RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 ERMNQ8TAM6 284 aa9.18□□□□□ -0.94
VAPB-201ENST00000265619 PLEKHO2Q8TD55 490 aa9.18□□□□□ -0.94
VAPB-201ENST00000265619 HSPH1Q92598 858 aa9.18□□□□□ -0.94
VAPB-201ENST00000265619 CEP63Q96MT8 703 aa9.18□□□□□ -0.94
VAPB-201ENST00000265619 TRAIPQ9BWF2 469 aa9.18□□□□□ -0.94
VAPB-201ENST00000265619 TMEM39BQ9GZU3 492 aa9.18□□□□□ -0.94
VAPB-201ENST00000265619 SACM1LQ9NTJ5 587 aa9.18□□□□□ -0.94
VAPB-201ENST00000265619 KAT6AQ92794 2004 aa9.18□□□□□ -0.94
VAPB-201ENST00000265619 FRMPD4Q14CM0 1322 aa9.17□□□□□ -0.94
VAPB-201ENST00000265619 GSTTP1A0A1W2PQM5 241 aa9.17□□□□□ -0.94
VAPB-201ENST00000265619 DGKIO75912 1065 aa9.17□□□□□ -0.94
VAPB-201ENST00000265619 GH2P01242 217 aa9.17□□□□□ -0.94
VAPB-201ENST00000265619 THRAP10827 490 aa9.17□□□□□ -0.94
VAPB-201ENST00000265619 MAGEA4P43358 317 aa9.17□□□□□ -0.94
VAPB-201ENST00000265619 EPHB1P54762 984 aa9.17□□□□□ -0.94
VAPB-201ENST00000265619 GAD2Q05329 585 aa9.17□□□□□ -0.94
VAPB-201ENST00000265619 ATP1A4Q13733 1029 aa9.17□□□□□ -0.94
VAPB-201ENST00000265619 PDE1CQ14123 709 aaPredicted RBP9.17□□□□□ -0.94
VAPB-201ENST00000265619 TRMT5Q32P41 509 aaKnown RBP9.17□□□□□ -0.94
VAPB-201ENST00000265619 SGO2Q562F6 1265 aa9.17□□□□□ -0.94
VAPB-201ENST00000265619 C6orf52Q5T4I8 152 aa9.17□□□□□ -0.94
VAPB-201ENST00000265619 SEL1L2Q5TEA6 688 aa9.17□□□□□ -0.94
VAPB-201ENST00000265619 STYK1Q6J9G0 422 aa9.17□□□□□ -0.94
VAPB-201ENST00000265619 POTEHQ6S545 545 aa9.17□□□□□ -0.94
VAPB-201ENST00000265619 SAMD7Q7Z3H4 446 aa9.17□□□□□ -0.94
VAPB-201ENST00000265619 GBA3Q9H227 469 aa9.17□□□□□ -0.94
VAPB-201ENST00000265619 SIAEQ9HAT2 523 aa9.17□□□□□ -0.94
VAPB-201ENST00000265619 XPNPEP1Q9NQW7 623 aa9.17□□□□□ -0.94
VAPB-201ENST00000265619 FADS3Q9Y5Q0 445 aa9.17□□□□□ -0.94
VAPB-201ENST00000265619 MAD1L1Q9Y6D9 718 aa9.17□□□□□ -0.94
VAPB-201ENST00000265619 PRR5-ARHGAP8B1AHC4 643 aa9.17□□□□□ -0.94
VAPB-201ENST00000265619 HNRNPCL1O60812 293 aaKnown RBP9.17□□□□□ -0.94
VAPB-201ENST00000265619 TRPA1O75762 1119 aa9.17□□□□□ -0.94
VAPB-201ENST00000265619 ZSCAN5DPP0CG00 497 aa9.17□□□□□ -0.94
VAPB-201ENST00000265619 ETS1P14921 441 aa9.17□□□□□ -0.94
VAPB-201ENST00000265619 CD1EP15812 388 aa9.17□□□□□ -0.94
VAPB-201ENST00000265619 RAG1P15918 1043 aa9.17□□□□□ -0.94
VAPB-201ENST00000265619 CIITAP33076 1130 aa9.17□□□□□ -0.94
VAPB-201ENST00000265619 CPOXP36551 454 aa9.17□□□□□ -0.94
VAPB-201ENST00000265619 TNNI2P48788 182 aa9.17□□□□□ -0.94
VAPB-201ENST00000265619 ARHGAP8P85298 464 aa9.17□□□□□ -0.94
VAPB-201ENST00000265619 CDKL1Q00532 357 aa9.17□□□□□ -0.94
VAPB-201ENST00000265619 LMNB2Q03252 620 aa9.17□□□□□ -0.94
VAPB-201ENST00000265619 DMPKQ09013 629 aa9.17□□□□□ -0.94
VAPB-201ENST00000265619 KRT72Q14CN4 511 aa9.17□□□□□ -0.94
VAPB-201ENST00000265619 CYTH1Q15438 398 aa9.17□□□□□ -0.94
VAPB-201ENST00000265619 HERC4Q5GLZ8 1057 aaPredicted RBP9.17□□□□□ -0.94
VAPB-201ENST00000265619 GALNT4Q8N4A0 578 aa9.17□□□□□ -0.94
VAPB-201ENST00000265619 SLC35C1Q96A29 364 aa9.17□□□□□ -0.94
VAPB-201ENST00000265619 DCUN1D5Q9BTE7 237 aa9.17□□□□□ -0.94
VAPB-201ENST00000265619 TSSK1BQ9BXA7 367 aa9.17□□□□□ -0.94
VAPB-201ENST00000265619 HEMGNQ9BXL5 484 aa9.17□□□□□ -0.94
VAPB-201ENST00000265619 TRIM55Q9BYV6 548 aa9.17□□□□□ -0.94
VAPB-201ENST00000265619 MANSC1Q9H8J5 431 aa9.17□□□□□ -0.94
VAPB-201ENST00000265619 SAYSD1Q9NPB0 183 aa9.17□□□□□ -0.94
VAPB-201ENST00000265619 MARCOQ9UEW3 520 aaPredicted RBP9.17□□□□□ -0.94
VAPB-201ENST00000265619 EMSYQ7Z589 1322 aa9.17□□□□□ -0.94
VAPB-201ENST00000265619 H3BNX3 289 aa9.17□□□□□ -0.94
VAPB-201ENST00000265619 WDR46O15213 610 aaKnown RBP9.17□□□□□ -0.94
VAPB-201ENST00000265619 FKBP6O75344 327 aa9.17□□□□□ -0.94
VAPB-201ENST00000265619 FTLP02792 175 aaPredicted RBP9.17□□□□□ -0.94
VAPB-201ENST00000265619 CALM1P0DP23 149 aa9.17□□□□□ -0.94
VAPB-201ENST00000265619 CALM2P0DP24 149 aa9.17□□□□□ -0.94
VAPB-201ENST00000265619 CALM3P0DP25 149 aa9.17□□□□□ -0.94
VAPB-201ENST00000265619 KITP10721 976 aa9.17□□□□□ -0.94
VAPB-201ENST00000265619 SOX5P35711 763 aa9.17□□□□□ -0.94
VAPB-201ENST00000265619 FDFT1P37268 417 aa9.17□□□□□ -0.94
VAPB-201ENST00000265619 TMED10P49755 219 aaKnown RBP9.17□□□□□ -0.94
VAPB-201ENST00000265619 SLC5A3P53794 718 aa9.17□□□□□ -0.94
VAPB-201ENST00000265619 TCHHL1Q5QJ38 904 aaPredicted RBP9.17□□□□□ -0.94
VAPB-201ENST00000265619 NANOGP8Q6NSW7 305 aa9.17□□□□□ -0.94
VAPB-201ENST00000265619 NEPROQ6NW34 567 aa9.17□□□□□ -0.94
VAPB-201ENST00000265619 VASH1Q7L8A9 365 aaPredicted RBP9.17□□□□□ -0.94
VAPB-201ENST00000265619 ANKS1BQ7Z6G8 1248 aa9.17□□□□□ -0.94
VAPB-201ENST00000265619 ZNF713Q8N859 430 aaPredicted RBP9.17□□□□□ -0.94
VAPB-201ENST00000265619 MTMR9Q96QG7 549 aa9.17□□□□□ -0.94
VAPB-201ENST00000265619 SPZ1Q9BXG8 430 aa9.17□□□□□ -0.94
VAPB-201ENST00000265619 LRRC19Q9H756 370 aa9.17□□□□□ -0.94
VAPB-201ENST00000265619 MAD2L2Q9UI95 211 aa9.17□□□□□ -0.94
VAPB-201ENST00000265619 PEX1O43933 1283 aa9.16□□□□□ -0.94
VAPB-201ENST00000265619 KRT38O76015 456 aa9.16□□□□□ -0.94
VAPB-201ENST00000265619 CRTAMO95727 393 aa9.16□□□□□ -0.94
VAPB-201ENST00000265619 EGFRP00533 1210 aa9.16□□□□□ -0.94
VAPB-201ENST00000265619 ITIH2P19823 946 aa9.16□□□□□ -0.94
VAPB-201ENST00000265619 EIF2B2P49770 351 aaKnown RBP9.16□□□□□ -0.94
VAPB-201ENST00000265619 BCAP31P51572 246 aa9.16□□□□□ -0.94
VAPB-201ENST00000265619 SH3BGRP55822 239 aaPredicted RBP9.16□□□□□ -0.94
VAPB-201ENST00000265619 APOFQ13790 326 aa9.16□□□□□ -0.94
VAPB-201ENST00000265619 UBE2SQ16763 222 aa9.16□□□□□ -0.94
VAPB-201ENST00000265619 PUS10Q3MIT2 529 aaKnown RBP9.16□□□□□ -0.94
VAPB-201ENST00000265619 STRIP1Q5VSL9 837 aa9.16□□□□□ -0.94
VAPB-201ENST00000265619 C16orf87Q6PH81 154 aa9.16□□□□□ -0.94
VAPB-201ENST00000265619 PACS1Q6VY07 963 aa9.16□□□□□ -0.94
VAPB-201ENST00000265619 DCDC5Q6ZRR9 648 aa9.16□□□□□ -0.94
VAPB-201ENST00000265619 VPS36Q86VN1 386 aa9.16□□□□□ -0.94
VAPB-201ENST00000265619 CASP10Q92851 521 aa9.16□□□□□ -0.94
VAPB-201ENST00000265619 MECRQ9BV79 373 aa9.16□□□□□ -0.94
VAPB-201ENST00000265619 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.16□□□□□ -0.94
VAPB-201ENST00000265619 MAN1C1Q9NR34 630 aa9.16□□□□□ -0.94
VAPB-201ENST00000265619 ATAD3AQ9NVI7 634 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms