RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 MAGEA4P43358 317 aa16.57■□□□□ 0.24
LRFN1-201ENST00000248668 SPRED3Q2MJR0 410 aa16.57■□□□□ 0.24
LRFN1-201ENST00000248668 KIRREL3Q8IZU9 778 aa16.57■□□□□ 0.24
LRFN1-201ENST00000248668 OR6J1Q8NGC5 347 aa16.57■□□□□ 0.24
LRFN1-201ENST00000248668 ADPGKQ9BRR6 497 aa16.57■□□□□ 0.24
LRFN1-201ENST00000248668 MIPP30301 263 aa16.56■□□□□ 0.24
LRFN1-201ENST00000248668 SLC25A11Q02978 314 aaKnown RBP16.56■□□□□ 0.24
LRFN1-201ENST00000248668 TMED2Q15363 201 aa16.56■□□□□ 0.24
LRFN1-201ENST00000248668 PPP1R2P3Q6NXS1 205 aa16.56■□□□□ 0.24
LRFN1-201ENST00000248668 RFX6Q8HWS3 928 aa16.56■□□□□ 0.24
LRFN1-201ENST00000248668 KCTD6Q8NC69 237 aa16.56■□□□□ 0.24
LRFN1-201ENST00000248668 CXorf38Q8TB03 319 aa16.56■□□□□ 0.24
LRFN1-201ENST00000248668 OSMRQ99650 979 aa16.56■□□□□ 0.24
LRFN1-201ENST00000248668 SNX9Q9Y5X1 595 aa16.56■□□□□ 0.24
LRFN1-201ENST00000248668 MAGEB2O15479 319 aa16.56■□□□□ 0.24
LRFN1-201ENST00000248668 DRD4P21917 467 aa16.56■□□□□ 0.24
LRFN1-201ENST00000248668 TNFAIP2Q03169 654 aa16.56■□□□□ 0.24
LRFN1-201ENST00000248668 MARCH8Q5T0T0 291 aa16.56■□□□□ 0.24
LRFN1-201ENST00000248668 HIBCHQ6NVY1 386 aaPredicted RBP16.56■□□□□ 0.24
LRFN1-201ENST00000248668 NPNTQ6UXI9 565 aa16.56■□□□□ 0.24
LRFN1-201ENST00000248668 GPR142Q7Z601 462 aa16.56■□□□□ 0.24
LRFN1-201ENST00000248668 ALLCQ8N6M5 410 aa16.56■□□□□ 0.24
LRFN1-201ENST00000248668 VPS37BQ9H9H4 285 aa16.56■□□□□ 0.24
LRFN1-201ENST00000248668 GPATCH2LQ9NWQ4 482 aa16.56■□□□□ 0.24
LRFN1-201ENST00000248668 KAT6AQ92794 2004 aa16.56■□□□□ 0.24
LRFN1-201ENST00000248668 E5RJQ4 531 aa16.55■□□□□ 0.24
LRFN1-201ENST00000248668 DYNC1LI2O43237 492 aaPredicted RBP16.55■□□□□ 0.24
LRFN1-201ENST00000248668 VCPP55072 806 aaKnown RBP16.55■□□□□ 0.24
LRFN1-201ENST00000248668 SCYL2Q6P3W7 929 aa16.55■□□□□ 0.24
LRFN1-201ENST00000248668 ACOT1Q86TX2 421 aa16.55■□□□□ 0.24
LRFN1-201ENST00000248668 SESTD1Q86VW0 696 aa16.55■□□□□ 0.24
LRFN1-201ENST00000248668 ZBED8Q8IZ13 594 aa16.55■□□□□ 0.24
LRFN1-201ENST00000248668 ZC3H15Q8WU90 426 aaKnown RBP16.55■□□□□ 0.24
LRFN1-201ENST00000248668 C18orf25Q96B23 403 aaPredicted RBP16.55■□□□□ 0.24
LRFN1-201ENST00000248668 EIF2AQ9BY44 585 aaKnown RBP16.55■□□□□ 0.24
LRFN1-201ENST00000248668 TSPAN16Q9UKR8 245 aa16.55■□□□□ 0.24
LRFN1-201ENST00000248668 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.55■□□□□ 0.24
LRFN1-201ENST00000248668 ANK1P16157 1881 aa16.55■□□□□ 0.24
LRFN1-201ENST00000248668 ZKSCAN8Q15776 578 aaPredicted RBP16.55■□□□□ 0.24
LRFN1-201ENST00000248668 NAIF1Q69YI7 327 aaPredicted RBP16.55■□□□□ 0.24
LRFN1-201ENST00000248668 CACNA2D3Q8IZS8 1091 aa16.55■□□□□ 0.24
LRFN1-201ENST00000248668 SHCBP1Q8NEM2 672 aa16.55■□□□□ 0.24
LRFN1-201ENST00000248668 MS4A4AQ96JQ5 239 aa16.55■□□□□ 0.24
LRFN1-201ENST00000248668 ELAC2Q9BQ52 826 aaKnown RBP16.55■□□□□ 0.24
LRFN1-201ENST00000248668 VTA1Q9NP79 307 aa16.55■□□□□ 0.24
LRFN1-201ENST00000248668 GGT7Q9UJ14 662 aa16.55■□□□□ 0.24
LRFN1-201ENST00000248668 HGSO14964 777 aaPredicted RBP16.55■□□□□ 0.24
LRFN1-201ENST00000248668 KIF1CO43896 1103 aaKnown RBP16.55■□□□□ 0.24
LRFN1-201ENST00000248668 PAEPP09466 180 aa16.55■□□□□ 0.24
LRFN1-201ENST00000248668 RDXP35241 583 aaKnown RBP16.55■□□□□ 0.24
LRFN1-201ENST00000248668 ACTN3Q08043 901 aaPredicted RBP16.55■□□□□ 0.24
LRFN1-201ENST00000248668 GKAP1Q5VSY0 366 aaPredicted RBP16.55■□□□□ 0.24
LRFN1-201ENST00000248668 TAOK1Q7L7X3 1001 aa16.55■□□□□ 0.24
LRFN1-201ENST00000248668 ZC3H18Q86VM9 953 aaKnown RBP16.55■□□□□ 0.24
LRFN1-201ENST00000248668 CCDC13Q8IYE1 715 aa16.55■□□□□ 0.24
LRFN1-201ENST00000248668 ZMAT2Q96NC0 199 aaKnown RBP16.55■□□□□ 0.24
LRFN1-201ENST00000248668 PAIP2Q9BPZ3 127 aaKnown RBP16.55■□□□□ 0.24
LRFN1-201ENST00000248668 KLK14Q9P0G3 267 aa16.55■□□□□ 0.24
LRFN1-201ENST00000248668 TUBGCP4Q9UGJ1 667 aa16.55■□□□□ 0.24
LRFN1-201ENST00000248668 NAALADL1Q9UQQ1 740 aa16.55■□□□□ 0.24
LRFN1-201ENST00000248668 C3orf70A6NLC5 250 aaPredicted RBP16.54■□□□□ 0.24
LRFN1-201ENST00000248668 DNALI1O14645 258 aaPredicted RBP16.54■□□□□ 0.24
LRFN1-201ENST00000248668 AKAP5P24588 427 aa16.54■□□□□ 0.24
LRFN1-201ENST00000248668 GPD2P43304 727 aa16.54■□□□□ 0.24
LRFN1-201ENST00000248668 MPP2Q14168 576 aa16.54■□□□□ 0.24
LRFN1-201ENST00000248668 CNGA2Q16280 664 aa16.54■□□□□ 0.24
LRFN1-201ENST00000248668 HADHQ16836 314 aaKnown RBP16.54■□□□□ 0.24
LRFN1-201ENST00000248668 MICALCLQ6ZW33 695 aa16.54■□□□□ 0.24
LRFN1-201ENST00000248668 CATSPER4Q7RTX7 472 aa16.54■□□□□ 0.24
LRFN1-201ENST00000248668 C7orf31Q8N865 590 aa16.54■□□□□ 0.24
LRFN1-201ENST00000248668 MRPL45Q9BRJ2 306 aaKnown RBP16.54■□□□□ 0.24
LRFN1-201ENST00000248668 LHX5Q9H2C1 402 aa16.54■□□□□ 0.24
LRFN1-201ENST00000248668 TRIP11Q15643 1979 aa16.54■□□□□ 0.24
LRFN1-201ENST00000248668 MMP3P08254 477 aa16.54■□□□□ 0.24
LRFN1-201ENST00000248668 BRAFP15056 766 aa16.54■□□□□ 0.24
LRFN1-201ENST00000248668 KDELR1P24390 212 aa16.54■□□□□ 0.24
LRFN1-201ENST00000248668 CAV1Q03135 178 aa16.54■□□□□ 0.24
LRFN1-201ENST00000248668 TAP1Q03518 808 aa16.54■□□□□ 0.24
LRFN1-201ENST00000248668 OASLQ15646 514 aaKnown RBP16.54■□□□□ 0.24
LRFN1-201ENST00000248668 LRRC38Q5VT99 294 aa16.54■□□□□ 0.24
LRFN1-201ENST00000248668 ANKRD22Q5VYY1 191 aa16.54■□□□□ 0.24
LRFN1-201ENST00000248668 LINC01465Q8N7H1 131 aa16.54■□□□□ 0.24
LRFN1-201ENST00000248668 N4BP2L2Q92802 583 aaPredicted RBP16.54■□□□□ 0.24
LRFN1-201ENST00000248668 PEBP4Q96S96 227 aa16.54■□□□□ 0.24
LRFN1-201ENST00000248668 KATNBL1Q9H079 304 aa16.54■□□□□ 0.24
LRFN1-201ENST00000248668 MIS12Q9H081 205 aa16.54■□□□□ 0.24
LRFN1-201ENST00000248668 STMN4Q9H169 189 aaPredicted RBP16.54■□□□□ 0.24
LRFN1-201ENST00000248668 DDX56Q9NY93 547 aaKnown RBP16.54■□□□□ 0.24
LRFN1-201ENST00000248668 USP18Q9UMW8 372 aa16.54■□□□□ 0.24
LRFN1-201ENST00000248668 GOLGA6L7A0A1B0GV03 622 aa16.54■□□□□ 0.24
LRFN1-201ENST00000248668 RNF8O76064 485 aa16.54■□□□□ 0.24
LRFN1-201ENST00000248668 PAX7P23759 505 aa16.54■□□□□ 0.24
LRFN1-201ENST00000248668 MYO1EQ12965 1108 aa16.54■□□□□ 0.24
LRFN1-201ENST00000248668 GOLGA7BQ2TAP0 167 aa16.54■□□□□ 0.24
LRFN1-201ENST00000248668 TRNP1Q6NT89 227 aa16.54■□□□□ 0.24
LRFN1-201ENST00000248668 FAM183BPQ6ZVS7 135 aa16.54■□□□□ 0.24
LRFN1-201ENST00000248668 CCDC33Q8N5R6 958 aa16.54■□□□□ 0.24
LRFN1-201ENST00000248668 FAM71DQ8N9W8 422 aa16.54■□□□□ 0.24
LRFN1-201ENST00000248668 NPLOC4Q8TAT6 608 aa16.54■□□□□ 0.24
LRFN1-201ENST00000248668 CFAP57Q96MR6 1250 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms