ 0.01
PDLIM2-201ENST00000265810 USP18Q9UMW8 372 aa15.14■□□□□ 0.01
PDLIM2-201ENST00000265810 PPP1R12AO14974 1030 aaPredicted RBP15.14■□□□□ 0.01
PDLIM2-201ENST00000265810 CARSP49589 748 aaKnown RBP15.14■□□□□ 0.01
PDLIM2-201ENST00000265810 ACLYP53396 1101 aa15.14■□□□□ 0.01
PDLIM2-201ENST00000265810 CCNI2Q6ZMN8 369 aaPredicted RBP15.14■□□□□ 0.01
PDLIM2-201ENST00000265810 UNC93AQ86WB7 457 aa15.14■□□□□ 0.01
PDLIM2-201ENST00000265810 TTYH3Q9C0H2 523 aa15.14■□□□□ 0.01
PDLIM2-201ENST00000265810 GIT1Q9Y2X7 761 aa15.14■□□□□ 0.01
PDLIM2-201ENST00000265810 SBF2Q86WG5 1849 aa15.14■□□□□ 0.01
PDLIM2-201ENST00000265810 A0A1B0GUA9 196 aa15.14■□□□□ 0.01
PDLIM2-201ENST00000265810 PPP1R37O75864 691 aa15.14■□□□□ 0.01
PDLIM2-201ENST00000265810 PTPN1P18031 435 aaKnown RBP15.14■□□□□ 0.01
PDLIM2-201ENST00000265810 EIF3BP55884 814 aaKnown RBP15.14■□□□□ 0.01
PDLIM2-201ENST00000265810 PDIA2Q13087 525 aaKnown RBP15.14■□□□□ 0.01
PDLIM2-201ENST00000265810 P3H1Q32P28 736 aa15.14■□□□□ 0.01
PDLIM2-201ENST00000265810 SLC10A6Q3KNW5 377 aa15.14■□□□□ 0.01
PDLIM2-201ENST00000265810 FBXO32Q969P5 355 aa15.14■□□□□ 0.01
PDLIM2-201ENST00000265810 AVENQ9NQS1 362 aaPredicted RBP15.14■□□□□ 0.01
PDLIM2-201ENST00000265810 IFNAR2P48551 515 aa15.14■□□□□ 0.01
PDLIM2-201ENST00000265810 EPHB1P54762 984 aa15.14■□□□□ 0.01
PDLIM2-201ENST00000265810 GEN1Q17RS7 908 aa15.14■□□□□ 0.01
PDLIM2-201ENST00000265810 NOMO2Q5JPE7 1267 aa15.14■□□□□ 0.01
PDLIM2-201ENST00000265810 TADA2BQ86TJ2 420 aa15.14■□□□□ 0.01
PDLIM2-201ENST00000265810 NT5DC3Q86UY8 548 aa15.14■□□□□ 0.01
PDLIM2-201ENST00000265810 TMEM192Q8IY95 271 aa15.14■□□□□ 0.01
PDLIM2-201ENST00000265810 DPF3Q92784 378 aa15.14■□□□□ 0.01
PDLIM2-201ENST00000265810 SMC6Q96SB8 1091 aa15.14■□□□□ 0.01
PDLIM2-201ENST00000265810 FTHL17Q9BXU8 183 aa15.14■□□□□ 0.01
PDLIM2-201ENST00000265810 SP110Q9HB58 689 aa15.14■□□□□ 0.01
PDLIM2-201ENST00000265810 HPCAL4Q9UM19 191 aa15.14■□□□□ 0.01
PDLIM2-201ENST00000265810 Q9Y3F1 56 aa15.14■□□□□ 0.01
PDLIM2-201ENST00000265810 LAMA4Q16363 1823 aa15.13■□□□□ 0.01
PDLIM2-201ENST00000265810 DNAJC25-GNG10A0A024R161 153 aa15.13■□□□□ 0.01
PDLIM2-201ENST00000265810 BDNFP23560 247 aa15.13■□□□□ 0.01
PDLIM2-201ENST00000265810 EPHB2P29323 1055 aa15.13■□□□□ 0.01
PDLIM2-201ENST00000265810 COILP38432 576 aaPredicted RBP15.13■□□□□ 0.01
PDLIM2-201ENST00000265810 MAMDC4Q6UXC1 1216 aa15.13■□□□□ 0.01
PDLIM2-201ENST00000265810 ZBED8Q8IZ13 594 aa15.13■□□□□ 0.01
PDLIM2-201ENST00000265810 LRRC52Q8N7C0 313 aa15.13■□□□□ 0.01
PDLIM2-201ENST00000265810 EDEM1Q92611 657 aa15.13■□□□□ 0.01
PDLIM2-201ENST00000265810 F2P00734 622 aa15.13■□□□□ 0.01
PDLIM2-201ENST00000265810 URODP06132 367 aa15.13■□□□□ 0.01
PDLIM2-201ENST00000265810 PDCLQ13371 301 aa15.13■□□□□ 0.01
PDLIM2-201ENST00000265810 C9orf57Q5W0N0 161 aa15.13■□□□□ 0.01
PDLIM2-201ENST00000265810 C17orf99Q6UX52 265 aa15.13■□□□□ 0.01
PDLIM2-201ENST00000265810 CAPS2Q9BXY5 557 aa15.13■□□□□ 0.01
PDLIM2-201ENST00000265810 MRPL9Q9BYD2 267 aaKnown RBP15.13■□□□□ 0.01
PDLIM2-201ENST00000265810 TRPV6Q9H1D0 765 aa15.13■□□□□ 0.01
PDLIM2-201ENST00000265810 CALCOCO1Q9P1Z2 691 aa15.13■□□□□ 0.01
PDLIM2-201ENST00000265810 IPO11Q9UI26 975 aaKnown RBP15.13■□□□□ 0.01
PDLIM2-201ENST00000265810 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.13■□□□□ 0.01
PDLIM2-201ENST00000265810 MYH8P13535 1937 aa15.13■□□□□ 0.01
PDLIM2-201ENST00000265810 ZNF831Q5JPB2 1677 aa15.13■□□□□ 0.01
PDLIM2-201ENST00000265810 TMEM86AQ8N2M4 240 aa15.13■□□□□ 0.01
PDLIM2-201ENST00000265810 FSD1LQ9BXM9 530 aa15.13■□□□□ 0.01
PDLIM2-201ENST00000265810 HIPK3Q9H422 1215 aa15.13■□□□□ 0.01
PDLIM2-201ENST00000265810 RAB6BQ9NRW1 208 aa15.13■□□□□ 0.01
PDLIM2-201ENST00000265810 CREBZFQ9NS37 354 aa15.13■□□□□ 0.01
PDLIM2-201ENST00000265810 GHRHRQ02643 423 aa15.12■□□□□ 0.01
PDLIM2-201ENST00000265810 POU5F1BQ06416 359 aa15.12■□□□□ 0.01
PDLIM2-201ENST00000265810 TARBP2Q15633 366 aaKnown RBP15.12■□□□□ 0.01
PDLIM2-201ENST00000265810 SLC39A4Q6P5W5 647 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms