RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 CDH23Q9H251 3354 aa18.63■□□□□ 0.57
SSB-201ENST00000260956 SHBGP04278 402 aa18.63■□□□□ 0.57
SSB-201ENST00000260956 CSF2RAP15509 400 aa18.63■□□□□ 0.57
SSB-201ENST00000260956 GRM5P41594 1212 aa18.63■□□□□ 0.57
SSB-201ENST00000260956 ADCY2Q08462 1091 aa18.63■□□□□ 0.57
SSB-201ENST00000260956 PTK7Q13308 1070 aa18.63■□□□□ 0.57
SSB-201ENST00000260956 CCNG2Q16589 344 aa18.63■□□□□ 0.57
SSB-201ENST00000260956 TXNRD3NBQ6F5E7 133 aa18.63■□□□□ 0.57
SSB-201ENST00000260956 C16orf59Q7L2K0 433 aa18.63■□□□□ 0.57
SSB-201ENST00000260956 ARFGAP1Q8N6T3 406 aa18.63■□□□□ 0.57
SSB-201ENST00000260956 FAM124BQ9H5Z6 455 aaPredicted RBP18.63■□□□□ 0.57
SSB-201ENST00000260956 CALCOCO1Q9P1Z2 691 aa18.63■□□□□ 0.57
SSB-201ENST00000260956 NXF1Q9UBU9 619 aaKnown RBP18.63■□□□□ 0.57
SSB-201ENST00000260956 PRKAG2Q9UGJ0 569 aa18.63■□□□□ 0.57
SSB-201ENST00000260956 TRIOBPQ9H2D6 2365 aa18.63■□□□□ 0.57
SSB-201ENST00000260956 C3orf70A6NLC5 250 aaPredicted RBP18.62■□□□□ 0.57
SSB-201ENST00000260956 F8VP50 259 aa18.62■□□□□ 0.57
SSB-201ENST00000260956 CKBP12277 381 aa18.62■□□□□ 0.57
SSB-201ENST00000260956 HOXA11P31270 313 aaPredicted RBP18.62■□□□□ 0.57
SSB-201ENST00000260956 GNGT1P63211 74 aa18.62■□□□□ 0.57
SSB-201ENST00000260956 PDCLQ13371 301 aa18.62■□□□□ 0.57
SSB-201ENST00000260956 MBTPS1Q14703 1052 aa18.62■□□□□ 0.57
SSB-201ENST00000260956 TAZQ16635 292 aa18.62■□□□□ 0.57
SSB-201ENST00000260956 ATP13A4Q4VNC1 1196 aa18.62■□□□□ 0.57
SSB-201ENST00000260956 TNFAIP8L3Q5GJ75 292 aa18.62■□□□□ 0.57
SSB-201ENST00000260956 CYP4A22Q5TCH4 519 aa18.62■□□□□ 0.57
SSB-201ENST00000260956 PRPF38BQ5VTL8 546 aaKnown RBP18.62■□□□□ 0.57
SSB-201ENST00000260956 NT5DC4Q86YG4 428 aa18.62■□□□□ 0.57
SSB-201ENST00000260956 FNIP1Q8TF40 1166 aa18.62■□□□□ 0.57
SSB-201ENST00000260956 SEMA4AQ9H3S1 761 aa18.62■□□□□ 0.57
SSB-201ENST00000260956 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.62■□□□□ 0.57
SSB-201ENST00000260956 SCN1AP35498 2009 aa18.62■□□□□ 0.57
SSB-201ENST00000260956 SIGLEC16A6NMB1 481 aa18.61■□□□□ 0.57
SSB-201ENST00000260956 SRRM3A6NNA2 597 aaPredicted RBP18.61■□□□□ 0.57
SSB-201ENST00000260956 A6NNZ2 444 aa18.61■□□□□ 0.57
SSB-201ENST00000260956 IVLP07476 585 aa18.61■□□□□ 0.57
SSB-201ENST00000260956 RARGP13631 454 aa18.61■□□□□ 0.57
SSB-201ENST00000260956 CYP3A5P20815 502 aa18.61■□□□□ 0.57
SSB-201ENST00000260956 TMOD1P28289 359 aa18.61■□□□□ 0.57
SSB-201ENST00000260956 POLR2BP30876 1174 aaKnown RBP18.61■□□□□ 0.57
SSB-201ENST00000260956 GABRB2P47870 512 aa18.61■□□□□ 0.57
SSB-201ENST00000260956 SLC25A11Q02978 314 aaKnown RBP18.61■□□□□ 0.57
SSB-201ENST00000260956 NFX1Q12986 1120 aaKnown RBP18.61■□□□□ 0.57
SSB-201ENST00000260956 SNX1Q13596 522 aa18.61■□□□□ 0.57
SSB-201ENST00000260956 TMEM132DQ14C87 1099 aa18.61■□□□□ 0.57
SSB-201ENST00000260956 TMEM132AQ24JP5 1023 aa18.61■□□□□ 0.57
SSB-201ENST00000260956 WDR72Q3MJ13 1102 aa18.61■□□□□ 0.57
SSB-201ENST00000260956 TUBB8Q3ZCM7 444 aa18.61■□□□□ 0.57
SSB-201ENST00000260956 DNAJC21Q5F1R6 531 aaKnown RBP18.61■□□□□ 0.57
SSB-201ENST00000260956 ZNF618Q5T7W0 954 aa18.61■□□□□ 0.57
SSB-201ENST00000260956 MFSD5Q6N075 450 aa18.61■□□□□ 0.57
SSB-201ENST00000260956 DRICH1Q6PGQ1 229 aaPredicted RBP18.61■□□□□ 0.57
SSB-201ENST00000260956 CHRDL2Q6WN34 429 aa18.61■□□□□ 0.57
SSB-201ENST00000260956 ERICH1Q86X53 443 aa18.61■□□□□ 0.57
SSB-201ENST00000260956 XYLT1Q86Y38 959 aa18.61■□□□□ 0.57
SSB-201ENST00000260956 CPXM1Q96SM3 734 aa18.61■□□□□ 0.57
SSB-201ENST00000260956 CXCL16Q9H2A7 254 aa18.61■□□□□ 0.57
SSB-201ENST00000260956 ITGA11Q9UKX5 1188 aa18.61■□□□□ 0.57
SSB-201ENST00000260956 STRIP2Q9ULQ0 834 aa18.61■□□□□ 0.57
SSB-201ENST00000260956 GPR32O75388 356 aa18.6■□□□□ 0.57
SSB-201ENST00000260956 KLRC2P26717 231 aa18.6■□□□□ 0.57
SSB-201ENST00000260956 ATP1A2P50993 1020 aa18.6■□□□□ 0.57
SSB-201ENST00000260956 PIGHQ14442 188 aaPredicted RBP18.6■□□□□ 0.57
SSB-201ENST00000260956 MFSD7Q6UXD7 560 aa18.6■□□□□ 0.57
SSB-201ENST00000260956 POLNQ7Z5Q5 900 aa18.6■□□□□ 0.57
SSB-201ENST00000260956 RCOR2Q8IZ40 523 aa18.6■□□□□ 0.57
SSB-201ENST00000260956 JOSD2Q8TAC2 188 aa18.6■□□□□ 0.57
SSB-201ENST00000260956 RBM41Q96IZ5 413 aaKnown RBP18.6■□□□□ 0.57
SSB-201ENST00000260956 HEMGNQ9BXL5 484 aa18.6■□□□□ 0.57
SSB-201ENST00000260956 HOMER3Q9NSC5 361 aa18.6■□□□□ 0.57
SSB-201ENST00000260956 MTRF1LQ9UGC7 380 aaKnown RBP18.6■□□□□ 0.57
SSB-201ENST00000260956 USTQ9Y2C2 406 aa18.6■□□□□ 0.57
SSB-201ENST00000260956 hCG_1818297A0A087WSY0 165 aa18.6■□□□□ 0.57
SSB-201ENST00000260956 PITPNM1O00562 1244 aa18.6■□□□□ 0.57
SSB-201ENST00000260956 RIPK2O43353 540 aa18.6■□□□□ 0.57
SSB-201ENST00000260956 ERBB2P04626 1255 aa18.6■□□□□ 0.57
SSB-201ENST00000260956 KRT19P08727 400 aa18.6■□□□□ 0.57
SSB-201ENST00000260956 GNAT1P11488 350 aa18.6■□□□□ 0.57
SSB-201ENST00000260956 THPOP40225 353 aa18.6■□□□□ 0.57
SSB-201ENST00000260956 COPS2P61201 443 aa18.6■□□□□ 0.57
SSB-201ENST00000260956 SPOCD1Q6ZMY3 1216 aa18.6■□□□□ 0.57
SSB-201ENST00000260956 ATL2Q8NHH9 583 aa18.6■□□□□ 0.57
SSB-201ENST00000260956 GRK7Q8WTQ7 553 aa18.6■□□□□ 0.57
SSB-201ENST00000260956 DNAJB3Q8WWF6 145 aa18.6■□□□□ 0.57
SSB-201ENST00000260956 MCRS1Q96EZ8 462 aa18.6■□□□□ 0.57
SSB-201ENST00000260956 PGM2Q96G03 612 aa18.6■□□□□ 0.57
SSB-201ENST00000260956 SNF8Q96H20 258 aa18.6■□□□□ 0.57
SSB-201ENST00000260956 KLHL11Q9NVR0 708 aa18.6■□□□□ 0.57
SSB-201ENST00000260956 COLQQ9Y215 455 aaPredicted RBP18.6■□□□□ 0.57
SSB-201ENST00000260956 RRN3P2A6NIE6 340 aa18.59■□□□□ 0.57
SSB-201ENST00000260956 MED7O43513 233 aa18.59■□□□□ 0.57
SSB-201ENST00000260956 MICAL2O94851 1124 aa18.59■□□□□ 0.57
SSB-201ENST00000260956 ERLIN2O94905 339 aa18.59■□□□□ 0.57
SSB-201ENST00000260956 ITIH2P19823 946 aa18.59■□□□□ 0.57
SSB-201ENST00000260956 RFC1P35251 1148 aaPredicted RBP18.59■□□□□ 0.57
SSB-201ENST00000260956 MDH1P40925 334 aaKnown RBP18.59■□□□□ 0.57
SSB-201ENST00000260956 CDKN2BP42772 138 aa18.59■□□□□ 0.57
SSB-201ENST00000260956 ORC1Q13415 861 aa18.59■□□□□ 0.57
SSB-201ENST00000260956 SLMAPQ14BN4 828 aa18.59■□□□□ 0.57
SSB-201ENST00000260956 PPP1R7Q15435 360 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms