RNA–Protein interactions for RNA: ENST00000249007.4

RFPL3-201, Transcript of ret finger protein like 3, humanhuman

TSL 1 (best) BASIC

Gene RFPL3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-201ENST00000249007 SFTPA1Q8IWL2 248 aa12.93□□□□□ -0.34
RFPL3-201ENST00000249007 GALNT15Q8N3T1 639 aa12.93□□□□□ -0.34
RFPL3-201ENST00000249007 SPPL2BQ8TCT7 592 aa12.93□□□□□ -0.34
RFPL3-201ENST00000249007 SETD7Q8WTS6 366 aaKnown RBP12.93□□□□□ -0.34
RFPL3-201ENST00000249007 C2orf15Q8WU43 125 aaKnown RBP12.93□□□□□ -0.34
RFPL3-201ENST00000249007 SENP8Q96LD8 212 aa12.93□□□□□ -0.34
RFPL3-201ENST00000249007 HSPA12BQ96MM6 686 aa12.93□□□□□ -0.34
RFPL3-201ENST00000249007 KIF2CQ99661 725 aa12.93□□□□□ -0.34
RFPL3-201ENST00000249007 ZCWPW1Q9H0M4 648 aa12.93□□□□□ -0.34
RFPL3-201ENST00000249007 LINC00597Q9H2U6 94 aa12.93□□□□□ -0.34
RFPL3-201ENST00000249007 CLMPQ9H6B4 373 aa12.93□□□□□ -0.34
RFPL3-201ENST00000249007 TMEM206Q9H813 350 aa12.93□□□□□ -0.34
RFPL3-201ENST00000249007 GJB4Q9NTQ9 266 aa12.93□□□□□ -0.34
RFPL3-201ENST00000249007 ABI2Q9NYB9 513 aaPredicted RBP12.93□□□□□ -0.34
RFPL3-201ENST00000249007 UBQLN1Q9UMX0 589 aaKnown RBP12.93□□□□□ -0.34
RFPL3-201ENST00000249007 TRAV19A0A0A6YYK7 116 aa12.92□□□□□ -0.34
RFPL3-201ENST00000249007 CAPN8A6NHC0 703 aa12.92□□□□□ -0.34
RFPL3-201ENST00000249007 USP17L7P0C7H9 530 aa12.92□□□□□ -0.34
RFPL3-201ENST00000249007 HAPLN1P10915 354 aaPredicted RBP12.92□□□□□ -0.34
RFPL3-201ENST00000249007 NPTX2P47972 431 aa12.92□□□□□ -0.34
RFPL3-201ENST00000249007 PEX3P56589 373 aa12.92□□□□□ -0.34
RFPL3-201ENST00000249007 CAMK2BQ13554 666 aa12.92□□□□□ -0.34
RFPL3-201ENST00000249007 NOLC1Q14978 699 aaKnown RBP eCLIP12.92□□□□□ -0.34
RFPL3-201ENST00000249007 TAS1R3Q7RTX0 852 aa12.92□□□□□ -0.34
RFPL3-201ENST00000249007 SLC41A1Q8IVJ1 513 aa12.92□□□□□ -0.34
RFPL3-201ENST00000249007 PDCD7Q8N8D1 485 aaKnown RBP12.92□□□□□ -0.34
RFPL3-201ENST00000249007 TRIML1Q8N9V2 468 aa12.92□□□□□ -0.34
RFPL3-201ENST00000249007 STKLD1Q8NE28 680 aa12.92□□□□□ -0.34
RFPL3-201ENST00000249007 SH3RF2Q8TEC5 729 aa12.92□□□□□ -0.34
RFPL3-201ENST00000249007 FCRL3Q96P31 734 aaPredicted RBP12.92□□□□□ -0.34
RFPL3-201ENST00000249007 SLC22A12Q96S37 553 aa12.92□□□□□ -0.34
RFPL3-201ENST00000249007 CYP2S1Q96SQ9 504 aa12.92□□□□□ -0.34
RFPL3-201ENST00000249007 FAM124BQ9H5Z6 455 aaPredicted RBP12.92□□□□□ -0.34
RFPL3-201ENST00000249007 TMEM134Q9H6X4 195 aa12.92□□□□□ -0.34
RFPL3-201ENST00000249007 PLEKHA5Q9HAU0 1116 aa12.92□□□□□ -0.34
RFPL3-201ENST00000249007 ZDHHC4Q9NPG8 344 aa12.92□□□□□ -0.34
RFPL3-201ENST00000249007 SUSD2Q9UGT4 822 aa12.92□□□□□ -0.34
RFPL3-201ENST00000249007 SPTAN1Q13813 2472 aaKnown RBP12.92□□□□□ -0.34
RFPL3-201ENST00000249007 STK36Q9NRP7 1315 aa12.92□□□□□ -0.34
RFPL3-201ENST00000249007 FAM149AA5PLN7 773 aa12.91□□□□□ -0.34
RFPL3-201ENST00000249007 MYMKA6NI61 221 aa12.91□□□□□ -0.34
RFPL3-201ENST00000249007 ADAM23O75077 832 aa12.91□□□□□ -0.34
RFPL3-201ENST00000249007 TADA3O75528 432 aa12.91□□□□□ -0.34
RFPL3-201ENST00000249007 ATXN1LP0C7T5 689 aaKnown RBP12.91□□□□□ -0.34
RFPL3-201ENST00000249007 CSH1P0DML2 217 aa12.91□□□□□ -0.34
RFPL3-201ENST00000249007 CSH2P0DML3 217 aa12.91□□□□□ -0.34
RFPL3-201ENST00000249007 CYP3A5P20815 502 aa12.91□□□□□ -0.34
RFPL3-201ENST00000249007 GUCY2FP51841 1108 aa12.91□□□□□ -0.34
RFPL3-201ENST00000249007 LILRA4P59901 499 aa12.91□□□□□ -0.34
RFPL3-201ENST00000249007 CFHR1Q03591 330 aa12.91□□□□□ -0.34
RFPL3-201ENST00000249007 SLC20A2Q08357 652 aa12.91□□□□□ -0.34
RFPL3-201ENST00000249007 SMARCB1Q12824 385 aa12.91□□□□□ -0.34
RFPL3-201ENST00000249007 GRIK2Q13002 908 aa12.91□□□□□ -0.34
RFPL3-201ENST00000249007 NR5A1Q13285 461 aa12.91□□□□□ -0.34
RFPL3-201ENST00000249007 ZBTB6Q15916 424 aa12.91□□□□□ -0.34
RFPL3-201ENST00000249007 GAB4Q2WGN9 574 aa12.91□□□□□ -0.34
RFPL3-201ENST00000249007 CENPQQ7L2Z9 268 aaPredicted RBP12.91□□□□□ -0.34
RFPL3-201ENST00000249007 RGL4Q8IZJ4 473 aa12.91□□□□□ -0.34
RFPL3-201ENST00000249007 ZBTB45Q96K62 511 aaPredicted RBP12.91□□□□□ -0.34
RFPL3-201ENST00000249007 MTMR9Q96QG7 549 aa12.91□□□□□ -0.34
RFPL3-201ENST00000249007 ZDHHC5Q9C0B5 715 aa12.91□□□□□ -0.34
RFPL3-201ENST00000249007 TOR4AQ9NXH8 423 aa12.91□□□□□ -0.34
RFPL3-201ENST00000249007 CALCOCO1Q9P1Z2 691 aa12.91□□□□□ -0.34
RFPL3-201ENST00000249007 ARHGAP28Q9P2N2 729 aa12.91□□□□□ -0.34
RFPL3-201ENST00000249007 TSC2P49815 1807 aa12.91□□□□□ -0.34
RFPL3-201ENST00000249007 MYO9AB2RTY4 2548 aa12.91□□□□□ -0.34
RFPL3-201ENST00000249007 PPEF2O14830 753 aa12.91□□□□□ -0.34
RFPL3-201ENST00000249007 XPOTO43592 962 aaKnown RBP12.91□□□□□ -0.34
RFPL3-201ENST00000249007 TOM1L1O75674 476 aa12.91□□□□□ -0.34
RFPL3-201ENST00000249007 DKK1O94907 266 aa12.91□□□□□ -0.34
RFPL3-201ENST00000249007 KAT7O95251 611 aa12.91□□□□□ -0.34
RFPL3-201ENST00000249007 CHRM1P11229 460 aaPredicted RBP12.91□□□□□ -0.34
RFPL3-201ENST00000249007 GNSP15586 552 aa12.91□□□□□ -0.34
RFPL3-201ENST00000249007 RPA1P27694 616 aa12.91□□□□□ -0.34
RFPL3-201ENST00000249007 KIR2DL1P43626 348 aaPredicted RBP12.91□□□□□ -0.34
RFPL3-201ENST00000249007 MESP2Q0VG99 397 aa12.91□□□□□ -0.34
RFPL3-201ENST00000249007 EMC10Q5UCC4 262 aa12.91□□□□□ -0.34
RFPL3-201ENST00000249007 SPATA18Q8TC71 538 aa12.91□□□□□ -0.34
RFPL3-201ENST00000249007 KCNB2Q92953 911 aa12.91□□□□□ -0.34
RFPL3-201ENST00000249007 DRC1Q96MC2 740 aa12.91□□□□□ -0.34
RFPL3-201ENST00000249007 BHMT2Q9H2M3 363 aa12.91□□□□□ -0.34
RFPL3-201ENST00000249007 PRDM16Q9HAZ2 1276 aa12.91□□□□□ -0.34
RFPL3-201ENST00000249007 UXTQ9UBK9 157 aaPredicted RBP12.91□□□□□ -0.34
RFPL3-201ENST00000249007 SNX14Q9Y5W7 946 aa12.91□□□□□ -0.34
RFPL3-201ENST00000249007 ANK1P16157 1881 aa12.9□□□□□ -0.34
RFPL3-201ENST00000249007 IGHV1OR15-9A0A0B4J2B8 117 aa12.9□□□□□ -0.34
RFPL3-201ENST00000249007 TTC26A0AVF1 554 aa12.9□□□□□ -0.34
RFPL3-201ENST00000249007 GOLGA8CPA6NN73 597 aa12.9□□□□□ -0.34
RFPL3-201ENST00000249007 APODP05090 189 aa12.9□□□□□ -0.34
RFPL3-201ENST00000249007 CYP11A1P05108 521 aa12.9□□□□□ -0.34
RFPL3-201ENST00000249007 GABRG2P18507 467 aa12.9□□□□□ -0.34
RFPL3-201ENST00000249007 BRD2P25440 801 aaKnown RBP12.9□□□□□ -0.34
RFPL3-201ENST00000249007 SCRN1Q12765 414 aa12.9□□□□□ -0.34
RFPL3-201ENST00000249007 STK3Q13188 491 aa12.9□□□□□ -0.34
RFPL3-201ENST00000249007 KCNB1Q14721 858 aa12.9□□□□□ -0.34
RFPL3-201ENST00000249007 ZC2HC1CQ53FD0 456 aaPredicted RBP12.9□□□□□ -0.34
RFPL3-201ENST00000249007 SYCP2LQ5T4T6 812 aa12.9□□□□□ -0.34
RFPL3-201ENST00000249007 LRRC69Q6ZNQ3 347 aa12.9□□□□□ -0.34
RFPL3-201ENST00000249007 LRRTM3Q86VH5 581 aa12.9□□□□□ -0.34
RFPL3-201ENST00000249007 ERMNQ8TAM6 284 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms