RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 F8W810 466 aa19.91■□□□□ 0.78
TRIM47-201ENST00000254816 RNF40O75150 1001 aa19.91■□□□□ 0.78
TRIM47-201ENST00000254816 TKTP29401 623 aaKnown RBP19.91■□□□□ 0.78
TRIM47-201ENST00000254816 RPL9P32969 192 aaKnown RBP19.91■□□□□ 0.78
TRIM47-201ENST00000254816 BRCC3P46736 316 aa19.91■□□□□ 0.78
TRIM47-201ENST00000254816 AARSP49588 968 aaKnown RBP eCLIP19.91■□□□□ 0.78
TRIM47-201ENST00000254816 BFSP2Q13515 415 aa19.91■□□□□ 0.78
TRIM47-201ENST00000254816 TIGD5Q53EQ6 642 aa19.91■□□□□ 0.78
TRIM47-201ENST00000254816 FAM102AQ5T9C2 384 aaPredicted RBP19.91■□□□□ 0.78
TRIM47-201ENST00000254816 KIAA0319Q5VV43 1072 aa19.91■□□□□ 0.78
TRIM47-201ENST00000254816 OR6B2Q6IFH4 312 aa19.91■□□□□ 0.78
TRIM47-201ENST00000254816 B3GALNT2Q8NCR0 500 aa19.91■□□□□ 0.78
TRIM47-201ENST00000254816 DDX27Q96GQ7 796 aaKnown RBP19.91■□□□□ 0.78
TRIM47-201ENST00000254816 MED4Q9NPJ6 270 aa19.91■□□□□ 0.78
TRIM47-201ENST00000254816 KLHL11Q9NVR0 708 aa19.91■□□□□ 0.78
TRIM47-201ENST00000254816 DDX43Q9NXZ2 648 aaKnown RBP19.91■□□□□ 0.78
TRIM47-201ENST00000254816 ZSCAN5CA6NGD5 496 aaPredicted RBP19.91■□□□□ 0.78
TRIM47-201ENST00000254816 RAD51CO43502 376 aa19.91■□□□□ 0.78
TRIM47-201ENST00000254816 GABBR2O75899 941 aa19.91■□□□□ 0.78
TRIM47-201ENST00000254816 B3GAT3O94766 335 aa19.91■□□□□ 0.78
TRIM47-201ENST00000254816 TAP1Q03518 808 aa19.91■□□□□ 0.78
TRIM47-201ENST00000254816 ATP13A4Q4VNC1 1196 aa19.91■□□□□ 0.78
TRIM47-201ENST00000254816 CLLU1OSQ5K130 101 aa19.91■□□□□ 0.78
TRIM47-201ENST00000254816 ZDHHC14Q8IZN3 488 aa19.91■□□□□ 0.78
TRIM47-201ENST00000254816 DBF4BQ8NFT6 615 aa19.91■□□□□ 0.78
TRIM47-201ENST00000254816 SLC35F5Q8WV83 523 aa19.91■□□□□ 0.78
TRIM47-201ENST00000254816 MCRS1Q96EZ8 462 aa19.91■□□□□ 0.78
TRIM47-201ENST00000254816 WDR35Q9P2L0 1181 aa19.91■□□□□ 0.78
TRIM47-201ENST00000254816 CLDN5O00501 218 aa19.9■□□□□ 0.78
TRIM47-201ENST00000254816 GABRDO14764 452 aa19.9■□□□□ 0.78
TRIM47-201ENST00000254816 B4GALT3O60512 393 aa19.9■□□□□ 0.78
TRIM47-201ENST00000254816 GRAP2O75791 330 aa19.9■□□□□ 0.78
TRIM47-201ENST00000254816 PSMA2P25787 234 aa19.9■□□□□ 0.78
TRIM47-201ENST00000254816 MAN1A1P33908 653 aa19.9■□□□□ 0.78
TRIM47-201ENST00000254816 GGCXP38435 758 aa19.9■□□□□ 0.78
TRIM47-201ENST00000254816 GSCP56915 257 aaPredicted RBP19.9■□□□□ 0.78
TRIM47-201ENST00000254816 TUSC3Q13454 348 aa19.9■□□□□ 0.78
TRIM47-201ENST00000254816 RHOT1Q8IXI2 618 aa19.9■□□□□ 0.78
TRIM47-201ENST00000254816 TNIP3Q96KP6 325 aa19.9■□□□□ 0.78
TRIM47-201ENST00000254816 ITGB1P05556 798 aa19.9■□□□□ 0.78
TRIM47-201ENST00000254816 GLI1P08151 1106 aa19.9■□□□□ 0.78
TRIM47-201ENST00000254816 TCTN1Q2MV58 587 aa19.9■□□□□ 0.78
TRIM47-201ENST00000254816 CD300LGQ6UXG3 332 aa19.9■□□□□ 0.78
TRIM47-201ENST00000254816 SCLYQ96I15 445 aa19.9■□□□□ 0.78
TRIM47-201ENST00000254816 B3GNT5Q9BYG0 378 aa19.9■□□□□ 0.78
TRIM47-201ENST00000254816 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.9■□□□□ 0.78
TRIM47-201ENST00000254816 TANC1Q9C0D5 1861 aa19.89■□□□□ 0.78
TRIM47-201ENST00000254816 ESYT3A0FGR9 886 aa19.89■□□□□ 0.77
TRIM47-201ENST00000254816 CCDC188H7C350 402 aa19.89■□□□□ 0.77
TRIM47-201ENST00000254816 SART1O43290 800 aaKnown RBP19.89■□□□□ 0.77
TRIM47-201ENST00000254816 HSPA6P17066 643 aa19.89■□□□□ 0.77
TRIM47-201ENST00000254816 PTPN1P18031 435 aaKnown RBP19.89■□□□□ 0.77
TRIM47-201ENST00000254816 MNX1P50219 401 aaPredicted RBP19.89■□□□□ 0.77
TRIM47-201ENST00000254816 TXNRD3NBQ6F5E7 133 aa19.89■□□□□ 0.77
TRIM47-201ENST00000254816 ZNF280BQ86YH2 543 aa19.89■□□□□ 0.77
TRIM47-201ENST00000254816 SCUBE3Q8IX30 993 aa19.89■□□□□ 0.77
TRIM47-201ENST00000254816 ANKRD52Q8NB46 1076 aa19.89■□□□□ 0.77
TRIM47-201ENST00000254816 SLC4A5Q9BY07 1137 aa19.89■□□□□ 0.77
TRIM47-201ENST00000254816 MIS12Q9H081 205 aa19.89■□□□□ 0.77
TRIM47-201ENST00000254816 FAM204AQ9H8W3 233 aa19.89■□□□□ 0.77
TRIM47-201ENST00000254816 AGPSO00116 658 aa19.88■□□□□ 0.77
TRIM47-201ENST00000254816 PSTPIP1O43586 416 aa19.88■□□□□ 0.77
TRIM47-201ENST00000254816 DDHD2O94830 711 aa19.88■□□□□ 0.77
TRIM47-201ENST00000254816 HEXIM1O94992 359 aaKnown RBP19.88■□□□□ 0.77
TRIM47-201ENST00000254816 EOMESO95936 686 aa19.88■□□□□ 0.77
TRIM47-201ENST00000254816 FAM189BP81408 668 aa19.88■□□□□ 0.77
TRIM47-201ENST00000254816 BST2Q10589 180 aaKnown RBP19.88■□□□□ 0.77
TRIM47-201ENST00000254816 PIGHQ14442 188 aaPredicted RBP19.88■□□□□ 0.77
TRIM47-201ENST00000254816 TAF5Q15542 800 aa19.88■□□□□ 0.77
TRIM47-201ENST00000254816 MDH1BQ5I0G3 518 aa19.88■□□□□ 0.77
TRIM47-201ENST00000254816 GLB1LQ6UWU2 654 aa19.88■□□□□ 0.77
TRIM47-201ENST00000254816 SLC13A5Q86YT5 568 aaPredicted RBP19.88■□□□□ 0.77
TRIM47-201ENST00000254816 ACSF2Q96CM8 615 aaPredicted RBP19.88■□□□□ 0.77
TRIM47-201ENST00000254816 NAP1L3Q99457 506 aaPredicted RBP19.88■□□□□ 0.77
TRIM47-201ENST00000254816 HERPUD2Q9BSE4 406 aa19.88■□□□□ 0.77
TRIM47-201ENST00000254816 AMACRQ9UHK6 382 aa19.88■□□□□ 0.77
TRIM47-201ENST00000254816 BCAT1P54687 386 aa19.88■□□□□ 0.77
TRIM47-201ENST00000254816 CCL23P55773 120 aa19.88■□□□□ 0.77
TRIM47-201ENST00000254816 GLE1Q53GS7 698 aaKnown RBP19.88■□□□□ 0.77
TRIM47-201ENST00000254816 TRNP1Q6NT89 227 aa19.88■□□□□ 0.77
TRIM47-201ENST00000254816 SLC39A5Q6ZMH5 540 aa19.88■□□□□ 0.77
TRIM47-201ENST00000254816 CCDC50Q8IVM0 306 aa19.88■□□□□ 0.77
TRIM47-201ENST00000254816 FUKQ8N0W3 1084 aa19.88■□□□□ 0.77
TRIM47-201ENST00000254816 ARFGAP1Q8N6T3 406 aa19.88■□□□□ 0.77
TRIM47-201ENST00000254816 CLEC4CQ8WTT0 213 aa19.88■□□□□ 0.77
TRIM47-201ENST00000254816 SEZ6LQ9BYH1 1024 aa19.88■□□□□ 0.77
TRIM47-201ENST00000254816 PPP1R12CQ9BZL4 782 aa19.88■□□□□ 0.77
TRIM47-201ENST00000254816 CRTAC1Q9NQ79 661 aa19.88■□□□□ 0.77
TRIM47-201ENST00000254816 SETSIPP0DME0 302 aa19.87■□□□□ 0.77
TRIM47-201ENST00000254816 PLEKHG4Q58EX7 1191 aa19.87■□□□□ 0.77
TRIM47-201ENST00000254816 PAQR9Q6ZVX9 377 aa19.87■□□□□ 0.77
TRIM47-201ENST00000254816 ANKS1BQ7Z6G8 1248 aa19.87■□□□□ 0.77
TRIM47-201ENST00000254816 DIS3LQ8TF46 1054 aaKnown RBP19.87■□□□□ 0.77
TRIM47-201ENST00000254816 RUBCNQ92622 972 aa19.87■□□□□ 0.77
TRIM47-201ENST00000254816 FTHL17Q9BXU8 183 aa19.87■□□□□ 0.77
TRIM47-201ENST00000254816 GOLGA6BA6NDN3 693 aa19.87■□□□□ 0.77
TRIM47-201ENST00000254816 PI4K2BG5E9Z4 385 aa19.87■□□□□ 0.77
TRIM47-201ENST00000254816 ENPP3O14638 875 aa19.87■□□□□ 0.77
TRIM47-201ENST00000254816 PAPSS1O43252 624 aaPredicted RBP19.87■□□□□ 0.77
TRIM47-201ENST00000254816 BEST1O76090 585 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms