RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 SARSP49591 514 aaKnown RBP12.52□□□□□ -0.41
SMG6-201ENST00000263073 TRPM1Q7Z4N2 1603 aa12.52□□□□□ -0.41
SMG6-201ENST00000263073 MTMR8Q96EF0 704 aa12.52□□□□□ -0.41
SMG6-201ENST00000263073 DCUN1D1Q96GG9 259 aa12.52□□□□□ -0.41
SMG6-201ENST00000263073 MYLK2Q9H1R3 596 aa12.52□□□□□ -0.41
SMG6-201ENST00000263073 UBP1Q9NZI7 540 aa12.52□□□□□ -0.41
SMG6-201ENST00000263073 PLAGL2Q9UPG8 496 aa12.52□□□□□ -0.41
SMG6-201ENST00000263073 TBC1D12O60347 775 aa12.51□□□□□ -0.41
SMG6-201ENST00000263073 MAP3K7CLP57077 242 aa12.51□□□□□ -0.41
SMG6-201ENST00000263073 GLRA4Q5JXX5 417 aa12.51□□□□□ -0.41
SMG6-201ENST00000263073 AADACL2Q6P093 401 aa12.51□□□□□ -0.41
SMG6-201ENST00000263073 SLC30A10Q6XR72 485 aa12.51□□□□□ -0.41
SMG6-201ENST00000263073 RIBC1Q8N443 379 aaPredicted RBP12.51□□□□□ -0.41
SMG6-201ENST00000263073 C10orf88Q9H8K7 445 aa12.51□□□□□ -0.41
SMG6-201ENST00000263073 GEMIN8Q9NWZ8 242 aaKnown RBP12.51□□□□□ -0.41
SMG6-201ENST00000263073 FBXO40Q9UH90 709 aa12.51□□□□□ -0.41
SMG6-201ENST00000263073 NAALADL1Q9UQQ1 740 aa12.51□□□□□ -0.41
SMG6-201ENST00000263073 PEX1O43933 1283 aa12.51□□□□□ -0.41
SMG6-201ENST00000263073 TXNP10599 105 aaKnown RBP12.51□□□□□ -0.41
SMG6-201ENST00000263073 TPP2P29144 1249 aaPredicted RBP12.51□□□□□ -0.41
SMG6-201ENST00000263073 CENPAP49450 140 aa12.51□□□□□ -0.41
SMG6-201ENST00000263073 C16orf72Q14CZ0 275 aa12.51□□□□□ -0.41
SMG6-201ENST00000263073 EDRF1Q3B7T1 1238 aa12.51□□□□□ -0.41
SMG6-201ENST00000263073 TTC23LQ6PF05 361 aa12.51□□□□□ -0.41
SMG6-201ENST00000263073 BNC2Q6ZN30 1099 aaPredicted RBP12.51□□□□□ -0.41
SMG6-201ENST00000263073 CBWD2Q8IUF1 395 aa12.51□□□□□ -0.41
SMG6-201ENST00000263073 STX19Q8N4C7 294 aa12.51□□□□□ -0.41
SMG6-201ENST00000263073 GDPD5Q8WTR4 605 aa12.51□□□□□ -0.41
SMG6-201ENST00000263073 TARS2Q9BW92 718 aaKnown RBP12.51□□□□□ -0.41
SMG6-201ENST00000263073 ILKAPQ9H0C8 392 aaPredicted RBP12.51□□□□□ -0.41
SMG6-201ENST00000263073 MUC3BQ9H195 1237 aa12.51□□□□□ -0.41
SMG6-201ENST00000263073 RSAD1Q9HA92 442 aa12.51□□□□□ -0.41
SMG6-201ENST00000263073 AGPAT3Q9NRZ7 376 aa12.51□□□□□ -0.41
SMG6-201ENST00000263073 DAGLAQ9Y4D2 1042 aa12.51□□□□□ -0.41
SMG6-201ENST00000263073 C1orf232A0A0U1RR37 186 aa12.51□□□□□ -0.41
SMG6-201ENST00000263073 F8VZ95 297 aa12.51□□□□□ -0.41
SMG6-201ENST00000263073 NPTXRO95502 500 aa12.51□□□□□ -0.41
SMG6-201ENST00000263073 ITGB3P05106 788 aa12.51□□□□□ -0.41
SMG6-201ENST00000263073 HIST1H2AGP0C0S8 130 aaPredicted RBP12.51□□□□□ -0.41
SMG6-201ENST00000263073 CDH2P19022 906 aaPredicted RBP12.51□□□□□ -0.41
SMG6-201ENST00000263073 HIST1H2ADP20671 130 aa12.51□□□□□ -0.41
SMG6-201ENST00000263073 RASA1P20936 1047 aa12.51□□□□□ -0.41
SMG6-201ENST00000263073 EIF2B2P49770 351 aaKnown RBP12.51□□□□□ -0.41
SMG6-201ENST00000263073 ZCCHC23Q6ZST2 131 aa12.51□□□□□ -0.41
SMG6-201ENST00000263073 TFB1MQ8WVM0 346 aaKnown RBP12.51□□□□□ -0.41
SMG6-201ENST00000263073 PHF21AQ96BD5 680 aa12.51□□□□□ -0.41
SMG6-201ENST00000263073 TSPAN17Q96FV3 270 aa12.51□□□□□ -0.41
SMG6-201ENST00000263073 HIST1H2AHQ96KK5 128 aa12.51□□□□□ -0.41
SMG6-201ENST00000263073 HIST1H2AJQ99878 128 aa12.51□□□□□ -0.41
SMG6-201ENST00000263073 H2AFJQ9BTM1 129 aa12.51□□□□□ -0.41
SMG6-201ENST00000263073 ZBED2Q9BTP6 218 aa12.51□□□□□ -0.41
SMG6-201ENST00000263073 RXFP1Q9HBX9 757 aa12.51□□□□□ -0.41
SMG6-201ENST00000263073 NCAM1P13591 858 aa12.51□□□□□ -0.41
SMG6-201ENST00000263073 POU1F1P28069 291 aa12.51□□□□□ -0.41
SMG6-201ENST00000263073 DDX39BQ13838 428 aaKnown RBP12.51□□□□□ -0.41
SMG6-201ENST00000263073 NEDD8Q15843 81 aa12.51□□□□□ -0.41
SMG6-201ENST00000263073 SNX30Q5VWJ9 437 aa12.51□□□□□ -0.41
SMG6-201ENST00000263073 SEPHS2Q99611 448 aa12.51□□□□□ -0.41
SMG6-201ENST00000263073 DONSONQ9NYP3 566 aa12.51□□□□□ -0.41
SMG6-201ENST00000263073 TAGLN3Q9UI15 199 aa12.51□□□□□ -0.41
SMG6-201ENST00000263073 DAPK2Q9UIK4 370 aa12.51□□□□□ -0.41
SMG6-201ENST00000263073 DALRD3Q5D0E6 543 aaKnown RBP12.5□□□□□ -0.41
SMG6-201ENST00000263073 PTRHD1Q6GMV3 140 aaKnown RBP12.5□□□□□ -0.41
SMG6-201ENST00000263073 CLEC4GQ6UXB4 293 aa12.5□□□□□ -0.41
SMG6-201ENST00000263073 DDX53Q86TM3 631 aaKnown RBP12.5□□□□□ -0.41
SMG6-201ENST00000263073 TNIP3Q96KP6 325 aa12.5□□□□□ -0.41
SMG6-201ENST00000263073 YIPF2Q9BWQ6 316 aa12.5□□□□□ -0.41
SMG6-201ENST00000263073 DCLRE1BQ9H816 532 aa12.5□□□□□ -0.41
SMG6-201ENST00000263073 ACAP1Q15027 740 aa12.5□□□□□ -0.41
SMG6-201ENST00000263073 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.5□□□□□ -0.41
SMG6-201ENST00000263073 LPCAT2Q7L5N7 544 aa12.5□□□□□ -0.41
SMG6-201ENST00000263073 EMC1Q8N766 993 aa12.5□□□□□ -0.41
SMG6-201ENST00000263073 TTLL6Q8N841 843 aa12.5□□□□□ -0.41
SMG6-201ENST00000263073 PLEKHA8Q96JA3 519 aa12.5□□□□□ -0.41
SMG6-201ENST00000263073 NSMCE4AQ9NXX6 385 aa12.5□□□□□ -0.41
SMG6-201ENST00000263073 KLK14Q9P0G3 267 aa12.5□□□□□ -0.41
SMG6-201ENST00000263073 PRR12Q9ULL5 1215 aa12.5□□□□□ -0.41
SMG6-201ENST00000263073 H0YC42 278 aa12.5□□□□□ -0.41
SMG6-201ENST00000263073 RPS6KA4O75676 772 aa12.5□□□□□ -0.41
SMG6-201ENST00000263073 PGK2P07205 417 aa12.5□□□□□ -0.41
SMG6-201ENST00000263073 FAM86B2P0C5J1 330 aa12.5□□□□□ -0.41
SMG6-201ENST00000263073 CALB2P22676 271 aa12.5□□□□□ -0.41
SMG6-201ENST00000263073 KLRK1P26718 216 aa12.5□□□□□ -0.41
SMG6-201ENST00000263073 ALDH5A1P51649 535 aaPredicted RBP12.5□□□□□ -0.41
SMG6-201ENST00000263073 POU4F1Q01851 419 aa12.5□□□□□ -0.41
SMG6-201ENST00000263073 TMC5Q6UXY8 1006 aa12.5□□□□□ -0.41
SMG6-201ENST00000263073 TDRD5Q8NAT2 981 aaKnown RBP12.5□□□□□ -0.41
SMG6-201ENST00000263073 ZNF197O14709 1029 aa12.5□□□□□ -0.41
SMG6-201ENST00000263073 FOXP2O15409 715 aa12.5□□□□□ -0.41
SMG6-201ENST00000263073 SOX10P56693 466 aa12.5□□□□□ -0.41
SMG6-201ENST00000263073 ALDH6A1Q02252 535 aaKnown RBP12.5□□□□□ -0.41
SMG6-201ENST00000263073 PGS1Q32NB8 556 aa12.5□□□□□ -0.41
SMG6-201ENST00000263073 RABL6Q3YEC7 729 aaPredicted RBP12.5□□□□□ -0.41
SMG6-201ENST00000263073 PCNX4Q63HM2 1172 aa12.5□□□□□ -0.41
SMG6-201ENST00000263073 ZBTB46Q86UZ6 589 aa12.5□□□□□ -0.41
SMG6-201ENST00000263073 L3MBTL3Q96JM7 780 aaPredicted RBP12.5□□□□□ -0.41
SMG6-201ENST00000263073 PAIP1Q9H074 479 aaKnown RBP12.5□□□□□ -0.41
SMG6-201ENST00000263073 PTPN4P29074 926 aa12.5□□□□□ -0.41
SMG6-201ENST00000263073 RBP5P82980 135 aa12.5□□□□□ -0.41
SMG6-201ENST00000263073 TTMPQ5BVD1 217 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms