RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 ZNF662Q6ZS27 426 aa15.64■□□□□ 0.09
UBE4B-201ENST00000253251 PDCD7Q8N8D1 485 aaKnown RBP15.64■□□□□ 0.09
UBE4B-201ENST00000253251 TGS1Q96RS0 853 aaKnown RBP15.64■□□□□ 0.09
UBE4B-201ENST00000253251 BRD8Q9H0E9 1235 aa15.64■□□□□ 0.09
UBE4B-201ENST00000253251 ST6GALNAC4Q9H4F1 302 aa15.64■□□□□ 0.09
UBE4B-201ENST00000253251 KRT82Q9NSB4 513 aa15.64■□□□□ 0.09
UBE4B-201ENST00000253251 C2CD2Q9Y426 696 aa15.64■□□□□ 0.09
UBE4B-201ENST00000253251 SCN11AQ9UI33 1791 aa15.64■□□□□ 0.09
UBE4B-201ENST00000253251 ASTN2O75129 1339 aaPredicted RBP15.63■□□□□ 0.09
UBE4B-201ENST00000253251 TMEM150BA6NC51 233 aa15.63■□□□□ 0.09
UBE4B-201ENST00000253251 NDST1P52848 882 aa15.63■□□□□ 0.09
UBE4B-201ENST00000253251 ITGB3BPQ13352 177 aaPredicted RBP15.63■□□□□ 0.09
UBE4B-201ENST00000253251 DUSP28Q4G0W2 176 aa15.63■□□□□ 0.09
UBE4B-201ENST00000253251 OVOS1Q6IE37 1185 aa15.63■□□□□ 0.09
UBE4B-201ENST00000253251 SPOCD1Q6ZMY3 1216 aa15.63■□□□□ 0.09
UBE4B-201ENST00000253251 FZD1Q9UP38 647 aa15.63■□□□□ 0.09
UBE4B-201ENST00000253251 FZD9O00144 591 aa15.63■□□□□ 0.09
UBE4B-201ENST00000253251 KIF3CO14782 793 aa15.63■□□□□ 0.09
UBE4B-201ENST00000253251 NCF2P19878 526 aaPredicted RBP15.63■□□□□ 0.09
UBE4B-201ENST00000253251 SP3Q02447 781 aa15.63■□□□□ 0.09
UBE4B-201ENST00000253251 PTGISQ16647 500 aa15.63■□□□□ 0.09
UBE4B-201ENST00000253251 SMTNL2Q2TAL5 461 aa15.63■□□□□ 0.09
UBE4B-201ENST00000253251 DCLK2Q8N568 766 aa15.63■□□□□ 0.09
UBE4B-201ENST00000253251 PABPC5Q96DU9 382 aaKnown RBP15.63■□□□□ 0.09
UBE4B-201ENST00000253251 VPS9D1Q9Y2B5 631 aa15.63■□□□□ 0.09
UBE4B-201ENST00000253251 KCTD10Q9H3F6 313 aa15.63■□□□□ 0.09
UBE4B-201ENST00000253251 OLA1Q9NTK5 396 aaKnown RBP15.63■□□□□ 0.09
UBE4B-201ENST00000253251 DDX43Q9NXZ2 648 aaKnown RBP15.63■□□□□ 0.09
UBE4B-201ENST00000253251 TRPM5Q9NZQ8 1165 aa15.63■□□□□ 0.09
UBE4B-201ENST00000253251 USP18Q9UMW8 372 aa15.63■□□□□ 0.09
UBE4B-201ENST00000253251 SPECC1L-ADORA2AF8WAN1 911 aa15.63■□□□□ 0.09
UBE4B-201ENST00000253251 CCDC22O60826 627 aa15.63■□□□□ 0.09
UBE4B-201ENST00000253251 ATP9AO75110 1047 aa15.63■□□□□ 0.09
UBE4B-201ENST00000253251 FARP2O94887 1054 aaPredicted RBP15.63■□□□□ 0.09
UBE4B-201ENST00000253251 CARSP49589 748 aaKnown RBP15.63■□□□□ 0.09
UBE4B-201ENST00000253251 ZNF384Q8TF68 577 aa15.63■□□□□ 0.09
UBE4B-201ENST00000253251 RXFP2Q8WXD0 754 aa15.63■□□□□ 0.09
UBE4B-201ENST00000253251 CLMNQ96JQ2 1002 aa15.63■□□□□ 0.09
UBE4B-201ENST00000253251 ELOVL4Q9GZR5 314 aa15.63■□□□□ 0.09
UBE4B-201ENST00000253251 TSPAN16Q9UKR8 245 aa15.63■□□□□ 0.09
UBE4B-201ENST00000253251 DDX3XO00571 662 aaKnown RBP eCLIP15.62■□□□□ 0.095e-17■■□□□ 13.6
UBE4B-201ENST00000253251 SNRPAP09012 282 aaKnown RBP15.62■□□□□ 0.09
UBE4B-201ENST00000253251 TGM2P21980 687 aa15.62■□□□□ 0.09
UBE4B-201ENST00000253251 YWHAHQ04917 246 aaPredicted RBP15.62■□□□□ 0.09
UBE4B-201ENST00000253251 DMTNQ08495 405 aa15.62■□□□□ 0.09
UBE4B-201ENST00000253251 CAPSQ13938 189 aa15.62■□□□□ 0.09
UBE4B-201ENST00000253251 ANKMY2Q8IV38 441 aa15.62■□□□□ 0.09
UBE4B-201ENST00000253251 HOMEZQ8IX15 550 aa15.62■□□□□ 0.09
UBE4B-201ENST00000253251 MRPS31Q92665 395 aaKnown RBP15.62■□□□□ 0.09
UBE4B-201ENST00000253251 SERPINB12Q96P63 405 aa15.62■□□□□ 0.09
UBE4B-201ENST00000253251 ACO2Q99798 780 aaKnown RBP15.62■□□□□ 0.09
UBE4B-201ENST00000253251 EML4Q9HC35 981 aaKnown RBP15.62■□□□□ 0.09
UBE4B-201ENST00000253251 PPARGC1AQ9UBK2 798 aaKnown RBP15.62■□□□□ 0.09
UBE4B-201ENST00000253251 AAR2Q9Y312 384 aaKnown RBP15.62■□□□□ 0.09
UBE4B-201ENST00000253251 PCDHB5Q9Y5E4 795 aa15.62■□□□□ 0.09
UBE4B-201ENST00000253251 YY1P25490 414 aa15.62■□□□□ 0.09
UBE4B-201ENST00000253251 OCRLQ01968 901 aa15.62■□□□□ 0.09
UBE4B-201ENST00000253251 NAA25Q14CX7 972 aa15.62■□□□□ 0.09
UBE4B-201ENST00000253251 TREML2Q5T2D2 321 aa15.62■□□□□ 0.09
UBE4B-201ENST00000253251 NLRP14Q86W24 1093 aa15.62■□□□□ 0.09
UBE4B-201ENST00000253251 SMARCD1Q96GM5 515 aa15.62■□□□□ 0.09
UBE4B-201ENST00000253251 MUC3BQ9H195 1237 aa15.62■□□□□ 0.09
UBE4B-201ENST00000253251 NDE1Q9NXR1 346 aa15.62■□□□□ 0.09
UBE4B-201ENST00000253251 BTNL10A8MVZ5 291 aa15.62■□□□□ 0.09
UBE4B-201ENST00000253251 CLGNO14967 610 aa15.62■□□□□ 0.09
UBE4B-201ENST00000253251 SMIM10L2AP0DMW4 78 aa15.62■□□□□ 0.09
UBE4B-201ENST00000253251 SMIM10L2BP0DMW5 78 aa15.62■□□□□ 0.09
UBE4B-201ENST00000253251 BMP6P22004 513 aa15.62■□□□□ 0.09
UBE4B-201ENST00000253251 HNRNPH3P31942 346 aaKnown RBP15.62■□□□□ 0.09
UBE4B-201ENST00000253251 CASP5P51878 434 aa15.62■□□□□ 0.09
UBE4B-201ENST00000253251 ENPEPQ07075 957 aa15.62■□□□□ 0.09
UBE4B-201ENST00000253251 KRT33BQ14525 404 aa15.62■□□□□ 0.09
UBE4B-201ENST00000253251 E2F5Q15329 346 aa15.62■□□□□ 0.09
UBE4B-201ENST00000253251 DEFB115Q30KQ5 88 aa15.62■□□□□ 0.09
UBE4B-201ENST00000253251 CBWD6Q4V339 395 aa15.62■□□□□ 0.09
UBE4B-201ENST00000253251 CBWD3Q5JTY5 395 aa15.62■□□□□ 0.09
UBE4B-201ENST00000253251 CBWD5Q5RIA9 395 aa15.62■□□□□ 0.09
UBE4B-201ENST00000253251 A0A0G2JND7 137 aa15.62■□□□□ 0.09
UBE4B-201ENST00000253251 TXNDC9O14530 226 aa15.62■□□□□ 0.09
UBE4B-201ENST00000253251 PPP1R37O75864 691 aa15.62■□□□□ 0.09
UBE4B-201ENST00000253251 BAG2O95816 211 aa15.62■□□□□ 0.09
UBE4B-201ENST00000253251 HMBSP08397 361 aa15.62■□□□□ 0.09
UBE4B-201ENST00000253251 ARFIP2P53365 341 aa15.62■□□□□ 0.09
UBE4B-201ENST00000253251 MORF4L2Q15014 288 aa15.62■□□□□ 0.09
UBE4B-201ENST00000253251 TAS2R42Q7RTR8 314 aa15.62■□□□□ 0.09
UBE4B-201ENST00000253251 C9orf72Q96LT7 481 aa15.62■□□□□ 0.09
UBE4B-201ENST00000253251 AP4E1Q9UPM8 1137 aa15.62■□□□□ 0.09
UBE4B-201ENST00000253251 DERAQ9Y315 318 aa15.62■□□□□ 0.09
UBE4B-201ENST00000253251 EIF3HO15372 352 aaKnown RBP eCLIP15.61■□□□□ 0.098e-6■■□□□ 11.4
UBE4B-201ENST00000253251 HNRNPCL1O60812 293 aaKnown RBP15.61■□□□□ 0.09
UBE4B-201ENST00000253251 RAP1GAPP47736 663 aa15.61■□□□□ 0.09
UBE4B-201ENST00000253251 KCNJ1P48048 391 aa15.61■□□□□ 0.09
UBE4B-201ENST00000253251 MRPS6P82932 125 aaKnown RBP15.61■□□□□ 0.09
UBE4B-201ENST00000253251 PTK6Q13882 451 aa15.61■□□□□ 0.09
UBE4B-201ENST00000253251 AMHR2Q16671 573 aa15.61■□□□□ 0.09
UBE4B-201ENST00000253251 MDH1BQ5I0G3 518 aa15.61■□□□□ 0.09
UBE4B-201ENST00000253251 TRIM15Q9C019 465 aa15.61■□□□□ 0.09
UBE4B-201ENST00000253251 PABPC3Q9H361 631 aaKnown RBP15.61■□□□□ 0.09
UBE4B-201ENST00000253251 DUSP10Q9Y6W6 482 aa15.61■□□□□ 0.09
UBE4B-201ENST00000253251 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms