RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 CARNMT1Q8N4J0 409 aa14.52□□□□□ -0.09
CDH1-201ENST00000261769 TFB1MQ8WVM0 346 aaKnown RBP14.52□□□□□ -0.09
CDH1-201ENST00000261769 XPO6Q96QU8 1125 aaKnown RBP14.52□□□□□ -0.09
CDH1-201ENST00000261769 DCLK3Q9C098 648 aa14.52□□□□□ -0.09
CDH1-201ENST00000261769 ABCB6Q9NP58 842 aa14.52□□□□□ -0.09
CDH1-201ENST00000261769 AMACRQ9UHK6 382 aa14.52□□□□□ -0.09
CDH1-201ENST00000261769 XRN1Q8IZH2 1706 aaKnown RBP14.51□□□□□ -0.09
CDH1-201ENST00000261769 SPAG6O75602 509 aa14.51□□□□□ -0.09
CDH1-201ENST00000261769 GLRA2P23416 452 aa14.51□□□□□ -0.09
CDH1-201ENST00000261769 RAP1GAPP47736 663 aa14.51□□□□□ -0.09
CDH1-201ENST00000261769 GEMP55040 296 aa14.51□□□□□ -0.09
CDH1-201ENST00000261769 ART3Q13508 389 aa14.51□□□□□ -0.09
CDH1-201ENST00000261769 ACAD11Q709F0 780 aa14.51□□□□□ -0.09
CDH1-201ENST00000261769 KIRREL3Q8IZU9 778 aa14.51□□□□□ -0.09
CDH1-201ENST00000261769 EFHD1Q9BUP0 239 aa14.51□□□□□ -0.09
CDH1-201ENST00000261769 ARHGEF38Q9NXL2 777 aa14.51□□□□□ -0.09
CDH1-201ENST00000261769 FAM50BQ9Y247 325 aa14.51□□□□□ -0.09
CDH1-201ENST00000261769 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.51□□□□□ -0.09
CDH1-201ENST00000261769 ATMINO43313 823 aaPredicted RBP14.51□□□□□ -0.09
CDH1-201ENST00000261769 TLR2O60603 784 aa14.51□□□□□ -0.09
CDH1-201ENST00000261769 PDAP1Q13442 181 aaKnown RBP14.51□□□□□ -0.09
CDH1-201ENST00000261769 STAT4Q14765 748 aa14.51□□□□□ -0.09
CDH1-201ENST00000261769 TBCCQ15814 346 aa14.51□□□□□ -0.09
CDH1-201ENST00000261769 PTRHD1Q6GMV3 140 aaKnown RBP14.51□□□□□ -0.09
CDH1-201ENST00000261769 LMNTD2Q8IXW0 634 aa14.51□□□□□ -0.09
CDH1-201ENST00000261769 FAM172AQ8WUF8 416 aa14.51□□□□□ -0.09
CDH1-201ENST00000261769 ZC3H7BQ9UGR2 993 aaKnown RBP14.51□□□□□ -0.09
CDH1-201ENST00000261769 TPX2Q9ULW0 747 aaKnown RBP14.51□□□□□ -0.09
CDH1-201ENST00000261769 TRIM66O15016 1216 aa14.51□□□□□ -0.09
CDH1-201ENST00000261769 NCF2P19878 526 aaPredicted RBP14.51□□□□□ -0.09
CDH1-201ENST00000261769 RTP1P59025 263 aa14.51□□□□□ -0.09
CDH1-201ENST00000261769 TC2NQ8N9U0 490 aa14.51□□□□□ -0.09
CDH1-201ENST00000261769 C12orf42Q96LP6 360 aa14.51□□□□□ -0.09
CDH1-201ENST00000261769 TSPAN18Q96SJ8 248 aa14.51□□□□□ -0.09
CDH1-201ENST00000261769 IGFLR1Q9H665 355 aa14.51□□□□□ -0.09
CDH1-201ENST00000261769 USH1CQ9Y6N9 552 aa14.51□□□□□ -0.09
CDH1-201ENST00000261769 ROBO3Q96MS0 1386 aa14.51□□□□□ -0.09
CDH1-201ENST00000261769 SMIM35A0A1B0GVV1 85 aa14.5□□□□□ -0.09
CDH1-201ENST00000261769 SEPT4O43236 478 aa14.5□□□□□ -0.09
CDH1-201ENST00000261769 LZTS3O60299 673 aaPredicted RBP14.5□□□□□ -0.09
CDH1-201ENST00000261769 SLC12A3P55017 1021 aa14.5□□□□□ -0.09
CDH1-201ENST00000261769 PTK2BQ14289 1009 aa14.5□□□□□ -0.09
CDH1-201ENST00000261769 KIF19Q2TAC6 998 aa14.5□□□□□ -0.09
CDH1-201ENST00000261769 IL31RAQ8NI17 732 aa14.5□□□□□ -0.09
CDH1-201ENST00000261769 SERPINB11Q96P15 392 aa14.5□□□□□ -0.09
CDH1-201ENST00000261769 BLOC1S4Q9NUP1 217 aa14.5□□□□□ -0.09
CDH1-201ENST00000261769 SENP1Q9P0U3 644 aa14.5□□□□□ -0.09
CDH1-201ENST00000261769 ST3GAL5Q9UNP4 418 aa14.5□□□□□ -0.09
CDH1-201ENST00000261769 STK38LQ9Y2H1 464 aa14.5□□□□□ -0.09
CDH1-201ENST00000261769 SNCAIPQ9Y6H5 919 aa14.5□□□□□ -0.09
CDH1-201ENST00000261769 ADH1AP07327 375 aa14.5□□□□□ -0.09
CDH1-201ENST00000261769 MMEP08473 750 aa14.5□□□□□ -0.09
CDH1-201ENST00000261769 RPL9P32969 192 aaKnown RBP14.5□□□□□ -0.09
CDH1-201ENST00000261769 ARMC6Q6NXE6 501 aa14.5□□□□□ -0.09
CDH1-201ENST00000261769 EPM2AIP1Q7L775 607 aaPredicted RBP14.5□□□□□ -0.09
CDH1-201ENST00000261769 RNF135Q8IUD6 432 aa14.5□□□□□ -0.09
CDH1-201ENST00000261769 RSRC1Q96IZ7 334 aaKnown RBP14.5□□□□□ -0.09
CDH1-201ENST00000261769 PURBQ96QR8 312 aaKnown RBP14.5□□□□□ -0.09
CDH1-201ENST00000261769 STN1Q9H668 368 aaKnown RBP14.5□□□□□ -0.09
CDH1-201ENST00000261769 TSPAN16Q9UKR8 245 aa14.5□□□□□ -0.09
CDH1-201ENST00000261769 GIT1Q9Y2X7 761 aa14.5□□□□□ -0.09
CDH1-201ENST00000261769 MYOM1P52179 1685 aa14.5□□□□□ -0.09
CDH1-201ENST00000261769 SMIM22K7EJ46 135 aa14.5□□□□□ -0.09
CDH1-201ENST00000261769 SLC9A3R1O14745 358 aaPredicted RBP14.5□□□□□ -0.09
CDH1-201ENST00000261769 CASQ2O14958 399 aaPredicted RBP14.5□□□□□ -0.09
CDH1-201ENST00000261769 FARP2O94887 1054 aaPredicted RBP14.5□□□□□ -0.09
CDH1-201ENST00000261769 SNHG28P0DPA3 235 aa14.5□□□□□ -0.09
CDH1-201ENST00000261769 CD44P16070 742 aaKnown RBP14.5□□□□□ -0.09
CDH1-201ENST00000261769 ACAT1P24752 427 aaKnown RBP14.5□□□□□ -0.09
CDH1-201ENST00000261769 KLK7P49862 253 aa14.5□□□□□ -0.09
CDH1-201ENST00000261769 MTFR1Q15390 333 aa14.5□□□□□ -0.09
CDH1-201ENST00000261769 ANKS3Q6ZW76 656 aa14.5□□□□□ -0.09
CDH1-201ENST00000261769 UNC93AQ86WB7 457 aa14.5□□□□□ -0.09
CDH1-201ENST00000261769 KIAA0319LQ8IZA0 1049 aa14.5□□□□□ -0.09
CDH1-201ENST00000261769 TRIM55Q9BYV6 548 aa14.5□□□□□ -0.09
CDH1-201ENST00000261769 CRLS1Q9UJA2 301 aa14.5□□□□□ -0.09
CDH1-201ENST00000261769 TXNDC9O14530 226 aa14.5□□□□□ -0.09
CDH1-201ENST00000261769 SEC31AO94979 1220 aaKnown RBP14.5□□□□□ -0.09
CDH1-201ENST00000261769 GFAPP14136 432 aa14.5□□□□□ -0.09
CDH1-201ENST00000261769 FDFT1P37268 417 aa14.5□□□□□ -0.09
CDH1-201ENST00000261769 MLH1P40692 756 aa14.5□□□□□ -0.09
CDH1-201ENST00000261769 PTENP60484 403 aa14.5□□□□□ -0.09
CDH1-201ENST00000261769 PTK6Q13882 451 aa14.5□□□□□ -0.09
CDH1-201ENST00000261769 ZNF467Q7Z7K2 595 aaPredicted RBP14.5□□□□□ -0.09
CDH1-201ENST00000261769 CSGALNACT1Q8TDX6 532 aa14.5□□□□□ -0.09
CDH1-201ENST00000261769 CARD9Q9H257 536 aa14.5□□□□□ -0.09
CDH1-201ENST00000261769 TRIM45Q9H8W5 580 aaPredicted RBP14.5□□□□□ -0.09
CDH1-201ENST00000261769 G3BP2Q9UN86 482 aaKnown RBP14.5□□□□□ -0.09
CDH1-201ENST00000261769 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.49□□□□□ -0.09
CDH1-201ENST00000261769 MAP3K13O43283 966 aa14.49□□□□□ -0.09
CDH1-201ENST00000261769 TLL1O43897 1013 aa14.49□□□□□ -0.09
CDH1-201ENST00000261769 CAPN15O75808 1086 aa14.49□□□□□ -0.09
CDH1-201ENST00000261769 POLBP06746 335 aa14.49□□□□□ -0.09
CDH1-201ENST00000261769 SERPINB9P50453 376 aa14.49□□□□□ -0.09
CDH1-201ENST00000261769 TBX4P57082 545 aa14.49□□□□□ -0.09
CDH1-201ENST00000261769 C1QBPQ07021 282 aaKnown RBP14.49□□□□□ -0.09
CDH1-201ENST00000261769 ANGPTL8Q6UXH0 198 aa14.49□□□□□ -0.09
CDH1-201ENST00000261769 SLC25A41Q8N5S1 370 aa14.49□□□□□ -0.09
CDH1-201ENST00000261769 PGLYRP2Q96PD5 576 aa14.49□□□□□ -0.09
CDH1-201ENST00000261769 XAB2Q9HCS7 855 aaKnown RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms