RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 NXF1Q9UBU9 619 aaKnown RBP16.62■□□□□ 0.25
PRPF40B-201ENST00000261897 CCDC78A2IDD5 438 aa16.62■□□□□ 0.25
PRPF40B-201ENST00000261897 POLR2MP0CAP2 368 aa16.62■□□□□ 0.25
PRPF40B-201ENST00000261897 ALAS1P13196 640 aa16.62■□□□□ 0.25
PRPF40B-201ENST00000261897 SLC1A1P43005 524 aa16.62■□□□□ 0.25
PRPF40B-201ENST00000261897 ATP1A4Q13733 1029 aa16.62■□□□□ 0.25
PRPF40B-201ENST00000261897 KRT81Q14533 505 aa16.62■□□□□ 0.25
PRPF40B-201ENST00000261897 EMC1Q8N766 993 aa16.62■□□□□ 0.25
PRPF40B-201ENST00000261897 GATA6Q92908 595 aa16.62■□□□□ 0.25
PRPF40B-201ENST00000261897 GLT8D2Q9H1C3 349 aa16.62■□□□□ 0.25
PRPF40B-201ENST00000261897 SEMA6AQ9H2E6 1030 aa16.62■□□□□ 0.25
PRPF40B-201ENST00000261897 TMEM206Q9H813 350 aa16.62■□□□□ 0.25
PRPF40B-201ENST00000261897 SLC9A2Q9UBY0 812 aa16.62■□□□□ 0.25
PRPF40B-201ENST00000261897 LGALS13Q9UHV8 139 aa16.62■□□□□ 0.25
PRPF40B-201ENST00000261897 MEIS2O14770 477 aa16.61■□□□□ 0.25
PRPF40B-201ENST00000261897 DCXO43602 365 aa16.61■□□□□ 0.25
PRPF40B-201ENST00000261897 TFPTP0C1Z6 253 aa16.61■□□□□ 0.25
PRPF40B-201ENST00000261897 TMEM259Q4ZIN3 620 aa16.61■□□□□ 0.25
PRPF40B-201ENST00000261897 SYDE2Q5VT97 1194 aa16.61■□□□□ 0.25
PRPF40B-201ENST00000261897 SV2AQ7L0J3 742 aa16.61■□□□□ 0.25
PRPF40B-201ENST00000261897 HACE1Q8IYU2 909 aa16.61■□□□□ 0.25
PRPF40B-201ENST00000261897 SERAC1Q96JX3 654 aa16.61■□□□□ 0.25
PRPF40B-201ENST00000261897 OLFML3Q9NRN5 406 aa16.61■□□□□ 0.25
PRPF40B-201ENST00000261897 RGPD5Q99666 1765 aa16.61■□□□□ 0.25
PRPF40B-201ENST00000261897 STAM2O75886 525 aa16.61■□□□□ 0.25
PRPF40B-201ENST00000261897 GH2P01242 217 aa16.61■□□□□ 0.25
PRPF40B-201ENST00000261897 FDX1P10109 184 aa16.61■□□□□ 0.25
PRPF40B-201ENST00000261897 COPAP53621 1224 aa16.61■□□□□ 0.25
PRPF40B-201ENST00000261897 NCKAP1LP55160 1127 aa16.61■□□□□ 0.25
PRPF40B-201ENST00000261897 MSS51Q4VC12 460 aa16.61■□□□□ 0.25
PRPF40B-201ENST00000261897 MCF2LO15068 1137 aa16.6■□□□□ 0.25
PRPF40B-201ENST00000261897 PROSCO94903 275 aa16.6■□□□□ 0.25
PRPF40B-201ENST00000261897 RBP3P10745 1247 aa16.6■□□□□ 0.25
PRPF40B-201ENST00000261897 RARBP10826 455 aa16.6■□□□□ 0.25
PRPF40B-201ENST00000261897 LIG4P49917 911 aa16.6■□□□□ 0.25
PRPF40B-201ENST00000261897 CENPCQ03188 943 aa16.6■□□□□ 0.25
PRPF40B-201ENST00000261897 SEPT6Q14141 434 aa16.6■□□□□ 0.25
PRPF40B-201ENST00000261897 SF3B3Q15393 1217 aaKnown RBP16.6■□□□□ 0.25
PRPF40B-201ENST00000261897 TXNRD3NBQ6F5E7 133 aa16.6■□□□□ 0.25
PRPF40B-201ENST00000261897 RHBDF2Q6PJF5 856 aa16.6■□□□□ 0.25
PRPF40B-201ENST00000261897 C1orf186Q6ZWK4 172 aa16.6■□□□□ 0.25
PRPF40B-201ENST00000261897 BRINP3Q76B58 766 aa16.6■□□□□ 0.25
PRPF40B-201ENST00000261897 PSPC1Q8WXF1 523 aaKnown RBP16.6■□□□□ 0.25
PRPF40B-201ENST00000261897 NR1H4Q96RI1 486 aaPredicted RBP16.6■□□□□ 0.25
PRPF40B-201ENST00000261897 EIF2AK2P19525 551 aaKnown RBP16.6■□□□□ 0.25
PRPF40B-201ENST00000261897 CHN2P52757 468 aa16.6■□□□□ 0.25
PRPF40B-201ENST00000261897 EIF3EP60228 445 aaKnown RBP16.6■□□□□ 0.25
PRPF40B-201ENST00000261897 GPSM2P81274 684 aa16.6■□□□□ 0.25
PRPF40B-201ENST00000261897 ANO4Q32M45 955 aa16.6■□□□□ 0.25
PRPF40B-201ENST00000261897 MAP7D1Q3KQU3 841 aa16.6■□□□□ 0.25
PRPF40B-201ENST00000261897 TMA16Q96EY4 203 aaKnown RBP16.6■□□□□ 0.25
PRPF40B-201ENST00000261897 ZNF180Q9UJW8 692 aa16.6■□□□□ 0.25
PRPF40B-201ENST00000261897 SOX13Q9UN79 622 aa16.6■□□□□ 0.25
PRPF40B-201ENST00000261897 ARHGAP26Q9UNA1 814 aa16.6■□□□□ 0.25
PRPF40B-201ENST00000261897 UBR1Q8IWV7 1749 aa16.6■□□□□ 0.25
PRPF40B-201ENST00000261897 ZNF862O60290 1169 aa16.6■□□□□ 0.25
PRPF40B-201ENST00000261897 GRAP2O75791 330 aa16.6■□□□□ 0.25
PRPF40B-201ENST00000261897 CSPG5O95196 566 aa16.6■□□□□ 0.25
PRPF40B-201ENST00000261897 FOSP01100 380 aaPredicted RBP16.6■□□□□ 0.25
PRPF40B-201ENST00000261897 NUDT2P50583 147 aa16.6■□□□□ 0.25
PRPF40B-201ENST00000261897 CYP1B1Q16678 543 aa16.6■□□□□ 0.25
PRPF40B-201ENST00000261897 CLEC16AQ2KHT3 1053 aa16.6■□□□□ 0.25
PRPF40B-201ENST00000261897 AMIGO2Q86SJ2 522 aa16.6■□□□□ 0.25
PRPF40B-201ENST00000261897 ZFPM1Q8IX07 1006 aa16.6■□□□□ 0.25
PRPF40B-201ENST00000261897 DCLK2Q8N568 766 aa16.6■□□□□ 0.25
PRPF40B-201ENST00000261897 DEPDC1BQ8WUY9 529 aa16.6■□□□□ 0.25
PRPF40B-201ENST00000261897 UNC45AQ9H3U1 944 aa16.6■□□□□ 0.25
PRPF40B-201ENST00000261897 RBMX2Q9Y388 322 aaKnown RBP16.6■□□□□ 0.25
PRPF40B-201ENST00000261897 A8MXQ7 604 aa16.59■□□□□ 0.25
PRPF40B-201ENST00000261897 CASQ2O14958 399 aaPredicted RBP16.59■□□□□ 0.25
PRPF40B-201ENST00000261897 EIF3DO15371 548 aaKnown RBP eCLIP16.59■□□□□ 0.25
PRPF40B-201ENST00000261897 CYP3A4P08684 503 aa16.59■□□□□ 0.25
PRPF40B-201ENST00000261897 CBX3Q13185 183 aa16.59■□□□□ 0.25
PRPF40B-201ENST00000261897 DMP1Q13316 513 aaPredicted RBP16.59■□□□□ 0.25
PRPF40B-201ENST00000261897 C6orf52Q5T4I8 152 aa16.59■□□□□ 0.25
PRPF40B-201ENST00000261897 P2RX7Q99572 595 aaKnown RBP16.59■□□□□ 0.25
PRPF40B-201ENST00000261897 ZC3H7BQ9UGR2 993 aaKnown RBP16.59■□□□□ 0.25
PRPF40B-201ENST00000261897 ACTL7BQ9Y614 415 aa16.59■□□□□ 0.25
PRPF40B-201ENST00000261897 TCRBV7S3A2A0A539 114 aa16.59■□□□□ 0.25
PRPF40B-201ENST00000261897 TBL3Q12788 808 aaKnown RBP16.59■□□□□ 0.25
PRPF40B-201ENST00000261897 B3GNT6Q6ZMB0 384 aa16.59■□□□□ 0.25
PRPF40B-201ENST00000261897 FAM71AQ8IYT1 594 aa16.59■□□□□ 0.25
PRPF40B-201ENST00000261897 CATSPER2Q96P56 530 aa16.59■□□□□ 0.25
PRPF40B-201ENST00000261897 ADA2Q9NZK5 511 aa16.59■□□□□ 0.25
PRPF40B-201ENST00000261897 LRP6O75581 1613 aa16.59■□□□□ 0.25
PRPF40B-201ENST00000261897 TPST1O60507 370 aa16.59■□□□□ 0.25
PRPF40B-201ENST00000261897 CYP1A2P05177 515 aa16.59■□□□□ 0.25
PRPF40B-201ENST00000261897 ABCG1P45844 678 aa16.59■□□□□ 0.25
PRPF40B-201ENST00000261897 GDF10P55107 478 aa16.59■□□□□ 0.25
PRPF40B-201ENST00000261897 GSTA3Q16772 222 aa16.59■□□□□ 0.25
PRPF40B-201ENST00000261897 DPY19L2P1Q6NXN4 242 aa16.59■□□□□ 0.25
PRPF40B-201ENST00000261897 RNF169Q8NCN4 708 aa16.59■□□□□ 0.25
PRPF40B-201ENST00000261897 TRPV6Q9H1D0 765 aa16.59■□□□□ 0.25
PRPF40B-201ENST00000261897 WRAP73Q9P2S5 460 aaPredicted RBP16.59■□□□□ 0.25
PRPF40B-201ENST00000261897 NOCTQ9UK39 431 aaKnown RBP16.59■□□□□ 0.25
PRPF40B-201ENST00000261897 LRRIQ4A6NIV6 560 aa16.58■□□□□ 0.25
PRPF40B-201ENST00000261897 NDC80O14777 642 aa16.58■□□□□ 0.25
PRPF40B-201ENST00000261897 LIASO43766 372 aa16.58■□□□□ 0.25
PRPF40B-201ENST00000261897 F7P08709 466 aaPredicted RBP16.58■□□□□ 0.25
PRPF40B-201ENST00000261897 RPS6P62753 249 aaKnown RBP16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms