RNA–Protein interactions for RNA: ENST00000265164.6

CASP6-201, Transcript of caspase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP6, Length 1,548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6-201ENST00000265164 HCFC1R1Q9NWW0 138 aa21.14■□□□□ 0.97
CASP6-201ENST00000265164 ZKSCAN5Q9Y2L8 839 aa21.14■□□□□ 0.97
CASP6-201ENST00000265164 VPS13AQ96RL7 3174 aa21.13■□□□□ 0.97
CASP6-201ENST00000265164 PIRO00625 290 aa21.13■□□□□ 0.97
CASP6-201ENST00000265164 SYN3O14994 580 aa21.13■□□□□ 0.97
CASP6-201ENST00000265164 GFPT2O94808 682 aa21.13■□□□□ 0.97
CASP6-201ENST00000265164 SERPING1P05155 500 aa21.13■□□□□ 0.97
CASP6-201ENST00000265164 LAMP2P13473 410 aa21.13■□□□□ 0.97
CASP6-201ENST00000265164 P4HA1P13674 534 aa21.13■□□□□ 0.97
CASP6-201ENST00000265164 AVPR2P30518 371 aa21.13■□□□□ 0.97
CASP6-201ENST00000265164 LRPAP1P30533 357 aa21.13■□□□□ 0.97
CASP6-201ENST00000265164 HOXA9P31269 272 aa21.13■□□□□ 0.97
CASP6-201ENST00000265164 HOXD11P31277 338 aaPredicted RBP21.13■□□□□ 0.97
CASP6-201ENST00000265164 MRPL58Q14197 206 aaKnown RBP21.13■□□□□ 0.97
CASP6-201ENST00000265164 WDR72Q3MJ13 1102 aa21.13■□□□□ 0.97
CASP6-201ENST00000265164 IRF2BP2Q7Z5L9 587 aa21.13■□□□□ 0.97
CASP6-201ENST00000265164 SUSD3Q96L08 255 aa21.13■□□□□ 0.97
CASP6-201ENST00000265164 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.13■□□□□ 0.97
CASP6-201ENST00000265164 IGSF9Q9P2J2 1179 aa21.13■□□□□ 0.97
CASP6-201ENST00000265164 NXF1Q9UBU9 619 aaKnown RBP21.13■□□□□ 0.97
CASP6-201ENST00000265164 BZW2Q9Y6E2 419 aaKnown RBP21.13■□□□□ 0.97
CASP6-201ENST00000265164 SOWAHDA6NJG2 315 aa21.12■□□□□ 0.97
CASP6-201ENST00000265164 PNMA6AP0CW24 399 aaPredicted RBP21.12■□□□□ 0.97
CASP6-201ENST00000265164 FSHRP23945 695 aa21.12■□□□□ 0.97
CASP6-201ENST00000265164 PNPLA4P41247 253 aa21.12■□□□□ 0.97
CASP6-201ENST00000265164 ARPP19P56211 112 aa21.12■□□□□ 0.97
CASP6-201ENST00000265164 KLHL30Q0D2K2 578 aa21.12■□□□□ 0.97
CASP6-201ENST00000265164 GPIHBP1Q8IV16 184 aa21.12■□□□□ 0.97
CASP6-201ENST00000265164 FAM71AQ8IYT1 594 aa21.12■□□□□ 0.97
CASP6-201ENST00000265164 ARID3AQ99856 593 aa21.12■□□□□ 0.97
CASP6-201ENST00000265164 PPEF2O14830 753 aa21.11■□□□□ 0.97
CASP6-201ENST00000265164 ABLIM3O94929 683 aa21.11■□□□□ 0.97
CASP6-201ENST00000265164 USP8P40818 1118 aa21.11■□□□□ 0.97
CASP6-201ENST00000265164 PRKCIP41743 596 aa21.11■□□□□ 0.97
CASP6-201ENST00000265164 TCF15Q12870 199 aa21.11■□□□□ 0.97
CASP6-201ENST00000265164 TDRD12Q587J7 1177 aaKnown RBP21.11■□□□□ 0.97
CASP6-201ENST00000265164 HGSNATQ68CP4 663 aa21.11■□□□□ 0.97
CASP6-201ENST00000265164 ZNF461Q8TAF7 563 aa21.11■□□□□ 0.97
CASP6-201ENST00000265164 ITFG1Q8TB96 612 aa21.11■□□□□ 0.97
CASP6-201ENST00000265164 ZNF560Q96MR9 790 aa21.11■□□□□ 0.97
CASP6-201ENST00000265164 NHEJ1Q9H9Q4 299 aaPredicted RBP21.11■□□□□ 0.97
CASP6-201ENST00000265164 ARHGAP20Q9P2F6 1191 aa21.11■□□□□ 0.97
CASP6-201ENST00000265164 DNMT3BQ9UBC3 853 aaKnown RBP21.11■□□□□ 0.97
CASP6-201ENST00000265164 PYCARDQ9ULZ3 195 aa21.11■□□□□ 0.97
CASP6-201ENST00000265164 TSC2P49815 1807 aa21.11■□□□□ 0.97
CASP6-201ENST00000265164 XYLBO75191 536 aa21.1■□□□□ 0.97
CASP6-201ENST00000265164 KRT5P13647 590 aa21.1■□□□□ 0.97
CASP6-201ENST00000265164 ASPAP45381 313 aa21.1■□□□□ 0.97
CASP6-201ENST00000265164 YWHAEP62258 255 aaKnown RBP21.1■□□□□ 0.97
CASP6-201ENST00000265164 SMYD5Q6GMV2 418 aa21.1■□□□□ 0.97
CASP6-201ENST00000265164 ZSCAN30Q86W11 494 aa21.1■□□□□ 0.97
CASP6-201ENST00000265164 CCDC170Q8IYT3 715 aa21.1■□□□□ 0.97
CASP6-201ENST00000265164 SLC44A3Q8N4M1 653 aa21.1■□□□□ 0.97
CASP6-201ENST00000265164 TMEM105Q8N8V8 129 aa21.1■□□□□ 0.97
CASP6-201ENST00000265164 SSU72P8A0A1W2PR75 194 aa21.09■□□□□ 0.97
CASP6-201ENST00000265164 EIF4A3P38919 411 aaKnown RBP21.09■□□□□ 0.97
CASP6-201ENST00000265164 TAF6P49848 677 aa21.09■□□□□ 0.97
CASP6-201ENST00000265164 TNNC1P63316 161 aa21.09■□□□□ 0.97
CASP6-201ENST00000265164 CTXN3Q4LDR2 81 aa21.09■□□□□ 0.97
CASP6-201ENST00000265164 RAD9BQ6WBX8 426 aa21.09■□□□□ 0.97
CASP6-201ENST00000265164 CCDC42Q96M95 316 aa21.09■□□□□ 0.97
CASP6-201ENST00000265164 BCO2Q9BYV7 579 aa21.09■□□□□ 0.97
CASP6-201ENST00000265164 HAUS4Q9H6D7 363 aa21.09■□□□□ 0.97
CASP6-201ENST00000265164 CYP3A43Q9HB55 503 aa21.09■□□□□ 0.97
CASP6-201ENST00000265164 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.09■□□□□ 0.97
CASP6-201ENST00000265164 PCDHB8Q9UN66 801 aa21.09■□□□□ 0.97
CASP6-201ENST00000265164 PCDHB4Q9Y5E5 795 aa21.09■□□□□ 0.97
CASP6-201ENST00000265164 TIMM13Q9Y5L4 95 aaPredicted RBP21.09■□□□□ 0.97
CASP6-201ENST00000265164 NUMBLQ9Y6R0 609 aa21.09■□□□□ 0.97
CASP6-201ENST00000265164 SCN1AP35498 2009 aa21.09■□□□□ 0.97
CASP6-201ENST00000265164 ANHXE9PGG2 379 aa21.09■□□□□ 0.97
CASP6-201ENST00000265164 H7C4K7 107 aa21.09■□□□□ 0.97
CASP6-201ENST00000265164 M0QZQ0 153 aa21.09■□□□□ 0.97
CASP6-201ENST00000265164 CYP26A1O43174 497 aa21.09■□□□□ 0.97
CASP6-201ENST00000265164 SEC24AO95486 1093 aa21.09■□□□□ 0.97
CASP6-201ENST00000265164 PLEKP08567 350 aaPredicted RBP21.09■□□□□ 0.97
CASP6-201ENST00000265164 CFHP08603 1231 aa21.09■□□□□ 0.97
CASP6-201ENST00000265164 POU2F2P09086 479 aa21.09■□□□□ 0.97
CASP6-201ENST00000265164 ATF2P15336 505 aa21.09■□□□□ 0.97
CASP6-201ENST00000265164 ACO1P21399 889 aaKnown RBP21.09■□□□□ 0.97
CASP6-201ENST00000265164 CYLC1P35663 651 aaPredicted RBP21.09■□□□□ 0.97
CASP6-201ENST00000265164 AARSP49588 968 aaKnown RBP eCLIP21.09■□□□□ 0.97
CASP6-201ENST00000265164 MAPK8IP2Q13387 824 aaPredicted RBP21.09■□□□□ 0.97
CASP6-201ENST00000265164 HTR4Q13639 388 aa21.09■□□□□ 0.97
CASP6-201ENST00000265164 MTF1Q14872 753 aa21.09■□□□□ 0.97
CASP6-201ENST00000265164 CWF19L1Q69YN2 538 aaKnown RBP21.09■□□□□ 0.97
CASP6-201ENST00000265164 SCARA5Q6ZMJ2 495 aa21.09■□□□□ 0.97
CASP6-201ENST00000265164 FGF13Q92913 245 aa21.09■□□□□ 0.97
CASP6-201ENST00000265164 FGF14Q92915 247 aa21.09■□□□□ 0.97
CASP6-201ENST00000265164 PHOX2BQ99453 314 aa21.09■□□□□ 0.97
CASP6-201ENST00000265164 RPP25Q9BUL9 199 aaKnown RBP21.09■□□□□ 0.97
CASP6-201ENST00000265164 MFSD1Q9H3U5 465 aa21.09■□□□□ 0.97
CASP6-201ENST00000265164 DEF6Q9H4E7 631 aa21.09■□□□□ 0.97
CASP6-201ENST00000265164 EPN1Q9Y6I3 576 aaPredicted RBP21.09■□□□□ 0.97
CASP6-201ENST00000265164 NPR3P17342 541 aa21.08■□□□□ 0.96
CASP6-201ENST00000265164 BPIFB4P59827 614 aa21.08■□□□□ 0.96
CASP6-201ENST00000265164 SLC5A9Q2M3M2 681 aa21.08■□□□□ 0.96
CASP6-201ENST00000265164 SV2CQ496J9 727 aa21.08■□□□□ 0.96
CASP6-201ENST00000265164 PABPC1LQ4VXU2 614 aaKnown RBP21.08■□□□□ 0.96
CASP6-201ENST00000265164 ZNF280DQ6N043 979 aa21.08■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms