RNA–Protein interactions for RNA: ENST00000249440.4

HOXD3-201, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD3, Length 2,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-201ENST00000249440 A0A1W2PPM1 405 aa17.22■□□□□ 0.35
HOXD3-201ENST00000249440 HGSO14964 777 aaPredicted RBP17.22■□□□□ 0.35
HOXD3-201ENST00000249440 ATP5HO75947 161 aa17.22■□□□□ 0.35
HOXD3-201ENST00000249440 KRT16P08779 473 aa17.22■□□□□ 0.35
HOXD3-201ENST00000249440 KRT4P19013 534 aa17.22■□□□□ 0.35
HOXD3-201ENST00000249440 ALDH3A1P30838 453 aa17.22■□□□□ 0.35
HOXD3-201ENST00000249440 KLHL38Q2WGJ6 581 aa17.22■□□□□ 0.35
HOXD3-201ENST00000249440 C3orf62Q6ZUJ4 267 aa17.22■□□□□ 0.35
HOXD3-201ENST00000249440 PLPPR4Q7Z2D5 763 aa17.22■□□□□ 0.35
HOXD3-201ENST00000249440 KIAA0319LQ8IZA0 1049 aa17.22■□□□□ 0.35
HOXD3-201ENST00000249440 KIF2BQ8N4N8 673 aa17.22■□□□□ 0.35
HOXD3-201ENST00000249440 KCTD6Q8NC69 237 aa17.22■□□□□ 0.35
HOXD3-201ENST00000249440 FAXDC2Q96IV6 333 aa17.22■□□□□ 0.35
HOXD3-201ENST00000249440 MPHOSPH6Q99547 160 aaKnown RBP17.22■□□□□ 0.35
HOXD3-201ENST00000249440 GPR20Q99678 358 aa17.22■□□□□ 0.35
HOXD3-201ENST00000249440 SPATC1LQ9H0A9 340 aa17.22■□□□□ 0.35
HOXD3-201ENST00000249440 FZD8Q9H461 694 aa17.22■□□□□ 0.35
HOXD3-201ENST00000249440 TXLNGQ9NUQ3 528 aa17.22■□□□□ 0.35
HOXD3-201ENST00000249440 TJP2Q9UDY2 1190 aa17.22■□□□□ 0.35
HOXD3-201ENST00000249440 ZBTB42B2RXF5 422 aa17.21■□□□□ 0.35
HOXD3-201ENST00000249440 INO80B-WBP1J3KQ70 363 aa17.21■□□□□ 0.35
HOXD3-201ENST00000249440 EDF1O60869 148 aaKnown RBP17.21■□□□□ 0.35
HOXD3-201ENST00000249440 BANF1O75531 89 aa17.21■□□□□ 0.35
HOXD3-201ENST00000249440 RNF8O76064 485 aa17.21■□□□□ 0.35
HOXD3-201ENST00000249440 ZWINTO95229 277 aa17.21■□□□□ 0.35
HOXD3-201ENST00000249440 IL18RAPO95256 599 aa17.21■□□□□ 0.35
HOXD3-201ENST00000249440 SSTR1P30872 391 aa17.21■□□□□ 0.35
HOXD3-201ENST00000249440 MSH2P43246 934 aa17.21■□□□□ 0.35
HOXD3-201ENST00000249440 MOGSQ13724 837 aa17.21■□□□□ 0.35
HOXD3-201ENST00000249440 ACAP1Q15027 740 aa17.21■□□□□ 0.35
HOXD3-201ENST00000249440 HSDL1Q3SXM5 330 aa17.21■□□□□ 0.35
HOXD3-201ENST00000249440 XYLT1Q86Y38 959 aa17.21■□□□□ 0.35
HOXD3-201ENST00000249440 LRRC37BQ96QE4 947 aa17.21■□□□□ 0.35
HOXD3-201ENST00000249440 CPXM1Q96SM3 734 aa17.21■□□□□ 0.35
HOXD3-201ENST00000249440 MAK16Q9BXY0 300 aaKnown RBP17.21■□□□□ 0.35
HOXD3-201ENST00000249440 BCO2Q9BYV7 579 aa17.21■□□□□ 0.35
HOXD3-201ENST00000249440 INO80BQ9C086 356 aaPredicted RBP17.21■□□□□ 0.35
HOXD3-201ENST00000249440 RPF1Q9H9Y2 349 aaKnown RBP17.21■□□□□ 0.35
HOXD3-201ENST00000249440 METTL5Q9NRN9 209 aaKnown RBP17.21■□□□□ 0.35
HOXD3-201ENST00000249440 GPRC5DQ9NZD1 345 aa17.21■□□□□ 0.35
HOXD3-201ENST00000249440 CLUHO75153 1309 aa17.21■□□□□ 0.35
HOXD3-201ENST00000249440 PTPRFP10586 1907 aa17.21■□□□□ 0.35
HOXD3-201ENST00000249440 APOC4-APOC2K7ER74 178 aa17.21■□□□□ 0.35
HOXD3-201ENST00000249440 LGR5O75473 907 aa17.21■□□□□ 0.35
HOXD3-201ENST00000249440 APOC2P02655 101 aa17.21■□□□□ 0.35
HOXD3-201ENST00000249440 RPL22P35268 128 aaKnown RBP17.21■□□□□ 0.35
HOXD3-201ENST00000249440 PSMC4P43686 418 aa17.21■□□□□ 0.35
HOXD3-201ENST00000249440 RAP1GAPP47736 663 aa17.21■□□□□ 0.35
HOXD3-201ENST00000249440 RAD23BP54727 409 aa17.21■□□□□ 0.35
HOXD3-201ENST00000249440 SLC1A5Q15758 541 aa17.21■□□□□ 0.35
HOXD3-201ENST00000249440 FNBP1LQ5T0N5 605 aa17.21■□□□□ 0.35
HOXD3-201ENST00000249440 ANKRD22Q5VYY1 191 aa17.21■□□□□ 0.35
HOXD3-201ENST00000249440 ADGRD1Q6QNK2 874 aa17.21■□□□□ 0.35
HOXD3-201ENST00000249440 TRIM50Q86XT4 487 aa17.21■□□□□ 0.35
HOXD3-201ENST00000249440 PALM2Q8IXS6 379 aa17.21■□□□□ 0.35
HOXD3-201ENST00000249440 PDIK1LQ8N165 341 aa17.21■□□□□ 0.35
HOXD3-201ENST00000249440 EMC1Q8N766 993 aa17.21■□□□□ 0.35
HOXD3-201ENST00000249440 CEP120Q8N960 986 aa17.21■□□□□ 0.35
HOXD3-201ENST00000249440 SPOCK2Q92563 424 aa17.21■□□□□ 0.35
HOXD3-201ENST00000249440 NLRP4Q96MN2 994 aa17.21■□□□□ 0.35
HOXD3-201ENST00000249440 SLCO1B3Q9NPD5 702 aa17.21■□□□□ 0.35
HOXD3-201ENST00000249440 GEMIN8Q9NWZ8 242 aaKnown RBP17.21■□□□□ 0.35
HOXD3-201ENST00000249440 GRID1Q9ULK0 1009 aa17.21■□□□□ 0.35
HOXD3-201ENST00000249440 ZMYND8Q9ULU4 1186 aaPredicted RBP17.21■□□□□ 0.35
HOXD3-201ENST00000249440 STK38LQ9Y2H1 464 aa17.21■□□□□ 0.35
HOXD3-201ENST00000249440 E7ESA3 106 aa17.2■□□□□ 0.34
HOXD3-201ENST00000249440 DCTN3O75935 186 aa17.2■□□□□ 0.34
HOXD3-201ENST00000249440 LVRNQ6Q4G3 990 aa17.2■□□□□ 0.34
HOXD3-201ENST00000249440 VSIG1Q86XK7 387 aa17.2■□□□□ 0.34
HOXD3-201ENST00000249440 GPC2Q8N158 579 aa17.2■□□□□ 0.34
HOXD3-201ENST00000249440 ANKLE1Q8NAG6 615 aa17.2■□□□□ 0.34
HOXD3-201ENST00000249440 FBXO36Q8NEA4 188 aa17.2■□□□□ 0.34
HOXD3-201ENST00000249440 RAB3IPQ96QF0 476 aaPredicted RBP17.2■□□□□ 0.34
HOXD3-201ENST00000249440 ACSS3Q9H6R3 686 aa17.2■□□□□ 0.34
HOXD3-201ENST00000249440 C10orf88Q9H8K7 445 aa17.2■□□□□ 0.34
HOXD3-201ENST00000249440 ETNK1Q9HBU6 452 aa17.2■□□□□ 0.34
HOXD3-201ENST00000249440 PCSK1NQ9UHG2 260 aa17.2■□□□□ 0.34
HOXD3-201ENST00000249440 A0A0G2JMZ2 1700 aa17.2■□□□□ 0.34
HOXD3-201ENST00000249440 USP2O75604 605 aaPredicted RBP17.2■□□□□ 0.34
HOXD3-201ENST00000249440 CD48P09326 243 aa17.2■□□□□ 0.34
HOXD3-201ENST00000249440 CXCL8P10145 99 aa17.2■□□□□ 0.34
HOXD3-201ENST00000249440 ATP2A2P16615 1042 aaKnown RBP17.2■□□□□ 0.34
HOXD3-201ENST00000249440 CDH8P55286 799 aa17.2■□□□□ 0.34
HOXD3-201ENST00000249440 GAD2Q05329 585 aa17.2■□□□□ 0.34
HOXD3-201ENST00000249440 SEPT7Q16181 437 aaKnown RBP17.2■□□□□ 0.34
HOXD3-201ENST00000249440 MSS51Q4VC12 460 aa17.2■□□□□ 0.34
HOXD3-201ENST00000249440 RFX6Q8HWS3 928 aa17.2■□□□□ 0.34
HOXD3-201ENST00000249440 CMASQ8NFW8 434 aaPredicted RBP17.2■□□□□ 0.34
HOXD3-201ENST00000249440 PAFAH2Q99487 392 aa17.2■□□□□ 0.34
HOXD3-201ENST00000249440 MYLK2Q9H1R3 596 aa17.2■□□□□ 0.34
HOXD3-201ENST00000249440 MCF2LO15068 1137 aa17.19■□□□□ 0.34
HOXD3-201ENST00000249440 B4GALT5O43286 388 aa17.19■□□□□ 0.34
HOXD3-201ENST00000249440 ARIH2O95376 493 aa17.19■□□□□ 0.34
HOXD3-201ENST00000249440 ERBB2P04626 1255 aa17.19■□□□□ 0.34
HOXD3-201ENST00000249440 TSHRP16473 764 aa17.19■□□□□ 0.34
HOXD3-201ENST00000249440 CCND1P24385 295 aa17.19■□□□□ 0.34
HOXD3-201ENST00000249440 MIPP30301 263 aa17.19■□□□□ 0.34
HOXD3-201ENST00000249440 EIF3EP60228 445 aaKnown RBP17.19■□□□□ 0.34
HOXD3-201ENST00000249440 VGLL4Q14135 290 aa17.19■□□□□ 0.34
HOXD3-201ENST00000249440 CELF3Q5SZQ8 465 aaKnown RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms