RNA–Protein interactions for RNA: ENST00000245923.8

RTN2-201, Transcript of reticulon 2, humanhuman

TSL 1 (best) BASIC

Gene RTN2, Length 2,293 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN2-201ENST00000245923 CSDE1O75534 798 aaKnown RBP27.62■■■□□ 2.01
RTN2-201ENST00000245923 VDRP11473 427 aa27.62■■■□□ 2.01
RTN2-201ENST00000245923 STX2P32856 288 aa27.62■■■□□ 2.01
RTN2-201ENST00000245923 GPD2P43304 727 aa27.62■■■□□ 2.01
RTN2-201ENST00000245923 NUGGCQ68CJ6 796 aa27.62■■■□□ 2.01
RTN2-201ENST00000245923 GDAP1Q8TB36 358 aa27.62■■■□□ 2.01
RTN2-201ENST00000245923 SGSM3Q96HU1 749 aa27.62■■■□□ 2.01
RTN2-201ENST00000245923 SLC12A4Q9UP95 1085 aa27.62■■■□□ 2.01
RTN2-201ENST00000245923 TTLL12Q14166 644 aaPredicted RBP27.61■■■□□ 2.01
RTN2-201ENST00000245923 RASA2Q15283 850 aa27.61■■■□□ 2.01
RTN2-201ENST00000245923 ZBED8Q8IZ13 594 aa27.61■■■□□ 2.01
RTN2-201ENST00000245923 M0QYV0 167 aa27.61■■■□□ 2.01
RTN2-201ENST00000245923 ARF4P18085 180 aaPredicted RBP27.61■■■□□ 2.01
RTN2-201ENST00000245923 PSMC4P43686 418 aa27.61■■■□□ 2.01
RTN2-201ENST00000245923 SF3A3Q12874 501 aaKnown RBP eCLIP27.61■■■□□ 2.01
RTN2-201ENST00000245923 PPIL6Q8IXY8 311 aa27.61■■■□□ 2.01
RTN2-201ENST00000245923 HPDLQ96IR7 371 aa27.61■■■□□ 2.01
RTN2-201ENST00000245923 CPB2Q96IY4 423 aa27.61■■■□□ 2.01
RTN2-201ENST00000245923 FAM47DPA6NHR8 397 aa27.6■■■□□ 2.01
RTN2-201ENST00000245923 CD48P09326 243 aa27.6■■■□□ 2.01
RTN2-201ENST00000245923 MIPP30301 263 aa27.6■■■□□ 2.01
RTN2-201ENST00000245923 TAPT1Q6NXT6 567 aa27.6■■■□□ 2.01
RTN2-201ENST00000245923 ILDR2Q71H61 639 aa27.6■■■□□ 2.01
RTN2-201ENST00000245923 TGS1Q96RS0 853 aaKnown RBP27.6■■■□□ 2.01
RTN2-201ENST00000245923 FAM124BQ9H5Z6 455 aaPredicted RBP27.6■■■□□ 2.01
RTN2-201ENST00000245923 KLC4Q9NSK0 619 aa27.6■■■□□ 2.01
RTN2-201ENST00000245923 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP27.6■■■□□ 2.01
RTN2-201ENST00000245923 CITO14578 2027 aa27.6■■■□□ 2.01
RTN2-201ENST00000245923 RNF8O76064 485 aa27.6■■■□□ 2.01
RTN2-201ENST00000245923 SUN1O94901 812 aa27.6■■■□□ 2.01
RTN2-201ENST00000245923 TRUB2O95900 331 aaKnown RBP27.6■■■□□ 2.01
RTN2-201ENST00000245923 CTCFP49711 727 aaPredicted RBP27.6■■■□□ 2.01
RTN2-201ENST00000245923 GDF10P55107 478 aa27.6■■■□□ 2.01
RTN2-201ENST00000245923 INCA1Q0VD86 236 aa27.6■■■□□ 2.01
RTN2-201ENST00000245923 PDIA2Q13087 525 aaKnown RBP27.6■■■□□ 2.01
RTN2-201ENST00000245923 TMEM132DQ14C87 1099 aa27.6■■■□□ 2.01
RTN2-201ENST00000245923 HIF1AQ16665 826 aa27.6■■■□□ 2.01
RTN2-201ENST00000245923 GJC2Q5T442 439 aaPredicted RBP27.6■■■□□ 2.01
RTN2-201ENST00000245923 KCTD6Q8NC69 237 aa27.6■■■□□ 2.01
RTN2-201ENST00000245923 VPS37BQ9H9H4 285 aa27.6■■■□□ 2.01
RTN2-201ENST00000245923 AKT3Q9Y243 479 aa27.6■■■□□ 2.01
RTN2-201ENST00000245923 COL1A2P08123 1366 aa27.6■■■□□ 2.01
RTN2-201ENST00000245923 STAU1O95793 577 aaKnown RBP27.59■■■□□ 2.01
RTN2-201ENST00000245923 SLC18A1P54219 525 aa27.59■■■□□ 2.01
RTN2-201ENST00000245923 HP1BP3Q5SSJ5 553 aaPredicted RBP27.59■■■□□ 2.01
RTN2-201ENST00000245923 ICE2Q659A1 982 aa27.59■■■□□ 2.01
RTN2-201ENST00000245923 FUKQ8N0W3 1084 aa27.59■■■□□ 2.01
RTN2-201ENST00000245923 NAT8LQ8N9F0 302 aa27.59■■■□□ 2.01
RTN2-201ENST00000245923 CPT1BQ92523 772 aa27.59■■■□□ 2.01
RTN2-201ENST00000245923 PCSK1NQ9UHG2 260 aa27.59■■■□□ 2.01
RTN2-201ENST00000245923 SLC24A2Q9UI40 661 aa27.59■■■□□ 2.01
RTN2-201ENST00000245923 BARX2Q9UMQ3 279 aaPredicted RBP27.59■■■□□ 2.01
RTN2-201ENST00000245923 PRPF4O43172 522 aaKnown RBP eCLIP27.58■■■□□ 2.01
RTN2-201ENST00000245923 PCK1P35558 622 aa27.58■■■□□ 2.01
RTN2-201ENST00000245923 MAMDC4Q6UXC1 1216 aa27.58■■■□□ 2.01
RTN2-201ENST00000245923 HAUS2Q9NVX0 235 aa27.58■■■□□ 2.01
RTN2-201ENST00000245923 ASNSD1Q9NWL6 643 aa27.58■■■□□ 2.01
RTN2-201ENST00000245923 SENP1Q9P0U3 644 aa27.58■■■□□ 2.01
RTN2-201ENST00000245923 ITGA11Q9UKX5 1188 aa27.58■■■□□ 2.01
RTN2-201ENST00000245923 USP18Q9UMW8 372 aa27.58■■■□□ 2.01
RTN2-201ENST00000245923 AGAP1Q9UPQ3 857 aa27.58■■■□□ 2.01
RTN2-201ENST00000245923 POC1B-GALNT4F8VUJ3 575 aa27.58■■■□□ 2.01
RTN2-201ENST00000245923 APOC4-APOC2K7ER74 178 aa27.58■■■□□ 2.01
RTN2-201ENST00000245923 APOC2P02655 101 aa27.58■■■□□ 2.01
RTN2-201ENST00000245923 RPL22P35268 128 aaKnown RBP27.58■■■□□ 2.01
RTN2-201ENST00000245923 MAP1SQ66K74 1059 aaPredicted RBP27.58■■■□□ 2.01
RTN2-201ENST00000245923 PPTC7Q8NI37 304 aa27.58■■■□□ 2.01
RTN2-201ENST00000245923 RSAD2Q8WXG1 361 aa27.58■■■□□ 2.01
RTN2-201ENST00000245923 HEXIM2Q96MH2 286 aaKnown RBP27.58■■■□□ 2.01
RTN2-201ENST00000245923 PPP1R16BQ96T49 567 aa27.58■■■□□ 2.01
RTN2-201ENST00000245923 ADPGKQ9BRR6 497 aa27.58■■■□□ 2.01
RTN2-201ENST00000245923 ABCF3Q9NUQ8 709 aa27.58■■■□□ 2.01
RTN2-201ENST00000245923 C2CD2Q9Y426 696 aa27.58■■■□□ 2.01
RTN2-201ENST00000245923 VTNP04004 478 aa27.57■■■□□ 2
RTN2-201ENST00000245923 ZNF143P52747 638 aaPredicted RBP27.57■■■□□ 2
RTN2-201ENST00000245923 SPATA21Q7Z572 469 aa27.57■■■□□ 2
RTN2-201ENST00000245923 RFX6Q8HWS3 928 aa27.57■■■□□ 2
RTN2-201ENST00000245923 C10orf88Q9H8K7 445 aa27.57■■■□□ 2
RTN2-201ENST00000245923 RDXP35241 583 aaKnown RBP27.57■■■□□ 2
RTN2-201ENST00000245923 WDR4P57081 412 aaKnown RBP27.57■■■□□ 2
RTN2-201ENST00000245923 IL9RQ01113 521 aa27.57■■■□□ 2
RTN2-201ENST00000245923 TAF5Q15542 800 aa27.57■■■□□ 2
RTN2-201ENST00000245923 ZNF792Q3KQV3 632 aa27.57■■■□□ 2
RTN2-201ENST00000245923 FAM102AQ5T9C2 384 aaPredicted RBP27.57■■■□□ 2
RTN2-201ENST00000245923 ANKRD22Q5VYY1 191 aa27.57■■■□□ 2
RTN2-201ENST00000245923 TTC39CQ8N584 583 aa27.57■■■□□ 2
RTN2-201ENST00000245923 DENND1AQ8TEH3 1009 aa27.57■■■□□ 2
RTN2-201ENST00000245923 EMID1Q96A84 441 aaPredicted RBP27.57■■■□□ 2
RTN2-201ENST00000245923 PLCD4Q9BRC7 762 aa27.57■■■□□ 2
RTN2-201ENST00000245923 RSAD1Q9HA92 442 aa27.57■■■□□ 2
RTN2-201ENST00000245923 VTA1Q9NP79 307 aa27.57■■■□□ 2
RTN2-201ENST00000245923 PRKAG3Q9UGI9 489 aa27.57■■■□□ 2
RTN2-201ENST00000245923 FETUBQ9UGM5 382 aa27.57■■■□□ 2
RTN2-201ENST00000245923 KIAA1257Q9ULG3 409 aa27.57■■■□□ 2
RTN2-201ENST00000245923 RBM47A0AV96 593 aaKnown RBP27.56■■■□□ 2
RTN2-201ENST00000245923 ENDOD1O94919 500 aa27.56■■■□□ 2
RTN2-201ENST00000245923 TAC1P20366 129 aa27.56■■■□□ 2
RTN2-201ENST00000245923 ARL4CP56559 192 aa27.56■■■□□ 2
RTN2-201ENST00000245923 GPX6P59796 221 aa27.56■■■□□ 2
RTN2-201ENST00000245923 RBP5P82980 135 aa27.56■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms