RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 ARFIP2P53365 341 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 PKP1Q13835 747 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 CYP4A22Q5TCH4 519 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 PAPD7Q5XG87 772 aaKnown RBP4.49□□□□□ -1.69
VPS13C-202ENST00000261517 E4F1Q66K89 784 aaPredicted RBP4.49□□□□□ -1.69
VPS13C-202ENST00000261517 CCT7Q99832 543 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 DHX35Q9H5Z1 703 aaKnown RBP4.49□□□□□ -1.69
VPS13C-202ENST00000261517 RMND5AQ9H871 391 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 TLR8Q9NR97 1041 aaKnown RBP4.49□□□□□ -1.69
VPS13C-202ENST00000261517 PKD2L2Q9NZM6 624 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 CDYLQ9Y232 598 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 PCDHGC5Q9Y5F6 944 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 COL2A1P02458 1487 aaPredicted RBP4.49□□□□□ -1.69
VPS13C-202ENST00000261517 USP54Q70EL1 1684 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 ADCY6O43306 1168 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 CREB3O43889 395 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 CYP2D6P10635 497 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 BMT2Q1RMZ1 405 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 CCDC149Q6ZUS6 474 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 PTCD2Q8WV60 388 aaKnown RBP4.49□□□□□ -1.69
VPS13C-202ENST00000261517 MRPS31Q92665 395 aaKnown RBP4.49□□□□□ -1.69
VPS13C-202ENST00000261517 ZSWIM1Q9BR11 485 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 C11orf70Q9BRQ4 267 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 L2HGDHQ9H9P8 463 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 PDGFCQ9NRA1 345 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 GGA3Q9NZ52 723 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 SOX13Q9UN79 622 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 A0A088AWK7 358 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 TDP2O95551 362 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 AKR1A1P14550 325 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 ZNF10P21506 573 aaPredicted RBP4.49□□□□□ -1.69
VPS13C-202ENST00000261517 MARK3P27448 753 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 NPY2RP49146 381 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 CYP24A1Q07973 514 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 MSLNQ13421 630 aaPredicted RBP4.49□□□□□ -1.69
VPS13C-202ENST00000261517 MEA1Q16626 185 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 CDKAL1Q5VV42 579 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 EFCAB12Q6NXP0 572 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 MAML1Q92585 1016 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 NOVA2Q9UNW9 492 aaKnown RBP4.49□□□□□ -1.69
VPS13C-202ENST00000261517 CORO2BQ9UQ03 480 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 FAM32AQ9Y421 112 aaKnown RBP4.49□□□□□ -1.69
VPS13C-202ENST00000261517 KIF1CO43896 1103 aaKnown RBP4.48□□□□□ -1.69
VPS13C-202ENST00000261517 CRABP2P29373 138 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 HYIQ5T013 277 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.48□□□□□ -1.69
VPS13C-202ENST00000261517 GDAP1Q8TB36 358 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 PTPRN2Q92932 1015 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 C2CD2Q9Y426 696 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 USP15Q9Y4E8 981 aaPredicted RBP4.48□□□□□ -1.69
VPS13C-202ENST00000261517 TCRBV5S4A2TA0A5A2 114 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 LRG1P02750 347 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 RARGP13631 454 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 PDGFRAP16234 1089 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 GIT2Q14161 759 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 TMEM169Q96HH4 297 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 TRABDQ9H4I3 376 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 PYCARDQ9ULZ3 195 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 AGAP1Q9UPQ3 857 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 HPS5Q9UPZ3 1129 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 ALS2Q96Q42 1657 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 CCDC189A1A4V9 331 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 VPS41P49754 854 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 GNA13Q14344 377 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 KPNB1Q14974 876 aaKnown RBP4.48□□□□□ -1.69
VPS13C-202ENST00000261517 ANGEL2Q5VTE6 544 aaKnown RBP4.48□□□□□ -1.69
VPS13C-202ENST00000261517 ZNF720Q7Z2F6 126 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 RAPGEF5Q92565 580 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 N4BP2L2Q92802 583 aaPredicted RBP4.48□□□□□ -1.69
VPS13C-202ENST00000261517 HSFY1Q96LI6 401 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 NEUROG2Q9H2A3 272 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 ZNF556Q9HAH1 456 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 COMMD8Q9NX08 183 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 MYMKA6NI61 221 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 THP07101 528 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 C4BPBP20851 252 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 PDAP1Q13442 181 aaKnown RBP4.48□□□□□ -1.69
VPS13C-202ENST00000261517 TP53BP2Q13625 1128 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 CACHD1Q5VU97 1274 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 POLNQ7Z5Q5 900 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 SMYD4Q8IYR2 804 aaPredicted RBP4.48□□□□□ -1.69
VPS13C-202ENST00000261517 TPCN2Q8NHX9 752 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 ACMSDQ8TDX5 336 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 DDI1Q8WTU0 396 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 CAMKK2Q96RR4 588 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 SPATC1LQ9H0A9 340 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 CCDC134Q9H6E4 229 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 ZDHHC4Q9NPG8 344 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 NUP98P52948 1817 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 NEMP1O14524 444 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 MSH4O15457 936 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 ACSL3O95573 720 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 EPHX2P34913 555 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 PRKCIP41743 596 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 DRG2P55039 364 aaKnown RBP4.48□□□□□ -1.69
VPS13C-202ENST00000261517 GFPT1Q06210 699 aaPredicted RBP4.48□□□□□ -1.69
VPS13C-202ENST00000261517 PDIA2Q13087 525 aaKnown RBP4.48□□□□□ -1.69
VPS13C-202ENST00000261517 MAPK7Q13164 816 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 OOSP2Q86WS3 158 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 ZNF398Q8TD17 642 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms