RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 PAFAH2Q99487 392 aa17.17■□□□□ 0.34
TM9SF1-201ENST00000261789 NPHS2Q9NP85 383 aa17.17■□□□□ 0.34
TM9SF1-201ENST00000261789 PCDHGC3Q9UN70 934 aa17.17■□□□□ 0.34
TM9SF1-201ENST00000261789 SMG5Q9UPR3 1016 aaKnown RBP17.17■□□□□ 0.34
TM9SF1-201ENST00000261789 SNCAIPQ9Y6H5 919 aa17.17■□□□□ 0.34
TM9SF1-201ENST00000261789 ERBB2P04626 1255 aa17.16■□□□□ 0.34
TM9SF1-201ENST00000261789 CDC25CP30307 473 aa17.16■□□□□ 0.34
TM9SF1-201ENST00000261789 CDH5P33151 784 aaPredicted RBP17.16■□□□□ 0.34
TM9SF1-201ENST00000261789 PTPN7P35236 360 aa17.16■□□□□ 0.34
TM9SF1-201ENST00000261789 YARSP54577 528 aaKnown RBP17.16■□□□□ 0.34
TM9SF1-201ENST00000261789 HSDL1Q3SXM5 330 aa17.16■□□□□ 0.34
TM9SF1-201ENST00000261789 PLEKHG4Q58EX7 1191 aa17.16■□□□□ 0.34
TM9SF1-201ENST00000261789 EFHC2Q5JST6 749 aa17.16■□□□□ 0.34
TM9SF1-201ENST00000261789 SH3PXD2AQ5TCZ1 1133 aa17.16■□□□□ 0.34
TM9SF1-201ENST00000261789 EEF1DP3Q658K8 133 aa17.16■□□□□ 0.34
TM9SF1-201ENST00000261789 NPNTQ6UXI9 565 aa17.16■□□□□ 0.34
TM9SF1-201ENST00000261789 CCDC125Q86Z20 511 aa17.16■□□□□ 0.34
TM9SF1-201ENST00000261789 IGDCC3Q8IVU1 814 aa17.16■□□□□ 0.34
TM9SF1-201ENST00000261789 PPIL6Q8IXY8 311 aa17.16■□□□□ 0.34
TM9SF1-201ENST00000261789 CNKSR2Q8WXI2 1034 aa17.16■□□□□ 0.34
TM9SF1-201ENST00000261789 KLRG1Q96E93 195 aa17.16■□□□□ 0.34
TM9SF1-201ENST00000261789 CALN1Q9BXU9 219 aa17.16■□□□□ 0.34
TM9SF1-201ENST00000261789 ZNF518BQ9C0D4 1074 aa17.16■□□□□ 0.34
TM9SF1-201ENST00000261789 SYNCQ9H7C4 482 aa17.16■□□□□ 0.34
TM9SF1-201ENST00000261789 BTBD7Q9P203 1132 aa17.16■□□□□ 0.34
TM9SF1-201ENST00000261789 SLC17A7Q9P2U7 560 aa17.16■□□□□ 0.34
TM9SF1-201ENST00000261789 DCTN4Q9UJW0 460 aa17.16■□□□□ 0.34
TM9SF1-201ENST00000261789 C15orf41Q9Y2V0 281 aa17.16■□□□□ 0.34
TM9SF1-201ENST00000261789 USH1CQ9Y6N9 552 aa17.16■□□□□ 0.34
TM9SF1-201ENST00000261789 KAT6AQ92794 2004 aa17.16■□□□□ 0.34
TM9SF1-201ENST00000261789 SOWAHBA6NEL2 793 aa17.16■□□□□ 0.34
TM9SF1-201ENST00000261789 SIGLEC16A6NMB1 481 aa17.16■□□□□ 0.34
TM9SF1-201ENST00000261789 ARIH2O95376 493 aa17.16■□□□□ 0.34
TM9SF1-201ENST00000261789 T-ENOLP0DO92 83 aa17.16■□□□□ 0.34
TM9SF1-201ENST00000261789 CXCL8P10145 99 aa17.16■□□□□ 0.34
TM9SF1-201ENST00000261789 BASP1P80723 227 aaKnown RBP17.16■□□□□ 0.34
TM9SF1-201ENST00000261789 MMRN1Q13201 1228 aa17.16■□□□□ 0.34
TM9SF1-201ENST00000261789 TMEM132AQ24JP5 1023 aa17.16■□□□□ 0.34
TM9SF1-201ENST00000261789 RFX6Q8HWS3 928 aa17.16■□□□□ 0.34
TM9SF1-201ENST00000261789 KCTD6Q8NC69 237 aa17.16■□□□□ 0.34
TM9SF1-201ENST00000261789 DNERQ8NFT8 737 aa17.16■□□□□ 0.34
TM9SF1-201ENST00000261789 TCP10LQ8TDR4 215 aa17.16■□□□□ 0.34
TM9SF1-201ENST00000261789 C10orf82Q8WW14 230 aa17.16■□□□□ 0.34
TM9SF1-201ENST00000261789 KCNN1Q92952 543 aa17.16■□□□□ 0.34
TM9SF1-201ENST00000261789 SDCBP2Q9H190 292 aa17.16■□□□□ 0.34
TM9SF1-201ENST00000261789 SLC24A2Q9UI40 661 aa17.16■□□□□ 0.34
TM9SF1-201ENST00000261789 CHMP2BQ9UQN3 213 aa17.16■□□□□ 0.34
TM9SF1-201ENST00000261789 ARL4CP56559 192 aa17.15■□□□□ 0.34
TM9SF1-201ENST00000261789 CCDC15Q0P6D6 951 aa17.15■□□□□ 0.34
TM9SF1-201ENST00000261789 DALRD3Q5D0E6 543 aaKnown RBP17.15■□□□□ 0.34
TM9SF1-201ENST00000261789 ZC3H18Q86VM9 953 aaKnown RBP17.15■□□□□ 0.34
TM9SF1-201ENST00000261789 KCNV2Q8TDN2 545 aa17.15■□□□□ 0.34
TM9SF1-201ENST00000261789 PPP1R16BQ96T49 567 aa17.15■□□□□ 0.34
TM9SF1-201ENST00000261789 XPO7Q9UIA9 1087 aaKnown RBP17.15■□□□□ 0.34
TM9SF1-201ENST00000261789 BRCA1P38398 1863 aaKnown RBP17.15■□□□□ 0.34
TM9SF1-201ENST00000261789 INO80B-WBP1J3KQ70 363 aa17.15■□□□□ 0.34
TM9SF1-201ENST00000261789 ZBTB7AO95365 584 aa17.15■□□□□ 0.34
TM9SF1-201ENST00000261789 AP3M2P53677 418 aa17.15■□□□□ 0.34
TM9SF1-201ENST00000261789 CLNS1AP54105 237 aaKnown RBP17.15■□□□□ 0.34
TM9SF1-201ENST00000261789 TAP1Q03518 808 aa17.15■□□□□ 0.34
TM9SF1-201ENST00000261789 POLNQ7Z5Q5 900 aa17.15■□□□□ 0.34
TM9SF1-201ENST00000261789 PALM2Q8IXS6 379 aa17.15■□□□□ 0.34
TM9SF1-201ENST00000261789 TRPM4Q8TD43 1214 aa17.15■□□□□ 0.34
TM9SF1-201ENST00000261789 LRRN4Q8WUT4 740 aa17.15■□□□□ 0.34
TM9SF1-201ENST00000261789 INO80BQ9C086 356 aaPredicted RBP17.15■□□□□ 0.34
TM9SF1-201ENST00000261789 ZBTB42B2RXF5 422 aa17.14■□□□□ 0.34
TM9SF1-201ENST00000261789 AVILO75366 819 aa17.14■□□□□ 0.34
TM9SF1-201ENST00000261789 RPS12P25398 132 aaKnown RBP17.14■□□□□ 0.34
TM9SF1-201ENST00000261789 MIPP30301 263 aa17.14■□□□□ 0.34
TM9SF1-201ENST00000261789 EFNA5P52803 228 aa17.14■□□□□ 0.34
TM9SF1-201ENST00000261789 RAD23BP54727 409 aa17.14■□□□□ 0.34
TM9SF1-201ENST00000261789 TAF1BQ53T94 588 aaPredicted RBP17.14■□□□□ 0.34
TM9SF1-201ENST00000261789 BBS12Q6ZW61 710 aa17.14■□□□□ 0.34
TM9SF1-201ENST00000261789 NCAPG2Q86XI2 1143 aa17.14■□□□□ 0.34
TM9SF1-201ENST00000261789 XYLT1Q86Y38 959 aa17.14■□□□□ 0.34
TM9SF1-201ENST00000261789 SEPT1Q8WYJ6 367 aa17.14■□□□□ 0.34
TM9SF1-201ENST00000261789 PTPRN2Q92932 1015 aa17.14■□□□□ 0.34
TM9SF1-201ENST00000261789 SMYD3Q9H7B4 428 aa17.14■□□□□ 0.34
TM9SF1-201ENST00000261789 MINDY3Q9H8M7 445 aa17.14■□□□□ 0.34
TM9SF1-201ENST00000261789 TXLNGQ9NUQ3 528 aa17.14■□□□□ 0.34
TM9SF1-201ENST00000261789 NOP53Q9NZM5 478 aaKnown RBP17.14■□□□□ 0.34
TM9SF1-201ENST00000261789 SENP1Q9P0U3 644 aa17.14■□□□□ 0.34
TM9SF1-201ENST00000261789 NKX1-2Q9UD57 310 aaPredicted RBP17.14■□□□□ 0.34
TM9SF1-201ENST00000261789 MAP3K6O95382 1288 aa17.14■□□□□ 0.33
TM9SF1-201ENST00000261789 IQCF3P0C7M6 154 aa17.14■□□□□ 0.33
TM9SF1-201ENST00000261789 CCND1P24385 295 aa17.14■□□□□ 0.33
TM9SF1-201ENST00000261789 EIF3EP60228 445 aaKnown RBP17.14■□□□□ 0.33
TM9SF1-201ENST00000261789 YWHAEP62258 255 aaKnown RBP17.14■□□□□ 0.33
TM9SF1-201ENST00000261789 ATP11AP98196 1134 aa17.14■□□□□ 0.33
TM9SF1-201ENST00000261789 HADHQ16836 314 aaKnown RBP17.14■□□□□ 0.33
TM9SF1-201ENST00000261789 FAM160B1Q5W0V3 765 aa17.14■□□□□ 0.33
TM9SF1-201ENST00000261789 RGS9BPQ6ZS82 235 aa17.14■□□□□ 0.33
TM9SF1-201ENST00000261789 ATP11CQ8NB49 1132 aa17.14■□□□□ 0.33
TM9SF1-201ENST00000261789 RFWD2Q8NHY2 731 aa17.14■□□□□ 0.33
TM9SF1-201ENST00000261789 ASCC2Q9H1I8 757 aaPredicted RBP17.14■□□□□ 0.33
TM9SF1-201ENST00000261789 SIX4Q9UIU6 781 aa17.14■□□□□ 0.33
TM9SF1-201ENST00000261789 NFICP08651 508 aa17.13■□□□□ 0.33
TM9SF1-201ENST00000261789 KRT7P08729 469 aa17.13■□□□□ 0.33
TM9SF1-201ENST00000261789 RBP3P10745 1247 aa17.13■□□□□ 0.33
TM9SF1-201ENST00000261789 SKIV2L2P42285 1042 aaKnown RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms