RNA–Protein interactions for RNA: ENST00000262768.11

TIMP2-201, Transcript of TIMP metallopeptidase inhibitor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP2, Length 3,652 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP2-201ENST00000262768 COL2A1P02458 1487 aaPredicted RBP15.85■□□□□ 0.13
TIMP2-201ENST00000262768 TMEM120BA0PK00 339 aa15.85■□□□□ 0.13
TIMP2-201ENST00000262768 ERBB2P04626 1255 aa15.85■□□□□ 0.13
TIMP2-201ENST00000262768 SRGAP2BP0DMP2 458 aa15.85■□□□□ 0.13
TIMP2-201ENST00000262768 EIF4BP23588 611 aaKnown RBP15.85■□□□□ 0.13
TIMP2-201ENST00000262768 MFSD10Q14728 455 aa15.85■□□□□ 0.13
TIMP2-201ENST00000262768 ZC3H12AQ5D1E8 599 aaKnown RBP15.85■□□□□ 0.13
TIMP2-201ENST00000262768 RASGEF1CQ8N431 466 aa15.85■□□□□ 0.13
TIMP2-201ENST00000262768 ZNF473Q8WTR7 871 aaKnown RBP15.85■□□□□ 0.13
TIMP2-201ENST00000262768 CXCL16Q9H2A7 254 aa15.85■□□□□ 0.13
TIMP2-201ENST00000262768 VTA1Q9NP79 307 aa15.85■□□□□ 0.13
TIMP2-201ENST00000262768 TCP11X1B4DZS4 312 aa15.85■□□□□ 0.13
TIMP2-201ENST00000262768 PECAM1P16284 738 aaPredicted RBP15.85■□□□□ 0.13
TIMP2-201ENST00000262768 ERFP50548 548 aa15.85■□□□□ 0.13
TIMP2-201ENST00000262768 SESN2P58004 480 aaPredicted RBP15.85■□□□□ 0.13
TIMP2-201ENST00000262768 OGDHQ02218 1023 aa15.85■□□□□ 0.13
TIMP2-201ENST00000262768 MCL1Q07820 350 aa15.85■□□□□ 0.13
TIMP2-201ENST00000262768 HIF1AQ16665 826 aa15.85■□□□□ 0.13
TIMP2-201ENST00000262768 RAB6CQ53S08 254 aa15.85■□□□□ 0.13
TIMP2-201ENST00000262768 L3MBTL3Q96JM7 780 aaPredicted RBP15.85■□□□□ 0.13
TIMP2-201ENST00000262768 SLC13A1Q9BZW2 595 aa15.85■□□□□ 0.13
TIMP2-201ENST00000262768 RAB6CQ9H0N0 254 aa15.85■□□□□ 0.13
TIMP2-201ENST00000262768 DPEP3Q9H4B8 488 aa15.85■□□□□ 0.13
TIMP2-201ENST00000262768 PDLIM7Q9NR12 457 aa15.85■□□□□ 0.13
TIMP2-201ENST00000262768 ITIH2P19823 946 aa15.84■□□□□ 0.13
TIMP2-201ENST00000262768 ACO1P21399 889 aaKnown RBP15.84■□□□□ 0.13
TIMP2-201ENST00000262768 GPD1P21695 349 aa15.84■□□□□ 0.13
TIMP2-201ENST00000262768 ARL4AP40617 200 aa15.84■□□□□ 0.13
TIMP2-201ENST00000262768 TARBP2Q15633 366 aaKnown RBP15.84■□□□□ 0.13
TIMP2-201ENST00000262768 EDEM1Q92611 657 aa15.84■□□□□ 0.13
TIMP2-201ENST00000262768 SMC6Q96SB8 1091 aa15.84■□□□□ 0.13
TIMP2-201ENST00000262768 SNAI1O95863 264 aaPredicted RBP15.84■□□□□ 0.13
TIMP2-201ENST00000262768 MMP3P08254 477 aa15.84■□□□□ 0.13
TIMP2-201ENST00000262768 C3orf62Q6ZUJ4 267 aa15.84■□□□□ 0.13
TIMP2-201ENST00000262768 ZNF831Q5JPB2 1677 aa15.84■□□□□ 0.13
TIMP2-201ENST00000262768 RIPK2O43353 540 aa15.84■□□□□ 0.13
TIMP2-201ENST00000262768 XPOTO43592 962 aaKnown RBP15.84■□□□□ 0.13
TIMP2-201ENST00000262768 INHBAP08476 426 aa15.84■□□□□ 0.13
TIMP2-201ENST00000262768 ATP5DP30049 168 aa15.84■□□□□ 0.13
TIMP2-201ENST00000262768 MSH2P43246 934 aa15.84■□□□□ 0.13
TIMP2-201ENST00000262768 FNTAP49354 379 aa15.84■□□□□ 0.13
TIMP2-201ENST00000262768 MAP3K7CLP57077 242 aa15.84■□□□□ 0.13
TIMP2-201ENST00000262768 ROR1Q01973 937 aa15.84■□□□□ 0.13
TIMP2-201ENST00000262768 FASTKD3Q14CZ7 662 aaKnown RBP15.84■□□□□ 0.13
TIMP2-201ENST00000262768 CTU1Q7Z7A3 348 aaKnown RBP15.84■□□□□ 0.13
TIMP2-201ENST00000262768 DNAAF3Q8N9W5 541 aa15.84■□□□□ 0.13
TIMP2-201ENST00000262768 SDCBP2Q9H190 292 aa15.84■□□□□ 0.13
TIMP2-201ENST00000262768 IFT122Q9HBG6 1241 aa15.84■□□□□ 0.13
TIMP2-201ENST00000262768 XPO7Q9UIA9 1087 aaKnown RBP15.84■□□□□ 0.13
TIMP2-201ENST00000262768 FNDC3AQ9Y2H6 1198 aaKnown RBP15.84■□□□□ 0.13
TIMP2-201ENST00000262768 VGLL3A8MV65 326 aa15.83■□□□□ 0.13
TIMP2-201ENST00000262768 ATG7O95352 703 aa15.83■□□□□ 0.13
TIMP2-201ENST00000262768 FBXO47Q5MNV8 452 aa15.83■□□□□ 0.13
TIMP2-201ENST00000262768 ARHGEF18Q6ZSZ5 1173 aa15.83■□□□□ 0.13
TIMP2-201ENST00000262768 TSHZ1Q6ZSZ6 1077 aa15.83■□□□□ 0.13
TIMP2-201ENST00000262768 CLEC4CQ8WTT0 213 aa15.83■□□□□ 0.13
TIMP2-201ENST00000262768 ZC3H15Q8WU90 426 aaKnown RBP15.83■□□□□ 0.13
TIMP2-201ENST00000262768 TTC17Q96AE7 1141 aa15.83■□□□□ 0.13
TIMP2-201ENST00000262768 PIWIL1Q96J94 861 aaKnown RBP15.83■□□□□ 0.13
TIMP2-201ENST00000262768 FGFR1OP2Q9NVK5 253 aa15.83■□□□□ 0.13
TIMP2-201ENST00000262768 BARX2Q9UMQ3 279 aaPredicted RBP15.83■□□□□ 0.13
TIMP2-201ENST00000262768 C17orf102A2RUQ5 167 aa15.83■□□□□ 0.12
TIMP2-201ENST00000262768 RAD23BP54727 409 aa15.83■□□□□ 0.12
TIMP2-201ENST00000262768 TTC31Q49AM3 519 aaPredicted RBP15.83■□□□□ 0.12
TIMP2-201ENST00000262768 ZNF618Q5T7W0 954 aa15.83■□□□□ 0.12
TIMP2-201ENST00000262768 RSPH3Q86UC2 560 aa15.83■□□□□ 0.12
TIMP2-201ENST00000262768 VSIG1Q86XK7 387 aa15.83■□□□□ 0.12
TIMP2-201ENST00000262768 EXD1Q8NHP7 514 aa15.83■□□□□ 0.12
TIMP2-201ENST00000262768 CCDC110Q8TBZ0 833 aa15.83■□□□□ 0.12
TIMP2-201ENST00000262768 DCTN4Q9UJW0 460 aa15.83■□□□□ 0.12
TIMP2-201ENST00000262768 TSPAN1O60635 241 aa15.83■□□□□ 0.12
TIMP2-201ENST00000262768 MCF2P10911 925 aa15.83■□□□□ 0.12
TIMP2-201ENST00000262768 ELNP15502 786 aa15.83■□□□□ 0.12
TIMP2-201ENST00000262768 LMO2P25791 158 aa15.83■□□□□ 0.12
TIMP2-201ENST00000262768 MLH1P40692 756 aa15.83■□□□□ 0.12
TIMP2-201ENST00000262768 PTGISQ16647 500 aa15.83■□□□□ 0.12
TIMP2-201ENST00000262768 CCDC62Q6P9F0 684 aa15.83■□□□□ 0.12
TIMP2-201ENST00000262768 SLC27A1Q6PCB7 646 aa15.83■□□□□ 0.12
TIMP2-201ENST00000262768 FAM183BPQ6ZVS7 135 aa15.83■□□□□ 0.12
TIMP2-201ENST00000262768 ILDR2Q71H61 639 aa15.83■□□□□ 0.12
TIMP2-201ENST00000262768 USP33Q8TEY7 942 aa15.83■□□□□ 0.12
TIMP2-201ENST00000262768 DDX27Q96GQ7 796 aaKnown RBP15.83■□□□□ 0.12
TIMP2-201ENST00000262768 FERMT1Q9BQL6 677 aa15.83■□□□□ 0.12
TIMP2-201ENST00000262768 NRXN2Q9P2S2 1712 aa15.83■□□□□ 0.12
TIMP2-201ENST00000262768 DUSP28Q4G0W2 176 aa15.82■□□□□ 0.12
TIMP2-201ENST00000262768 BBOF1Q8ND07 529 aa15.82■□□□□ 0.12
TIMP2-201ENST00000262768 PPTC7Q8NI37 304 aa15.82■□□□□ 0.12
TIMP2-201ENST00000262768 KIF9Q9HAQ2 790 aa15.82■□□□□ 0.12
TIMP2-201ENST00000262768 SIX4Q9UIU6 781 aa15.82■□□□□ 0.12
TIMP2-201ENST00000262768 TPX2Q9ULW0 747 aaKnown RBP15.82■□□□□ 0.12
TIMP2-201ENST00000262768 TMEM191CA6NGB0 347 aa15.82■□□□□ 0.12
TIMP2-201ENST00000262768 CYB561D2O14569 222 aa15.82■□□□□ 0.12
TIMP2-201ENST00000262768 PSTPIP1O43586 416 aa15.82■□□□□ 0.12
TIMP2-201ENST00000262768 AVILO75366 819 aa15.82■□□□□ 0.12
TIMP2-201ENST00000262768 VDRP11473 427 aa15.82■□□□□ 0.12
TIMP2-201ENST00000262768 ITKQ08881 620 aa15.82■□□□□ 0.12
TIMP2-201ENST00000262768 FSCN1Q16658 493 aaKnown RBP15.82■□□□□ 0.12
TIMP2-201ENST00000262768 FBXW10Q5XX13 1052 aa15.82■□□□□ 0.12
TIMP2-201ENST00000262768 SRLQ86TD4 932 aa15.82■□□□□ 0.12
TIMP2-201ENST00000262768 HACE1Q8IYU2 909 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms