RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 CTAGE8P0CG41 777 aa24.15■■□□□ 1.46
SMARCB1-201ENST00000263121 CSF2RAP15509 400 aa24.15■■□□□ 1.46
SMARCB1-201ENST00000263121 RAG1P15918 1043 aa24.15■■□□□ 1.46
SMARCB1-201ENST00000263121 CTNNA1P35221 906 aaKnown RBP24.15■■□□□ 1.46
SMARCB1-201ENST00000263121 RGS7P49802 495 aa24.15■■□□□ 1.46
SMARCB1-201ENST00000263121 OVOS1Q6IE37 1185 aa24.15■■□□□ 1.46
SMARCB1-201ENST00000263121 DCUN1D2Q6PH85 259 aa24.15■■□□□ 1.46
SMARCB1-201ENST00000263121 CTAGE6Q86UF2 777 aa24.15■■□□□ 1.46
SMARCB1-201ENST00000263121 CTAGE4Q8IX94 777 aa24.15■■□□□ 1.46
SMARCB1-201ENST00000263121 MYCBPAPQ8TBZ2 947 aa24.15■■□□□ 1.46
SMARCB1-201ENST00000263121 TMEM175Q9BSA9 504 aa24.15■■□□□ 1.46
SMARCB1-201ENST00000263121 DUSP16Q9BY84 665 aa24.15■■□□□ 1.46
SMARCB1-201ENST00000263121 B3GNT5Q9BYG0 378 aa24.15■■□□□ 1.46
SMARCB1-201ENST00000263121 COL4A6Q14031 1691 aa24.14■■□□□ 1.45
SMARCB1-201ENST00000263121 KRT3P12035 628 aa24.14■■□□□ 1.45
SMARCB1-201ENST00000263121 PLA2G4AP47712 749 aa24.14■■□□□ 1.45
SMARCB1-201ENST00000263121 ZNF252P-AS1Q0IIN9 211 aa24.14■■□□□ 1.45
SMARCB1-201ENST00000263121 INTS6LQ5JSJ4 861 aaKnown RBP24.14■■□□□ 1.45
SMARCB1-201ENST00000263121 DCAF12L1Q5VU92 463 aa24.14■■□□□ 1.45
SMARCB1-201ENST00000263121 FAM183BPQ6ZVS7 135 aa24.14■■□□□ 1.45
SMARCB1-201ENST00000263121 RSRC2Q7L4I2 434 aaKnown RBP24.14■■□□□ 1.45
SMARCB1-201ENST00000263121 LRRC43Q8N309 656 aa24.14■■□□□ 1.45
SMARCB1-201ENST00000263121 UBL4BQ8N7F7 174 aa24.14■■□□□ 1.45
SMARCB1-201ENST00000263121 ALG3Q92685 438 aa24.14■■□□□ 1.45
SMARCB1-201ENST00000263121 KRT35Q92764 455 aa24.14■■□□□ 1.45
SMARCB1-201ENST00000263121 MS4A14Q96JA4 679 aa24.14■■□□□ 1.45
SMARCB1-201ENST00000263121 PKMYT1Q99640 499 aa24.14■■□□□ 1.45
SMARCB1-201ENST00000263121 HCSTQ9UBK5 93 aa24.14■■□□□ 1.45
SMARCB1-201ENST00000263121 CCDC66A2RUB6 948 aa24.13■■□□□ 1.45
SMARCB1-201ENST00000263121 CLDN5O00501 218 aa24.13■■□□□ 1.45
SMARCB1-201ENST00000263121 XPO1O14980 1071 aaKnown RBP24.13■■□□□ 1.45
SMARCB1-201ENST00000263121 TRAPPC3O43617 180 aa24.13■■□□□ 1.45
SMARCB1-201ENST00000263121 MARCKSL1P49006 195 aa24.13■■□□□ 1.45
SMARCB1-201ENST00000263121 SLC11A1P49279 550 aa24.13■■□□□ 1.45
SMARCB1-201ENST00000263121 PEX5P50542 639 aa24.13■■□□□ 1.45
SMARCB1-201ENST00000263121 SNX16P57768 344 aa24.13■■□□□ 1.45
SMARCB1-201ENST00000263121 OGDHQ02218 1023 aa24.13■■□□□ 1.45
SMARCB1-201ENST00000263121 CFAP221Q4G0U5 840 aa24.13■■□□□ 1.45
SMARCB1-201ENST00000263121 FAM171BQ6P995 826 aa24.13■■□□□ 1.45
SMARCB1-201ENST00000263121 RASGEF1CQ8N431 466 aa24.13■■□□□ 1.45
SMARCB1-201ENST00000263121 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.13■■□□□ 1.45
SMARCB1-201ENST00000263121 PCED1BQ96HM7 432 aa24.13■■□□□ 1.45
SMARCB1-201ENST00000263121 RPGRIP1Q96KN7 1286 aa24.13■■□□□ 1.45
SMARCB1-201ENST00000263121 CARD9Q9H257 536 aa24.13■■□□□ 1.45
SMARCB1-201ENST00000263121 METTL5Q9NRN9 209 aaKnown RBP24.13■■□□□ 1.45
SMARCB1-201ENST00000263121 MARCH5Q9NX47 278 aa24.13■■□□□ 1.45
SMARCB1-201ENST00000263121 EHD2Q9NZN4 543 aa24.13■■□□□ 1.45
SMARCB1-201ENST00000263121 ADAM28Q9UKQ2 775 aa24.13■■□□□ 1.45
SMARCB1-201ENST00000263121 PCDHA3Q9Y5H8 950 aa24.13■■□□□ 1.45
SMARCB1-201ENST00000263121 TADA2AO75478 443 aa24.12■■□□□ 1.45
SMARCB1-201ENST00000263121 DGKIO75912 1065 aa24.12■■□□□ 1.45
SMARCB1-201ENST00000263121 ALDH2P05091 517 aa24.12■■□□□ 1.45
SMARCB1-201ENST00000263121 NPR3P17342 541 aa24.12■■□□□ 1.45
SMARCB1-201ENST00000263121 EN2P19622 333 aaPredicted RBP24.12■■□□□ 1.45
SMARCB1-201ENST00000263121 RFC1P35251 1148 aaPredicted RBP24.12■■□□□ 1.45
SMARCB1-201ENST00000263121 CCDC181Q5TID7 509 aa24.12■■□□□ 1.45
SMARCB1-201ENST00000263121 THEM5Q8N1Q8 247 aa24.12■■□□□ 1.45
SMARCB1-201ENST00000263121 TMEM199Q8N511 208 aa24.12■■□□□ 1.45
SMARCB1-201ENST00000263121 NIPA2Q8N8Q9 360 aa24.12■■□□□ 1.45
SMARCB1-201ENST00000263121 OR10T2Q8NGX3 314 aa24.12■■□□□ 1.45
SMARCB1-201ENST00000263121 JOSD2Q8TAC2 188 aa24.12■■□□□ 1.45
SMARCB1-201ENST00000263121 FNIP1Q8TF40 1166 aa24.12■■□□□ 1.45
SMARCB1-201ENST00000263121 HSFY1Q96LI6 401 aa24.12■■□□□ 1.45
SMARCB1-201ENST00000263121 COLEC11Q9BWP8 271 aa24.12■■□□□ 1.45
SMARCB1-201ENST00000263121 SMARCAL1Q9NZC9 954 aa24.12■■□□□ 1.45
SMARCB1-201ENST00000263121 PIK3R2O00459 728 aa24.11■■□□□ 1.45
SMARCB1-201ENST00000263121 PAFAH1B1P43034 410 aa24.11■■□□□ 1.45
SMARCB1-201ENST00000263121 YWHAHQ04917 246 aaPredicted RBP24.11■■□□□ 1.45
SMARCB1-201ENST00000263121 ITIH3Q06033 890 aa24.11■■□□□ 1.45
SMARCB1-201ENST00000263121 NAA30Q147X3 362 aaPredicted RBP24.11■■□□□ 1.45
SMARCB1-201ENST00000263121 FAM102AQ5T9C2 384 aaPredicted RBP24.11■■□□□ 1.45
SMARCB1-201ENST00000263121 OR6B2Q6IFH4 312 aa24.11■■□□□ 1.45
SMARCB1-201ENST00000263121 OLFML1Q6UWY5 402 aa24.11■■□□□ 1.45
SMARCB1-201ENST00000263121 CLEC20AQ6ZU45 233 aa24.11■■□□□ 1.45
SMARCB1-201ENST00000263121 FAM35AQ86V20 835 aa24.11■■□□□ 1.45
SMARCB1-201ENST00000263121 ACTRT1Q8TDG2 376 aa24.11■■□□□ 1.45
SMARCB1-201ENST00000263121 GOLGA1Q92805 767 aa24.11■■□□□ 1.45
SMARCB1-201ENST00000263121 MED10Q9BTT4 135 aa24.11■■□□□ 1.45
SMARCB1-201ENST00000263121 NOL12Q9UGY1 213 aaKnown RBP eCLIP24.11■■□□□ 1.45
SMARCB1-201ENST00000263121 FAN1Q9Y2M0 1017 aa24.11■■□□□ 1.45
SMARCB1-201ENST00000263121 V9GYY5 206 aaPredicted RBP24.11■■□□□ 1.45
SMARCB1-201ENST00000263121 SYN3O14994 580 aa24.11■■□□□ 1.45
SMARCB1-201ENST00000263121 PAPSS1O43252 624 aaPredicted RBP24.11■■□□□ 1.45
SMARCB1-201ENST00000263121 UPP2O95045 317 aa24.11■■□□□ 1.45
SMARCB1-201ENST00000263121 OAZ2O95190 189 aa24.11■■□□□ 1.45
SMARCB1-201ENST00000263121 GALTP07902 379 aa24.11■■□□□ 1.45
SMARCB1-201ENST00000263121 FAM200BP0CF97 657 aa24.11■■□□□ 1.45
SMARCB1-201ENST00000263121 ACADSBP45954 432 aa24.11■■□□□ 1.45
SMARCB1-201ENST00000263121 PIGHQ14442 188 aaPredicted RBP24.11■■□□□ 1.45
SMARCB1-201ENST00000263121 ZDHHC17Q8IUH5 632 aa24.11■■□□□ 1.45
SMARCB1-201ENST00000263121 TOP1MTQ969P6 601 aa24.11■■□□□ 1.45
SMARCB1-201ENST00000263121 KRT82Q9NSB4 513 aa24.11■■□□□ 1.45
SMARCB1-201ENST00000263121 CEP104O60308 925 aa24.1■■□□□ 1.45
SMARCB1-201ENST00000263121 EFCAB14O75071 495 aa24.1■■□□□ 1.45
SMARCB1-201ENST00000263121 SLC8A3P57103 927 aa24.1■■□□□ 1.45
SMARCB1-201ENST00000263121 PIGZQ86VD9 579 aa24.1■■□□□ 1.45
SMARCB1-201ENST00000263121 TSC1Q92574 1164 aa24.1■■□□□ 1.45
SMARCB1-201ENST00000263121 MYLPFQ96A32 169 aa24.1■■□□□ 1.45
SMARCB1-201ENST00000263121 PIWIL1Q96J94 861 aaKnown RBP24.1■■□□□ 1.45
SMARCB1-201ENST00000263121 TMEM59LQ9UK28 342 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms