RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 PTK7Q13308 1070 aa18.83■□□□□ 0.6
TRAF4-201ENST00000262395 TMEM130Q8N3G9 435 aa18.83■□□□□ 0.6
TRAF4-201ENST00000262395 PDCD7Q8N8D1 485 aaKnown RBP18.83■□□□□ 0.6
TRAF4-201ENST00000262395 JOSD2Q8TAC2 188 aa18.83■□□□□ 0.6
TRAF4-201ENST00000262395 CLPTM1LQ96KA5 538 aa18.83■□□□□ 0.6
TRAF4-201ENST00000262395 DDX50Q9BQ39 737 aaKnown RBP18.83■□□□□ 0.6
TRAF4-201ENST00000262395 ACSS3Q9H6R3 686 aa18.83■□□□□ 0.6
TRAF4-201ENST00000262395 CYP26B1Q9NR63 512 aa18.83■□□□□ 0.6
TRAF4-201ENST00000262395 ARHGAP28Q9P2N2 729 aa18.83■□□□□ 0.6
TRAF4-201ENST00000262395 MARCOQ9UEW3 520 aaPredicted RBP18.83■□□□□ 0.6
TRAF4-201ENST00000262395 STBD1O95210 358 aa18.82■□□□□ 0.6
TRAF4-201ENST00000262395 TNFSF9P41273 254 aa18.82■□□□□ 0.6
TRAF4-201ENST00000262395 ELK3P41970 407 aa18.82■□□□□ 0.6
TRAF4-201ENST00000262395 YWHAGP61981 247 aaKnown RBP eCLIP18.82■□□□□ 0.6
TRAF4-201ENST00000262395 DRICH1Q6PGQ1 229 aaPredicted RBP18.82■□□□□ 0.6
TRAF4-201ENST00000262395 SLC35B2Q8TB61 432 aa18.82■□□□□ 0.6
TRAF4-201ENST00000262395 NKD2Q969F2 451 aaPredicted RBP18.82■□□□□ 0.6
TRAF4-201ENST00000262395 NMUR2Q9GZQ4 415 aa18.82■□□□□ 0.6
TRAF4-201ENST00000262395 SNCAIPQ9Y6H5 919 aa18.82■□□□□ 0.6
TRAF4-201ENST00000262395 PSMG1O95456 288 aa18.82■□□□□ 0.6
TRAF4-201ENST00000262395 PSMA2P25787 234 aa18.82■□□□□ 0.6
TRAF4-201ENST00000262395 KBTBD12Q3ZCT8 623 aa18.82■□□□□ 0.6
TRAF4-201ENST00000262395 NAT8LQ8N9F0 302 aa18.82■□□□□ 0.6
TRAF4-201ENST00000262395 TFAP2BQ92481 460 aa18.82■□□□□ 0.6
TRAF4-201ENST00000262395 STMN2Q93045 179 aa18.82■□□□□ 0.6
TRAF4-201ENST00000262395 H0YIN7 160 aa18.81■□□□□ 0.6
TRAF4-201ENST00000262395 FCHO1O14526 889 aa18.81■□□□□ 0.6
TRAF4-201ENST00000262395 ENO1P06733 434 aaKnown RBP18.81■□□□□ 0.6
TRAF4-201ENST00000262395 SLC27A3Q5K4L6 730 aa18.81■□□□□ 0.6
TRAF4-201ENST00000262395 MEX3CQ5U5Q3 659 aaKnown RBP18.81■□□□□ 0.6
TRAF4-201ENST00000262395 NPNTQ6UXI9 565 aa18.81■□□□□ 0.6
TRAF4-201ENST00000262395 LRRC74BQ6ZQY2 392 aa18.81■□□□□ 0.6
TRAF4-201ENST00000262395 WDTC1Q8N5D0 677 aa18.81■□□□□ 0.6
TRAF4-201ENST00000262395 HSPH1Q92598 858 aa18.81■□□□□ 0.6
TRAF4-201ENST00000262395 FAM161BQ96MY7 647 aa18.81■□□□□ 0.6
TRAF4-201ENST00000262395 ANKRD27Q96NW4 1050 aa18.81■□□□□ 0.6
TRAF4-201ENST00000262395 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.81■□□□□ 0.67e-6■■■□□ 16.5
TRAF4-201ENST00000262395 C2CD2Q9Y426 696 aa18.81■□□□□ 0.6
TRAF4-201ENST00000262395 COL11A2P13942 1736 aaPredicted RBP18.81■□□□□ 0.6
TRAF4-201ENST00000262395 K7ERI5 159 aa18.81■□□□□ 0.6
TRAF4-201ENST00000262395 PLA2G6O60733 806 aa18.81■□□□□ 0.6
TRAF4-201ENST00000262395 DGAT1O75907 488 aa18.81■□□□□ 0.6
TRAF4-201ENST00000262395 MAP3K6O95382 1288 aa18.81■□□□□ 0.6
TRAF4-201ENST00000262395 MYL6P60660 151 aa18.81■□□□□ 0.6
TRAF4-201ENST00000262395 CDK16Q00536 496 aa18.81■□□□□ 0.6
TRAF4-201ENST00000262395 CDHR3Q6ZTQ4 885 aa18.81■□□□□ 0.6
TRAF4-201ENST00000262395 CTAGE3PQ8IX95 158 aa18.81■□□□□ 0.6
TRAF4-201ENST00000262395 KIAA0319LQ8IZA0 1049 aa18.81■□□□□ 0.6
TRAF4-201ENST00000262395 ARFGAP1Q8N6T3 406 aa18.81■□□□□ 0.6
TRAF4-201ENST00000262395 CFAP36Q96G28 342 aa18.81■□□□□ 0.6
TRAF4-201ENST00000262395 IKBKGQ9Y6K9 419 aa18.81■□□□□ 0.6
TRAF4-201ENST00000262395 KLHL33A6NCF5 533 aa18.8■□□□□ 0.6
TRAF4-201ENST00000262395 SIGLEC16A6NMB1 481 aa18.8■□□□□ 0.6
TRAF4-201ENST00000262395 H3BRJ5 948 aa18.8■□□□□ 0.6
TRAF4-201ENST00000262395 MCL1Q07820 350 aa18.8■□□□□ 0.6
TRAF4-201ENST00000262395 CCDC62Q6P9F0 684 aa18.8■□□□□ 0.6
TRAF4-201ENST00000262395 PRPF39Q86UA1 669 aaKnown RBP18.8■□□□□ 0.6
TRAF4-201ENST00000262395 KBTBD2Q8IY47 623 aa18.8■□□□□ 0.6
TRAF4-201ENST00000262395 ATP6V0A1Q93050 837 aa18.8■□□□□ 0.6
TRAF4-201ENST00000262395 FAM136AQ96C01 138 aa18.8■□□□□ 0.6
TRAF4-201ENST00000262395 DEFB129Q9H1M3 183 aa18.8■□□□□ 0.6
TRAF4-201ENST00000262395 CPSF2Q9P2I0 782 aaKnown RBP18.8■□□□□ 0.6
TRAF4-201ENST00000262395 NFASCO94856 1347 aa18.8■□□□□ 0.6
TRAF4-201ENST00000262395 DOCK5Q9H7D0 1870 aa18.8■□□□□ 0.6
TRAF4-201ENST00000262395 C3orf70A6NLC5 250 aaPredicted RBP18.8■□□□□ 0.6
TRAF4-201ENST00000262395 KBTBD13C9JR72 458 aa18.8■□□□□ 0.6
TRAF4-201ENST00000262395 IRF6O14896 467 aa18.8■□□□□ 0.6
TRAF4-201ENST00000262395 NR3C2P08235 984 aa18.8■□□□□ 0.6
TRAF4-201ENST00000262395 DLDP09622 509 aaKnown RBP18.8■□□□□ 0.6
TRAF4-201ENST00000262395 UBTFL6P0CB48 400 aaPredicted RBP18.8■□□□□ 0.6
TRAF4-201ENST00000262395 PGM1P36871 562 aa18.8■□□□□ 0.6
TRAF4-201ENST00000262395 KDSRQ06136 332 aa18.8■□□□□ 0.6
TRAF4-201ENST00000262395 KLHL38Q2WGJ6 581 aa18.8■□□□□ 0.6
TRAF4-201ENST00000262395 RFX6Q8HWS3 928 aa18.8■□□□□ 0.6
TRAF4-201ENST00000262395 PDIK1LQ8N165 341 aa18.8■□□□□ 0.6
TRAF4-201ENST00000262395 MCPH1Q8NEM0 835 aa18.8■□□□□ 0.6
TRAF4-201ENST00000262395 CALN1Q9BXU9 219 aa18.8■□□□□ 0.6
TRAF4-201ENST00000262395 MTMR12Q9C0I1 747 aa18.8■□□□□ 0.6
TRAF4-201ENST00000262395 ZCWPW1Q9H0M4 648 aa18.8■□□□□ 0.6
TRAF4-201ENST00000262395 VPS11Q9H270 941 aa18.8■□□□□ 0.6
TRAF4-201ENST00000262395 SLC38A10Q9HBR0 1119 aa18.8■□□□□ 0.6
TRAF4-201ENST00000262395 PAPOLBQ9NRJ5 636 aaKnown RBP18.8■□□□□ 0.6
TRAF4-201ENST00000262395 B2RBV5 119 aa18.8■□□□□ 0.6
TRAF4-201ENST00000262395 LMNAP02545 664 aaKnown RBP18.8■□□□□ 0.6
TRAF4-201ENST00000262395 CLDN10P78369 228 aa18.8■□□□□ 0.6
TRAF4-201ENST00000262395 FAXCQ5TGI0 409 aa18.8■□□□□ 0.6
TRAF4-201ENST00000262395 SLC30A9Q6PML9 568 aa18.8■□□□□ 0.6
TRAF4-201ENST00000262395 SLC25A41Q8N5S1 370 aa18.8■□□□□ 0.6
TRAF4-201ENST00000262395 ZNF526Q8TF50 670 aaPredicted RBP18.8■□□□□ 0.6
TRAF4-201ENST00000262395 SKA1Q96BD8 255 aa18.8■□□□□ 0.6
TRAF4-201ENST00000262395 TCHPQ9BT92 498 aa18.8■□□□□ 0.6
TRAF4-201ENST00000262395 SLC13A1Q9BZW2 595 aa18.8■□□□□ 0.6
TRAF4-201ENST00000262395 SLC9A2Q9UBY0 812 aa18.8■□□□□ 0.6
TRAF4-201ENST00000262395 TCRBV9S1A1TA0A576 114 aa18.79■□□□□ 0.6
TRAF4-201ENST00000262395 CD19P15391 556 aa18.79■□□□□ 0.6
TRAF4-201ENST00000262395 POLE2P56282 527 aa18.79■□□□□ 0.6
TRAF4-201ENST00000262395 SLC34A1Q06495 639 aa18.79■□□□□ 0.6
TRAF4-201ENST00000262395 EMC2Q15006 297 aa18.79■□□□□ 0.6
TRAF4-201ENST00000262395 RASA2Q15283 850 aa18.79■□□□□ 0.6
TRAF4-201ENST00000262395 RBBP5Q15291 538 aaKnown RBP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms