RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 KIF3CO14782 793 aa22.7■■□□□ 1.22
SH2D3A-201ENST00000245908 BANF1O75531 89 aa22.7■■□□□ 1.22
SH2D3A-201ENST00000245908 CXCL8P10145 99 aa22.7■■□□□ 1.22
SH2D3A-201ENST00000245908 CLNS1AP54105 237 aaKnown RBP22.7■■□□□ 1.22
SH2D3A-201ENST00000245908 MYO1EQ12965 1108 aa22.7■■□□□ 1.22
SH2D3A-201ENST00000245908 PDK4Q16654 411 aa22.7■■□□□ 1.22
SH2D3A-201ENST00000245908 ANKRD22Q5VYY1 191 aa22.7■■□□□ 1.22
SH2D3A-201ENST00000245908 PNMA8AQ86V59 439 aaPredicted RBP22.7■■□□□ 1.22
SH2D3A-201ENST00000245908 ANKMY2Q8IV38 441 aa22.7■■□□□ 1.22
SH2D3A-201ENST00000245908 ANKLE1Q8NAG6 615 aa22.7■■□□□ 1.22
SH2D3A-201ENST00000245908 KLHL29Q96CT2 875 aa22.7■■□□□ 1.22
SH2D3A-201ENST00000245908 NLRP4Q96MN2 994 aa22.7■■□□□ 1.22
SH2D3A-201ENST00000245908 INO80BQ9C086 356 aaPredicted RBP22.7■■□□□ 1.22
SH2D3A-201ENST00000245908 RPF1Q9H9Y2 349 aaKnown RBP22.7■■□□□ 1.22
SH2D3A-201ENST00000245908 RABGEF1Q9UJ41 708 aa22.7■■□□□ 1.22
SH2D3A-201ENST00000245908 ZMYND8Q9ULU4 1186 aaPredicted RBP22.7■■□□□ 1.22
SH2D3A-201ENST00000245908 TNFSF13BQ9Y275 285 aa22.7■■□□□ 1.22
SH2D3A-201ENST00000245908 OTOFQ9HC10 1997 aa22.7■■□□□ 1.22
SH2D3A-201ENST00000245908 TYROBPO43914 113 aa22.69■■□□□ 1.22
SH2D3A-201ENST00000245908 ERBB2P04626 1255 aa22.69■■□□□ 1.22
SH2D3A-201ENST00000245908 KRT19P08727 400 aa22.69■■□□□ 1.22
SH2D3A-201ENST00000245908 PHBP35232 272 aa22.69■■□□□ 1.22
SH2D3A-201ENST00000245908 RPL22P35268 128 aaKnown RBP22.69■■□□□ 1.22
SH2D3A-201ENST00000245908 SKIV2L2P42285 1042 aaKnown RBP22.69■■□□□ 1.22
SH2D3A-201ENST00000245908 GEMIN4P57678 1058 aaKnown RBP22.69■■□□□ 1.22
SH2D3A-201ENST00000245908 GAD2Q05329 585 aa22.69■■□□□ 1.22
SH2D3A-201ENST00000245908 MBTD1Q05BQ5 628 aa22.69■■□□□ 1.22
SH2D3A-201ENST00000245908 ASRGL1Q7L266 308 aa22.69■■□□□ 1.22
SH2D3A-201ENST00000245908 CDR2LQ86X02 465 aaPredicted RBP22.69■■□□□ 1.22
SH2D3A-201ENST00000245908 TMEM192Q8IY95 271 aa22.69■■□□□ 1.22
SH2D3A-201ENST00000245908 C4orf33Q8N1A6 199 aa22.69■■□□□ 1.22
SH2D3A-201ENST00000245908 ATP11CQ8NB49 1132 aa22.69■■□□□ 1.22
SH2D3A-201ENST00000245908 SLC4A11Q8NBS3 891 aa22.69■■□□□ 1.22
SH2D3A-201ENST00000245908 CNKSR2Q8WXI2 1034 aa22.69■■□□□ 1.22
SH2D3A-201ENST00000245908 FGD4Q96M96 766 aa22.69■■□□□ 1.22
SH2D3A-201ENST00000245908 MPHOSPH6Q99547 160 aaKnown RBP22.69■■□□□ 1.22
SH2D3A-201ENST00000245908 SSU72Q9NP77 194 aaKnown RBP22.69■■□□□ 1.22
SH2D3A-201ENST00000245908 ARHGEF3Q9NR81 526 aa22.69■■□□□ 1.22
SH2D3A-201ENST00000245908 GRID1Q9ULK0 1009 aa22.69■■□□□ 1.22
SH2D3A-201ENST00000245908 E7ESA3 106 aa22.69■■□□□ 1.22
SH2D3A-201ENST00000245908 GJB1P08034 283 aa22.69■■□□□ 1.22
SH2D3A-201ENST00000245908 CALRP27797 417 aaKnown RBP22.69■■□□□ 1.22
SH2D3A-201ENST00000245908 RPA3P35244 121 aaPredicted RBP22.69■■□□□ 1.22
SH2D3A-201ENST00000245908 CDH8P55286 799 aa22.69■■□□□ 1.22
SH2D3A-201ENST00000245908 SLC8A3P57103 927 aa22.69■■□□□ 1.22
SH2D3A-201ENST00000245908 DNAJC3Q13217 504 aa22.69■■□□□ 1.22
SH2D3A-201ENST00000245908 FNBP1LQ5T0N5 605 aa22.69■■□□□ 1.22
SH2D3A-201ENST00000245908 EMC1Q8N766 993 aa22.69■■□□□ 1.22
SH2D3A-201ENST00000245908 C1orf127Q8N9H9 656 aa22.69■■□□□ 1.22
SH2D3A-201ENST00000245908 PYROXD1Q8WU10 500 aa22.69■■□□□ 1.22
SH2D3A-201ENST00000245908 TRAPPC12Q8WVT3 735 aa22.69■■□□□ 1.22
SH2D3A-201ENST00000245908 RSAD2Q8WXG1 361 aa22.69■■□□□ 1.22
SH2D3A-201ENST00000245908 ZNF668Q96K58 619 aaPredicted RBP22.69■■□□□ 1.22
SH2D3A-201ENST00000245908 C10orf88Q9H8K7 445 aa22.69■■□□□ 1.22
SH2D3A-201ENST00000245908 PHTF1Q9UMS5 762 aa22.69■■□□□ 1.22
SH2D3A-201ENST00000245908 EPB41L3Q9Y2J2 1087 aaPredicted RBP22.69■■□□□ 1.22
SH2D3A-201ENST00000245908 CNMDO75829 334 aa22.68■■□□□ 1.22
SH2D3A-201ENST00000245908 CD48P09326 243 aa22.68■■□□□ 1.22
SH2D3A-201ENST00000245908 CCNB1P14635 433 aa22.68■■□□□ 1.22
SH2D3A-201ENST00000245908 PTPN11Q06124 597 aaPredicted RBP22.68■■□□□ 1.22
SH2D3A-201ENST00000245908 TMEM132AQ24JP5 1023 aa22.68■■□□□ 1.22
SH2D3A-201ENST00000245908 MSS51Q4VC12 460 aa22.68■■□□□ 1.22
SH2D3A-201ENST00000245908 CMASQ8NFW8 434 aaPredicted RBP22.68■■□□□ 1.22
SH2D3A-201ENST00000245908 TRIM6Q9C030 488 aaPredicted RBP22.68■■□□□ 1.22
SH2D3A-201ENST00000245908 R3HDMLQ9H3Y0 253 aa22.68■■□□□ 1.22
SH2D3A-201ENST00000245908 SYNCQ9H7C4 482 aa22.68■■□□□ 1.22
SH2D3A-201ENST00000245908 A0A1W2PPM1 405 aa22.68■■□□□ 1.22
SH2D3A-201ENST00000245908 SMAPO00193 183 aa22.68■■□□□ 1.22
SH2D3A-201ENST00000245908 NFICP08651 508 aa22.68■■□□□ 1.22
SH2D3A-201ENST00000245908 ALADP13716 330 aa22.68■■□□□ 1.22
SH2D3A-201ENST00000245908 CA4P22748 312 aa22.68■■□□□ 1.22
SH2D3A-201ENST00000245908 PAX7P23759 505 aa22.68■■□□□ 1.22
SH2D3A-201ENST00000245908 GABRB2P47870 512 aa22.68■■□□□ 1.22
SH2D3A-201ENST00000245908 ACAP1Q15027 740 aa22.68■■□□□ 1.22
SH2D3A-201ENST00000245908 GADL1Q6ZQY3 521 aa22.68■■□□□ 1.22
SH2D3A-201ENST00000245908 MCRS1Q96EZ8 462 aa22.68■■□□□ 1.22
SH2D3A-201ENST00000245908 TWNKQ96RR1 684 aa22.68■■□□□ 1.22
SH2D3A-201ENST00000245908 DHRS4Q9BTZ2 278 aa22.68■■□□□ 1.22
SH2D3A-201ENST00000245908 MAK16Q9BXY0 300 aaKnown RBP22.68■■□□□ 1.22
SH2D3A-201ENST00000245908 MINDY3Q9H8M7 445 aa22.68■■□□□ 1.22
SH2D3A-201ENST00000245908 APOC4-APOC2K7ER74 178 aa22.67■■□□□ 1.22
SH2D3A-201ENST00000245908 APOC2P02655 101 aa22.67■■□□□ 1.22
SH2D3A-201ENST00000245908 SLC26A2P50443 739 aa22.67■■□□□ 1.22
SH2D3A-201ENST00000245908 MOGSQ13724 837 aa22.67■■□□□ 1.22
SH2D3A-201ENST00000245908 SLC1A5Q15758 541 aa22.67■■□□□ 1.22
SH2D3A-201ENST00000245908 ZC3H12AQ5D1E8 599 aaKnown RBP22.67■■□□□ 1.22
SH2D3A-201ENST00000245908 RFX6Q8HWS3 928 aa22.67■■□□□ 1.22
SH2D3A-201ENST00000245908 SPOCK2Q92563 424 aa22.67■■□□□ 1.22
SH2D3A-201ENST00000245908 WDR83Q9BRX9 315 aaKnown RBP22.67■■□□□ 1.22
SH2D3A-201ENST00000245908 ELOVL4Q9GZR5 314 aa22.67■■□□□ 1.22
SH2D3A-201ENST00000245908 ACSS3Q9H6R3 686 aa22.67■■□□□ 1.22
SH2D3A-201ENST00000245908 SMYD3Q9H7B4 428 aa22.67■■□□□ 1.22
SH2D3A-201ENST00000245908 EDF1O60869 148 aaKnown RBP22.66■■□□□ 1.22
SH2D3A-201ENST00000245908 CILPO75339 1184 aa22.66■■□□□ 1.22
SH2D3A-201ENST00000245908 NEBLO76041 1014 aa22.66■■□□□ 1.22
SH2D3A-201ENST00000245908 MICAL2O94851 1124 aa22.66■■□□□ 1.22
SH2D3A-201ENST00000245908 MIPP30301 263 aa22.66■■□□□ 1.22
SH2D3A-201ENST00000245908 CLCN3P51790 818 aa22.66■■□□□ 1.22
SH2D3A-201ENST00000245908 ORC1Q13415 861 aa22.66■■□□□ 1.22
SH2D3A-201ENST00000245908 EFCAB12Q6NXP0 572 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms