RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 HOXA2O43364 376 aa17.93■□□□□ 0.46
CDKN1A-201ENST00000244741 HCRTO43612 131 aa17.93■□□□□ 0.46
CDKN1A-201ENST00000244741 TAF6P49848 677 aa17.93■□□□□ 0.46
CDKN1A-201ENST00000244741 BCAR1P56945 870 aa17.93■□□□□ 0.46
CDKN1A-201ENST00000244741 DSC1Q08554 894 aa17.93■□□□□ 0.46
CDKN1A-201ENST00000244741 SKIDA1Q1XH10 827 aa17.93■□□□□ 0.46
CDKN1A-201ENST00000244741 ADAT2Q7Z6V5 191 aaKnown RBP17.93■□□□□ 0.46
CDKN1A-201ENST00000244741 SRLQ86TD4 932 aa17.93■□□□□ 0.46
CDKN1A-201ENST00000244741 TSPAN18Q96SJ8 248 aa17.93■□□□□ 0.46
CDKN1A-201ENST00000244741 YME1L1Q96TA2 773 aa17.93■□□□□ 0.46
CDKN1A-201ENST00000244741 ZBED2Q9BTP6 218 aa17.93■□□□□ 0.46
CDKN1A-201ENST00000244741 RRP15Q9Y3B9 282 aaKnown RBP17.93■□□□□ 0.46
CDKN1A-201ENST00000244741 CHD9Q3L8U1 2897 aa17.93■□□□□ 0.46
CDKN1A-201ENST00000244741 CYP26A1O43174 497 aa17.93■□□□□ 0.46
CDKN1A-201ENST00000244741 EFCAB14O75071 495 aa17.93■□□□□ 0.46
CDKN1A-201ENST00000244741 ATICP31939 592 aa17.93■□□□□ 0.46
CDKN1A-201ENST00000244741 GPC5P78333 572 aa17.93■□□□□ 0.46
CDKN1A-201ENST00000244741 GCNT1Q02742 428 aa17.93■□□□□ 0.46
CDKN1A-201ENST00000244741 LRRC52Q8N7C0 313 aa17.93■□□□□ 0.46
CDKN1A-201ENST00000244741 EPS8L1Q8TE68 723 aa17.93■□□□□ 0.46
CDKN1A-201ENST00000244741 SEC14L1Q92503 715 aa17.93■□□□□ 0.46
CDKN1A-201ENST00000244741 SLC4A7Q9Y6M7 1214 aa17.93■□□□□ 0.46
CDKN1A-201ENST00000244741 EIF3HO15372 352 aaKnown RBP eCLIP17.92■□□□□ 0.46
CDKN1A-201ENST00000244741 RTN2O75298 545 aa17.92■□□□□ 0.46
CDKN1A-201ENST00000244741 TCEAL1Q15170 157 aa17.92■□□□□ 0.46
CDKN1A-201ENST00000244741 SPOUT1Q5T280 376 aaKnown RBP17.92■□□□□ 0.46
CDKN1A-201ENST00000244741 AADACL2Q6P093 401 aa17.92■□□□□ 0.46
CDKN1A-201ENST00000244741 TMEM270Q6UE05 265 aa17.92■□□□□ 0.46
CDKN1A-201ENST00000244741 CD300LGQ6UXG3 332 aa17.92■□□□□ 0.46
CDKN1A-201ENST00000244741 SLC47A2Q86VL8 602 aa17.92■□□□□ 0.46
CDKN1A-201ENST00000244741 TMEM173Q86WV6 379 aaPredicted RBP17.92■□□□□ 0.46
CDKN1A-201ENST00000244741 ZNF560Q96MR9 790 aa17.92■□□□□ 0.46
CDKN1A-201ENST00000244741 MRPL45Q9BRJ2 306 aaKnown RBP17.92■□□□□ 0.46
CDKN1A-201ENST00000244741 CISHQ9NSE2 258 aa17.92■□□□□ 0.46
CDKN1A-201ENST00000244741 HMGXB4Q9UGU5 601 aa17.92■□□□□ 0.46
CDKN1A-201ENST00000244741 PCDHB4Q9Y5E5 795 aa17.92■□□□□ 0.46
CDKN1A-201ENST00000244741 TMEM110-MUSTN1A8MSY1 372 aa17.91■□□□□ 0.46
CDKN1A-201ENST00000244741 H0YGN5 161 aa17.91■□□□□ 0.46
CDKN1A-201ENST00000244741 NRP1O14786 923 aa17.91■□□□□ 0.46
CDKN1A-201ENST00000244741 RPL9P32969 192 aaKnown RBP17.91■□□□□ 0.46
CDKN1A-201ENST00000244741 SLC11A1P49279 550 aa17.91■□□□□ 0.46
CDKN1A-201ENST00000244741 ATP1A2P50993 1020 aa17.91■□□□□ 0.46
CDKN1A-201ENST00000244741 BTG3Q14201 252 aaPredicted RBP17.91■□□□□ 0.46
CDKN1A-201ENST00000244741 SOWAHAQ2M3V2 549 aa17.91■□□□□ 0.46
CDKN1A-201ENST00000244741 TIGD5Q53EQ6 642 aa17.91■□□□□ 0.46
CDKN1A-201ENST00000244741 CEP85LQ5SZL2 805 aa17.91■□□□□ 0.46
CDKN1A-201ENST00000244741 LRRC43Q8N309 656 aa17.91■□□□□ 0.46
CDKN1A-201ENST00000244741 KRT35Q92764 455 aa17.91■□□□□ 0.46
CDKN1A-201ENST00000244741 TRIM51Q9BSJ1 452 aa17.91■□□□□ 0.46
CDKN1A-201ENST00000244741 DPH5Q9H2P9 285 aa17.91■□□□□ 0.46
CDKN1A-201ENST00000244741 RABEP2Q9H5N1 569 aa17.91■□□□□ 0.46
CDKN1A-201ENST00000244741 NFS1Q9Y697 457 aa17.91■□□□□ 0.46
CDKN1A-201ENST00000244741 PDE4DIPQ5VU43 2346 aa17.91■□□□□ 0.46
CDKN1A-201ENST00000244741 GRXCR1A8MXD5 290 aa17.91■□□□□ 0.46
CDKN1A-201ENST00000244741 ACO1P21399 889 aaKnown RBP17.91■□□□□ 0.46
CDKN1A-201ENST00000244741 SSTR3P32745 418 aaPredicted RBP17.91■□□□□ 0.46
CDKN1A-201ENST00000244741 RABGGTBP53611 331 aa17.91■□□□□ 0.46
CDKN1A-201ENST00000244741 SV2CQ496J9 727 aa17.91■□□□□ 0.46
CDKN1A-201ENST00000244741 FAM109BQ6ICB4 259 aaPredicted RBP17.91■□□□□ 0.46
CDKN1A-201ENST00000244741 C11orf63Q6NUN7 778 aa17.91■□□□□ 0.46
CDKN1A-201ENST00000244741 DSTYKQ6XUX3 929 aa17.91■□□□□ 0.46
CDKN1A-201ENST00000244741 OR2W6PQ8NHA6 318 aa17.91■□□□□ 0.46
CDKN1A-201ENST00000244741 HERVK_113Q902F9 699 aa17.91■□□□□ 0.46
CDKN1A-201ENST00000244741 SHC3Q92529 594 aa17.91■□□□□ 0.46
CDKN1A-201ENST00000244741 LRRC45Q96CN5 670 aa17.91■□□□□ 0.46
CDKN1A-201ENST00000244741 ZNF689Q96CS4 500 aaPredicted RBP17.91■□□□□ 0.46
CDKN1A-201ENST00000244741 ATP6V1G3Q96LB4 118 aa17.91■□□□□ 0.46
CDKN1A-201ENST00000244741 COL4A6Q14031 1691 aa17.91■□□□□ 0.46
CDKN1A-201ENST00000244741 MYO1CO00159 1063 aa17.9■□□□□ 0.46
CDKN1A-201ENST00000244741 CYB561D2O14569 222 aa17.9■□□□□ 0.46
CDKN1A-201ENST00000244741 GJB5O95377 273 aa17.9■□□□□ 0.46
CDKN1A-201ENST00000244741 MMEP08473 750 aa17.9■□□□□ 0.46
CDKN1A-201ENST00000244741 ATP2A2P16615 1042 aaKnown RBP17.9■□□□□ 0.46
CDKN1A-201ENST00000244741 TBXAS1P24557 533 aaPredicted RBP17.9■□□□□ 0.46
CDKN1A-201ENST00000244741 MARCKSL1P49006 195 aa17.9■□□□□ 0.46
CDKN1A-201ENST00000244741 PDCLQ13371 301 aa17.9■□□□□ 0.46
CDKN1A-201ENST00000244741 SHHQ15465 462 aa17.9■□□□□ 0.46
CDKN1A-201ENST00000244741 LRIG3Q6UXM1 1119 aa17.9■□□□□ 0.46
CDKN1A-201ENST00000244741 KDM7AQ6ZMT4 941 aa17.9■□□□□ 0.46
CDKN1A-201ENST00000244741 C1orf131Q8NDD1 294 aaKnown RBP17.9■□□□□ 0.46
CDKN1A-201ENST00000244741 B3GALT6Q96L58 329 aa17.9■□□□□ 0.46
CDKN1A-201ENST00000244741 SENP8Q96LD8 212 aa17.9■□□□□ 0.46
CDKN1A-201ENST00000244741 MRPL9Q9BYD2 267 aaKnown RBP17.9■□□□□ 0.46
CDKN1A-201ENST00000244741 VRTNQ9H8Y1 702 aa17.9■□□□□ 0.46
CDKN1A-201ENST00000244741 UTP11Q9Y3A2 253 aaKnown RBP17.9■□□□□ 0.46
CDKN1A-201ENST00000244741 MRPL42Q9Y6G3 142 aaKnown RBP17.9■□□□□ 0.46
CDKN1A-201ENST00000244741 ATMINO43313 823 aaPredicted RBP17.9■□□□□ 0.46
CDKN1A-201ENST00000244741 ALDH2P05091 517 aa17.9■□□□□ 0.46
CDKN1A-201ENST00000244741 PNPLA4P41247 253 aa17.9■□□□□ 0.46
CDKN1A-201ENST00000244741 FMO1Q01740 532 aa17.9■□□□□ 0.46
CDKN1A-201ENST00000244741 DDX27Q96GQ7 796 aaKnown RBP17.9■□□□□ 0.46
CDKN1A-201ENST00000244741 TWNKQ96RR1 684 aa17.9■□□□□ 0.46
CDKN1A-201ENST00000244741 NAP1L3Q99457 506 aaPredicted RBP17.9■□□□□ 0.46
CDKN1A-201ENST00000244741 LPIN3Q9BQK8 851 aa17.9■□□□□ 0.46
CDKN1A-201ENST00000244741 BCO2Q9BYV7 579 aa17.9■□□□□ 0.46
CDKN1A-201ENST00000244741 TRIM31Q9BZY9 425 aa17.9■□□□□ 0.46
CDKN1A-201ENST00000244741 CWH43Q9H720 699 aa17.9■□□□□ 0.46
CDKN1A-201ENST00000244741 RC3H2Q9HBD1 1191 aaKnown RBP17.9■□□□□ 0.46
CDKN1A-201ENST00000244741 TMBIM4Q9HC24 238 aa17.9■□□□□ 0.46
CDKN1A-201ENST00000244741 LCHNA4D1U4 455 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms