RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.75■□□□□ 0.755e-12■■■■■ 31.3
TNFSF9-201ENST00000245817 TJP2Q9UDY2 1190 aa19.75■□□□□ 0.75
TNFSF9-201ENST00000245817 USTQ9Y2C2 406 aa19.75■□□□□ 0.75
TNFSF9-201ENST00000245817 E5RJQ4 531 aa19.74■□□□□ 0.75
TNFSF9-201ENST00000245817 TADA2AO75478 443 aa19.74■□□□□ 0.75
TNFSF9-201ENST00000245817 LRRC26Q2I0M4 334 aa19.74■□□□□ 0.75
TNFSF9-201ENST00000245817 PPP1R15BQ5SWA1 713 aa19.74■□□□□ 0.75
TNFSF9-201ENST00000245817 OVOS1Q6IE37 1185 aa19.74■□□□□ 0.75
TNFSF9-201ENST00000245817 PMF1Q6P1K2 205 aa19.74■□□□□ 0.75
TNFSF9-201ENST00000245817 ZDHHC17Q8IUH5 632 aa19.74■□□□□ 0.75
TNFSF9-201ENST00000245817 MCRS1Q96EZ8 462 aa19.74■□□□□ 0.75
TNFSF9-201ENST00000245817 CASD1Q96PB1 797 aa19.74■□□□□ 0.75
TNFSF9-201ENST00000245817 ACBD6Q9BR61 282 aa19.74■□□□□ 0.75
TNFSF9-201ENST00000245817 SLC4A5Q9BY07 1137 aa19.74■□□□□ 0.75
TNFSF9-201ENST00000245817 METTL5Q9NRN9 209 aaKnown RBP19.74■□□□□ 0.75
TNFSF9-201ENST00000245817 SMARCAL1Q9NZC9 954 aa19.74■□□□□ 0.75
TNFSF9-201ENST00000245817 EHD2Q9NZN4 543 aa19.74■□□□□ 0.75
TNFSF9-201ENST00000245817 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.73■□□□□ 0.75
TNFSF9-201ENST00000245817 TMEM189-UBE2V1I3L0A0 370 aa19.73■□□□□ 0.75
TNFSF9-201ENST00000245817 ALDH2P05091 517 aa19.73■□□□□ 0.75
TNFSF9-201ENST00000245817 TYMPP19971 482 aa19.73■□□□□ 0.75
TNFSF9-201ENST00000245817 C2orf54Q08AI8 447 aa19.73■□□□□ 0.75
TNFSF9-201ENST00000245817 TMEM110Q86TL2 294 aa19.73■□□□□ 0.75
TNFSF9-201ENST00000245817 RHOT1Q8IXI2 618 aa19.73■□□□□ 0.75
TNFSF9-201ENST00000245817 RASGEF1CQ8N431 466 aa19.73■□□□□ 0.75
TNFSF9-201ENST00000245817 KRT35Q92764 455 aa19.73■□□□□ 0.75
TNFSF9-201ENST00000245817 COLEC11Q9BWP8 271 aa19.73■□□□□ 0.75
TNFSF9-201ENST00000245817 DUSP16Q9BY84 665 aa19.73■□□□□ 0.75
TNFSF9-201ENST00000245817 CYLDQ9NQC7 956 aa19.73■□□□□ 0.75
TNFSF9-201ENST00000245817 PRDM5Q9NQX1 630 aaPredicted RBP19.73■□□□□ 0.75
TNFSF9-201ENST00000245817 PCDHB8Q9UN66 801 aa19.73■□□□□ 0.75
TNFSF9-201ENST00000245817 PRG3Q9Y2Y8 225 aaPredicted RBP19.73■□□□□ 0.75
TNFSF9-201ENST00000245817 TDRD15B5MCY1 1934 aaKnown RBP19.72■□□□□ 0.75
TNFSF9-201ENST00000245817 PIK3R2O00459 728 aa19.72■□□□□ 0.75
TNFSF9-201ENST00000245817 DESP17661 470 aa19.72■□□□□ 0.75
TNFSF9-201ENST00000245817 PSMA2P25787 234 aa19.72■□□□□ 0.75
TNFSF9-201ENST00000245817 PEX5P50542 639 aa19.72■□□□□ 0.75
TNFSF9-201ENST00000245817 PLCB3Q01970 1234 aa19.72■□□□□ 0.75
TNFSF9-201ENST00000245817 TCTN1Q2MV58 587 aa19.72■□□□□ 0.75
TNFSF9-201ENST00000245817 CD300LGQ6UXG3 332 aa19.72■□□□□ 0.75
TNFSF9-201ENST00000245817 ALG3Q92685 438 aa19.72■□□□□ 0.75
TNFSF9-201ENST00000245817 HSFY1Q96LI6 401 aa19.72■□□□□ 0.75
TNFSF9-201ENST00000245817 RNPC3Q96LT9 517 aaKnown RBP19.72■□□□□ 0.75
TNFSF9-201ENST00000245817 TBKBP1A7MCY6 615 aa19.71■□□□□ 0.75
TNFSF9-201ENST00000245817 TULP2O00295 520 aa19.71■□□□□ 0.75
TNFSF9-201ENST00000245817 XPO1O14980 1071 aaKnown RBP19.71■□□□□ 0.75
TNFSF9-201ENST00000245817 PSTPIP1O43586 416 aa19.71■□□□□ 0.75
TNFSF9-201ENST00000245817 ITGB1P05556 798 aa19.71■□□□□ 0.75
TNFSF9-201ENST00000245817 FAM200BP0CF97 657 aa19.71■□□□□ 0.75
TNFSF9-201ENST00000245817 NPR3P17342 541 aa19.71■□□□□ 0.75
TNFSF9-201ENST00000245817 RFC1P35251 1148 aaPredicted RBP19.71■□□□□ 0.75
TNFSF9-201ENST00000245817 TSPY1Q01534 308 aa19.71■□□□□ 0.75
TNFSF9-201ENST00000245817 YWHAHQ04917 246 aaPredicted RBP19.71■□□□□ 0.75
TNFSF9-201ENST00000245817 MAPRE1Q15691 268 aaKnown RBP19.71■□□□□ 0.75
TNFSF9-201ENST00000245817 LONRF2Q1L5Z9 754 aa19.71■□□□□ 0.75
TNFSF9-201ENST00000245817 FAM183BPQ6ZVS7 135 aa19.71■□□□□ 0.75
TNFSF9-201ENST00000245817 FUKQ8N0W3 1084 aa19.71■□□□□ 0.75
TNFSF9-201ENST00000245817 NOA1Q8NC60 698 aaKnown RBP19.71■□□□□ 0.75
TNFSF9-201ENST00000245817 MYCBPAPQ8TBZ2 947 aa19.71■□□□□ 0.75
TNFSF9-201ENST00000245817 FNIP1Q8TF40 1166 aa19.71■□□□□ 0.75
TNFSF9-201ENST00000245817 HTATIP2Q9BUP3 242 aa19.71■□□□□ 0.75
TNFSF9-201ENST00000245817 NRDE2Q9H7Z3 1164 aa19.71■□□□□ 0.75
TNFSF9-201ENST00000245817 CRTAC1Q9NQ79 661 aa19.71■□□□□ 0.75
TNFSF9-201ENST00000245817 DNAJB4Q9UDY4 337 aa19.71■□□□□ 0.75
TNFSF9-201ENST00000245817 TTC7AQ9ULT0 858 aaPredicted RBP19.71■□□□□ 0.75
TNFSF9-201ENST00000245817 CLDN5O00501 218 aa19.71■□□□□ 0.75
TNFSF9-201ENST00000245817 FGGP02679 453 aa19.71■□□□□ 0.75
TNFSF9-201ENST00000245817 RHOXF2BP0C7M4 288 aa19.71■□□□□ 0.75
TNFSF9-201ENST00000245817 TKTP29401 623 aaKnown RBP19.71■□□□□ 0.75
TNFSF9-201ENST00000245817 PLA2G4AP47712 749 aa19.71■□□□□ 0.75
TNFSF9-201ENST00000245817 ZNF211Q13398 564 aaPredicted RBP19.71■□□□□ 0.75
TNFSF9-201ENST00000245817 ODF2Q5BJF6 829 aa19.71■□□□□ 0.75
TNFSF9-201ENST00000245817 ZFYVE27Q5T4F4 411 aa19.71■□□□□ 0.75
TNFSF9-201ENST00000245817 KIAA0319Q5VV43 1072 aa19.71■□□□□ 0.75
TNFSF9-201ENST00000245817 CC2D1AQ6P1N0 951 aaPredicted RBP19.71■□□□□ 0.75
TNFSF9-201ENST00000245817 CPNE8Q86YQ8 564 aa19.71■□□□□ 0.75
TNFSF9-201ENST00000245817 MMGT1Q8N4V1 131 aa19.71■□□□□ 0.75
TNFSF9-201ENST00000245817 NIPA2Q8N8Q9 360 aa19.71■□□□□ 0.75
TNFSF9-201ENST00000245817 RHOXF2Q9BQY4 288 aa19.71■□□□□ 0.75
TNFSF9-201ENST00000245817 FAN1Q9Y2M0 1017 aa19.71■□□□□ 0.75
TNFSF9-201ENST00000245817 MYBPHLA2RUH7 354 aa19.7■□□□□ 0.74
TNFSF9-201ENST00000245817 KRIT1O00522 736 aa19.7■□□□□ 0.74
TNFSF9-201ENST00000245817 NRP1O14786 923 aa19.7■□□□□ 0.74
TNFSF9-201ENST00000245817 UPP2O95045 317 aa19.7■□□□□ 0.74
TNFSF9-201ENST00000245817 TIMP1P01033 207 aa19.7■□□□□ 0.74
TNFSF9-201ENST00000245817 LCP1P13796 627 aa19.7■□□□□ 0.74
TNFSF9-201ENST00000245817 RAG1P15918 1043 aa19.7■□□□□ 0.74
TNFSF9-201ENST00000245817 CETN2P41208 172 aa19.7■□□□□ 0.74
TNFSF9-201ENST00000245817 MARCKSL1P49006 195 aa19.7■□□□□ 0.74
TNFSF9-201ENST00000245817 GATMP50440 423 aa19.7■□□□□ 0.74
TNFSF9-201ENST00000245817 SLC6A3Q01959 620 aa19.7■□□□□ 0.74
TNFSF9-201ENST00000245817 DCAF12L1Q5VU92 463 aa19.7■□□□□ 0.74
TNFSF9-201ENST00000245817 SCUBE3Q8IX30 993 aa19.7■□□□□ 0.74
TNFSF9-201ENST00000245817 JOSD2Q8TAC2 188 aa19.7■□□□□ 0.74
TNFSF9-201ENST00000245817 PCED1BQ96HM7 432 aa19.7■□□□□ 0.74
TNFSF9-201ENST00000245817 B3GNT5Q9BYG0 378 aa19.7■□□□□ 0.74
TNFSF9-201ENST00000245817 KRT82Q9NSB4 513 aa19.7■□□□□ 0.74
TNFSF9-201ENST00000245817 ASNSD1Q9NWL6 643 aa19.7■□□□□ 0.74
TNFSF9-201ENST00000245817 GOLGA6L10A0A0M3HER8 536 aa19.69■□□□□ 0.74
TNFSF9-201ENST00000245817 F8VP50 259 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms