RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 UBIAD1Q9Y5Z9 338 aa16.92■□□□□ 0.3
PDZRN3-201ENST00000263666 KBTBD13C9JR72 458 aa16.92■□□□□ 0.3
PDZRN3-201ENST00000263666 MAPTP10636 758 aaKnown RBP16.92■□□□□ 0.3
PDZRN3-201ENST00000263666 WDR4P57081 412 aaKnown RBP16.92■□□□□ 0.3
PDZRN3-201ENST00000263666 C15orf59Q2T9L4 293 aaPredicted RBP16.92■□□□□ 0.3
PDZRN3-201ENST00000263666 DENND1BQ6P3S1 775 aa16.92■□□□□ 0.3
PDZRN3-201ENST00000263666 RAPH1Q70E73 1250 aa16.92■□□□□ 0.3
PDZRN3-201ENST00000263666 PPIL6Q8IXY8 311 aa16.92■□□□□ 0.3
PDZRN3-201ENST00000263666 AGGF1Q8N302 714 aaeCLIP16.92■□□□□ 0.3
PDZRN3-201ENST00000263666 NAF1Q96HR8 494 aaKnown RBP16.92■□□□□ 0.3
PDZRN3-201ENST00000263666 SLC38A10Q9HBR0 1119 aa16.92■□□□□ 0.3
PDZRN3-201ENST00000263666 SNX9Q9Y5X1 595 aa16.92■□□□□ 0.3
PDZRN3-201ENST00000263666 VWA5AO00534 786 aa16.92■□□□□ 0.3
PDZRN3-201ENST00000263666 FAM155BO75949 473 aa16.92■□□□□ 0.3
PDZRN3-201ENST00000263666 CD48P09326 243 aa16.92■□□□□ 0.3
PDZRN3-201ENST00000263666 PIGHQ14442 188 aaPredicted RBP16.92■□□□□ 0.3
PDZRN3-201ENST00000263666 LY6KQ17RY6 165 aa16.92■□□□□ 0.3
PDZRN3-201ENST00000263666 ANKRD22Q5VYY1 191 aa16.92■□□□□ 0.3
PDZRN3-201ENST00000263666 POU5F2Q8N7G0 328 aa16.92■□□□□ 0.3
PDZRN3-201ENST00000263666 JOSD2Q8TAC2 188 aa16.92■□□□□ 0.3
PDZRN3-201ENST00000263666 ZNF516Q92618 1163 aa16.92■□□□□ 0.3
PDZRN3-201ENST00000263666 DDX27Q96GQ7 796 aaKnown RBP16.92■□□□□ 0.3
PDZRN3-201ENST00000263666 KLC2Q9H0B6 622 aa16.92■□□□□ 0.3
PDZRN3-201ENST00000263666 YY1AP1Q9H869 796 aa16.92■□□□□ 0.3
PDZRN3-201ENST00000263666 APOBEC3GQ9HC16 384 aaKnown RBP16.92■□□□□ 0.3
PDZRN3-201ENST00000263666 CCDC88AQ3V6T2 1871 aa16.92■□□□□ 0.3
PDZRN3-201ENST00000263666 LIASO43766 372 aa16.91■□□□□ 0.3
PDZRN3-201ENST00000263666 GARTP22102 1010 aa16.91■□□□□ 0.3
PDZRN3-201ENST00000263666 SDC4P31431 198 aa16.91■□□□□ 0.3
PDZRN3-201ENST00000263666 FKBP1AP62942 108 aaKnown RBP16.91■□□□□ 0.3
PDZRN3-201ENST00000263666 C1orf220Q5T0J3 134 aa16.91■□□□□ 0.3
PDZRN3-201ENST00000263666 PIGWQ7Z7B1 504 aa16.91■□□□□ 0.3
PDZRN3-201ENST00000263666 TMEM130Q8N3G9 435 aa16.91■□□□□ 0.3
PDZRN3-201ENST00000263666 SPATA33Q96N06 139 aa16.91■□□□□ 0.3
PDZRN3-201ENST00000263666 TMEM120AQ9BXJ8 343 aa16.91■□□□□ 0.3
PDZRN3-201ENST00000263666 A0A1B0GUL6 1792 aa16.91■□□□□ 0.3
PDZRN3-201ENST00000263666 UBR2Q8IWV8 1755 aa16.91■□□□□ 0.3
PDZRN3-201ENST00000263666 MEI4A8MW99 385 aa16.91■□□□□ 0.3
PDZRN3-201ENST00000263666 EPHX2P34913 555 aa16.91■□□□□ 0.3
PDZRN3-201ENST00000263666 ABCG1P45844 678 aa16.91■□□□□ 0.3
PDZRN3-201ENST00000263666 CRADDP78560 199 aa16.91■□□□□ 0.3
PDZRN3-201ENST00000263666 TAF5Q15542 800 aa16.91■□□□□ 0.3
PDZRN3-201ENST00000263666 KBTBD12Q3ZCT8 623 aa16.91■□□□□ 0.3
PDZRN3-201ENST00000263666 KDELC2Q7Z4H8 507 aa16.91■□□□□ 0.3
PDZRN3-201ENST00000263666 ADAM7Q9H2U9 754 aa16.91■□□□□ 0.3
PDZRN3-201ENST00000263666 EPB41L4BQ9H329 900 aa16.91■□□□□ 0.3
PDZRN3-201ENST00000263666 ASNSD1Q9NWL6 643 aa16.91■□□□□ 0.3
PDZRN3-201ENST00000263666 MCM8Q9UJA3 840 aa16.91■□□□□ 0.3
PDZRN3-201ENST00000263666 PACSIN3Q9UKS6 424 aa16.91■□□□□ 0.3
PDZRN3-201ENST00000263666 EME2A4GXA9 379 aaPredicted RBP16.91■□□□□ 0.3
PDZRN3-201ENST00000263666 SPECC1L-ADORA2AF8WAN1 911 aa16.91■□□□□ 0.3
PDZRN3-201ENST00000263666 NEMP1O14524 444 aa16.91■□□□□ 0.3
PDZRN3-201ENST00000263666 NVLO15381 856 aaKnown RBP16.91■□□□□ 0.3
PDZRN3-201ENST00000263666 FDX1P10109 184 aa16.91■□□□□ 0.3
PDZRN3-201ENST00000263666 GEN1Q17RS7 908 aa16.91■□□□□ 0.3
PDZRN3-201ENST00000263666 MAP1SQ66K74 1059 aaPredicted RBP16.91■□□□□ 0.3
PDZRN3-201ENST00000263666 ZC3H3Q8IXZ2 948 aaKnown RBP16.91■□□□□ 0.3
PDZRN3-201ENST00000263666 EFCAB3Q8N7B9 438 aa16.91■□□□□ 0.3
PDZRN3-201ENST00000263666 TTC13Q8NBP0 860 aa16.91■□□□□ 0.3
PDZRN3-201ENST00000263666 MIEF2Q96C03 454 aa16.91■□□□□ 0.3
PDZRN3-201ENST00000263666 SLITRK1Q96PX8 696 aa16.91■□□□□ 0.3
PDZRN3-201ENST00000263666 MED10Q9BTT4 135 aa16.91■□□□□ 0.3
PDZRN3-201ENST00000263666 GGA2Q9UJY4 613 aa16.91■□□□□ 0.3
PDZRN3-201ENST00000263666 ATP5HO75947 161 aa16.91■□□□□ 0.3
PDZRN3-201ENST00000263666 UNC5CO95185 931 aa16.91■□□□□ 0.3
PDZRN3-201ENST00000263666 GLRA2P23416 452 aa16.91■□□□□ 0.3
PDZRN3-201ENST00000263666 BACE1P56817 501 aa16.91■□□□□ 0.3
PDZRN3-201ENST00000263666 SGSM1Q2NKQ1 1148 aa16.91■□□□□ 0.3
PDZRN3-201ENST00000263666 ZACNQ401N2 412 aa16.91■□□□□ 0.3
PDZRN3-201ENST00000263666 ANKRD13AQ8IZ07 590 aa16.91■□□□□ 0.3
PDZRN3-201ENST00000263666 ZCCHC9Q8N567 271 aaKnown RBP16.91■□□□□ 0.3
PDZRN3-201ENST00000263666 MRIQ9BWK5 157 aa16.91■□□□□ 0.3
PDZRN3-201ENST00000263666 A1CFQ9NQ94 594 aaKnown RBP16.91■□□□□ 0.3
PDZRN3-201ENST00000263666 DDX56Q9NY93 547 aaKnown RBP16.91■□□□□ 0.3
PDZRN3-201ENST00000263666 STRIP2Q9ULQ0 834 aa16.91■□□□□ 0.3
PDZRN3-201ENST00000263666 ADM5C9JUS6 153 aa16.9■□□□□ 0.3
PDZRN3-201ENST00000263666 EGFRP00533 1210 aa16.9■□□□□ 0.3
PDZRN3-201ENST00000263666 SUPT20HL2P0C7V6 817 aa16.9■□□□□ 0.3
PDZRN3-201ENST00000263666 AP1B1Q10567 949 aa16.9■□□□□ 0.3
PDZRN3-201ENST00000263666 CES3Q6UWW8 571 aa16.9■□□□□ 0.3
PDZRN3-201ENST00000263666 UNC45BQ8IWX7 931 aa16.9■□□□□ 0.3
PDZRN3-201ENST00000263666 CLMNQ96JQ2 1002 aa16.9■□□□□ 0.3
PDZRN3-201ENST00000263666 CPSF2Q9P2I0 782 aaKnown RBP16.9■□□□□ 0.3
PDZRN3-201ENST00000263666 C5orf60A6NFR6 353 aa16.9■□□□□ 0.3
PDZRN3-201ENST00000263666 MYCP01106 439 aaPredicted RBP16.9■□□□□ 0.3
PDZRN3-201ENST00000263666 OTOAQ7RTW8 1153 aa16.9■□□□□ 0.3
PDZRN3-201ENST00000263666 TRABD2AQ86V40 505 aa16.9■□□□□ 0.3
PDZRN3-201ENST00000263666 ZNF677Q86XU0 584 aa16.9■□□□□ 0.3
PDZRN3-201ENST00000263666 RFWD2Q8NHY2 731 aa16.9■□□□□ 0.3
PDZRN3-201ENST00000263666 CPB2Q96IY4 423 aa16.9■□□□□ 0.3
PDZRN3-201ENST00000263666 FAM237BA0A1B0GVD1 139 aa16.9■□□□□ 0.3
PDZRN3-201ENST00000263666 TRPA1O75762 1119 aa16.9■□□□□ 0.3
PDZRN3-201ENST00000263666 PAEPP09466 180 aa16.9■□□□□ 0.3
PDZRN3-201ENST00000263666 TFDP2Q14188 446 aa16.9■□□□□ 0.3
PDZRN3-201ENST00000263666 DLK2Q6UY11 383 aa16.9■□□□□ 0.3
PDZRN3-201ENST00000263666 PRPF39Q86UA1 669 aaKnown RBP16.9■□□□□ 0.3
PDZRN3-201ENST00000263666 TIPINQ9BVW5 301 aa16.9■□□□□ 0.3
PDZRN3-201ENST00000263666 TRIM4Q9C037 500 aa16.9■□□□□ 0.3
PDZRN3-201ENST00000263666 VPS33BQ9H267 617 aa16.9■□□□□ 0.3
PDZRN3-201ENST00000263666 AAASQ9NRG9 546 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms