RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 GH2P01242 217 aa14.36□□□□□ -0.11
TARDBP-201ENST00000240185 FASP25445 335 aa14.36□□□□□ -0.11
TARDBP-201ENST00000240185 FEN1P39748 380 aaKnown RBP14.36□□□□□ -0.11
TARDBP-201ENST00000240185 PDK1Q15118 436 aa14.36□□□□□ -0.11
TARDBP-201ENST00000240185 TSHZ1Q6ZSZ6 1077 aa14.36□□□□□ -0.11
TARDBP-201ENST00000240185 IKBIPQ70UQ0 350 aa14.36□□□□□ -0.11
TARDBP-201ENST00000240185 GIMAP8Q8ND71 665 aaPredicted RBP14.36□□□□□ -0.11
TARDBP-201ENST00000240185 A0A1W2PQJ5 194 aa14.36□□□□□ -0.11
TARDBP-201ENST00000240185 FAM20BO75063 409 aa14.36□□□□□ -0.11
TARDBP-201ENST00000240185 ZNF682O95780 498 aa14.36□□□□□ -0.11
TARDBP-201ENST00000240185 PKN2Q16513 984 aaKnown RBP14.36□□□□□ -0.11
TARDBP-201ENST00000240185 AKIRIN2Q53H80 203 aa14.36□□□□□ -0.11
TARDBP-201ENST00000240185 SLC13A5Q86YT5 568 aaPredicted RBP14.36□□□□□ -0.11
TARDBP-201ENST00000240185 ZNF341Q9BYN7 854 aa14.36□□□□□ -0.11
TARDBP-201ENST00000240185 UBXN6Q9BZV1 441 aa14.36□□□□□ -0.11
TARDBP-201ENST00000240185 CYP39A1Q9NYL5 469 aa14.36□□□□□ -0.11
TARDBP-201ENST00000240185 EEF2KO00418 725 aaKnown RBP14.36□□□□□ -0.11
TARDBP-201ENST00000240185 EYA4O95677 639 aa14.36□□□□□ -0.11
TARDBP-201ENST00000240185 PCNX4Q63HM2 1172 aa14.36□□□□□ -0.11
TARDBP-201ENST00000240185 LRRC74BQ6ZQY2 392 aa14.36□□□□□ -0.11
TARDBP-201ENST00000240185 SVOPQ8N4V2 548 aa14.36□□□□□ -0.11
TARDBP-201ENST00000240185 RGS18Q9NS28 235 aa14.36□□□□□ -0.11
TARDBP-201ENST00000240185 C2CD2Q9Y426 696 aa14.36□□□□□ -0.11
TARDBP-201ENST00000240185 ADGRL2O95490 1459 aa14.36□□□□□ -0.11
TARDBP-201ENST00000240185 TNPO2O14787 897 aaKnown RBP14.36□□□□□ -0.11
TARDBP-201ENST00000240185 NPM3O75607 178 aaKnown RBP14.36□□□□□ -0.11
TARDBP-201ENST00000240185 RGS2P41220 211 aa14.36□□□□□ -0.11
TARDBP-201ENST00000240185 TRAF3Q13114 568 aa14.36□□□□□ -0.11
TARDBP-201ENST00000240185 SMTNL2Q2TAL5 461 aa14.36□□□□□ -0.11
TARDBP-201ENST00000240185 TRAPPC11Q7Z392 1133 aa14.36□□□□□ -0.11
TARDBP-201ENST00000240185 DYRK4Q9NR20 520 aa14.36□□□□□ -0.11
TARDBP-201ENST00000240185 FBXO40Q9UH90 709 aa14.36□□□□□ -0.11
TARDBP-201ENST00000240185 GMEB1Q9Y692 573 aa14.36□□□□□ -0.11
TARDBP-201ENST00000240185 NPHP3-ACAD11A0A0J9YXS1 232 aa14.35□□□□□ -0.11
TARDBP-201ENST00000240185 SMIM31A0A1B0GVY4 71 aa14.35□□□□□ -0.11
TARDBP-201ENST00000240185 MTRF1O75570 445 aaKnown RBP14.35□□□□□ -0.11
TARDBP-201ENST00000240185 RHOBTB3O94955 611 aa14.35□□□□□ -0.11
TARDBP-201ENST00000240185 KRT6AP02538 564 aa14.35□□□□□ -0.11
TARDBP-201ENST00000240185 MAPK10P53779 464 aa14.35□□□□□ -0.11
TARDBP-201ENST00000240185 SUPT20HL1Q3ZLR7 823 aa14.35□□□□□ -0.11
TARDBP-201ENST00000240185 ATP6AP1LQ52LC2 224 aa14.35□□□□□ -0.11
TARDBP-201ENST00000240185 KCNT1Q5JUK3 1230 aa14.35□□□□□ -0.11
TARDBP-201ENST00000240185 ELMSAN1Q6PJG2 1045 aa14.35□□□□□ -0.11
TARDBP-201ENST00000240185 TMPRSS6Q8IU80 811 aa14.35□□□□□ -0.11
TARDBP-201ENST00000240185 ZNF560Q96MR9 790 aa14.35□□□□□ -0.11
TARDBP-201ENST00000240185 APOL4Q9BPW4 351 aa14.35□□□□□ -0.11
TARDBP-201ENST00000240185 MTA3Q9BTC8 594 aa14.35□□□□□ -0.11
TARDBP-201ENST00000240185 CCSER1Q9C0I3 900 aa14.35□□□□□ -0.11
TARDBP-201ENST00000240185 TMEM51Q9NW97 253 aa14.35□□□□□ -0.11
TARDBP-201ENST00000240185 TBX22Q9Y458 520 aa14.35□□□□□ -0.11
TARDBP-201ENST00000240185 PZPP20742 1482 aa14.35□□□□□ -0.11
TARDBP-201ENST00000240185 H2AFYO75367 372 aaKnown RBP14.35□□□□□ -0.11
TARDBP-201ENST00000240185 LCA5LO95447 670 aa14.35□□□□□ -0.11
TARDBP-201ENST00000240185 RARGP13631 454 aa14.35□□□□□ -0.11
TARDBP-201ENST00000240185 OTUD3Q5T2D3 398 aaPredicted RBP14.35□□□□□ -0.11
TARDBP-201ENST00000240185 AGAP9Q5VTM2 703 aa14.35□□□□□ -0.11
TARDBP-201ENST00000240185 C4orf22Q6V702 233 aa14.35□□□□□ -0.11
TARDBP-201ENST00000240185 USP13Q92995 863 aaPredicted RBP14.35□□□□□ -0.11
TARDBP-201ENST00000240185 ZNF333Q96JL9 665 aa14.35□□□□□ -0.11
TARDBP-201ENST00000240185 IARS2Q9NSE4 1012 aaKnown RBP14.35□□□□□ -0.11
TARDBP-201ENST00000240185 TUBE1Q9UJT0 475 aa14.35□□□□□ -0.11
TARDBP-201ENST00000240185 BTBD3Q9Y2F9 522 aa14.35□□□□□ -0.11
TARDBP-201ENST00000240185 ZBTB1Q9Y2K1 713 aa14.35□□□□□ -0.11
TARDBP-201ENST00000240185 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.35□□□□□ -0.11
TARDBP-201ENST00000240185 EPB42P16452 691 aa14.35□□□□□ -0.11
TARDBP-201ENST00000240185 GRM4Q14833 912 aa14.35□□□□□ -0.11
TARDBP-201ENST00000240185 ATAD3BQ5T9A4 648 aa14.35□□□□□ -0.11
TARDBP-201ENST00000240185 SLC44A2Q8IWA5 706 aaPredicted RBP14.35□□□□□ -0.11
TARDBP-201ENST00000240185 CNPY3Q9BT09 278 aa14.35□□□□□ -0.11
TARDBP-201ENST00000240185 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.35□□□□□ -0.11
TARDBP-201ENST00000240185 UBA2Q9UBT2 640 aaPredicted RBP14.35□□□□□ -0.11
TARDBP-201ENST00000240185 NR5A2O00482 541 aa14.35□□□□□ -0.11
TARDBP-201ENST00000240185 ABCB1P08183 1280 aaPredicted RBP14.35□□□□□ -0.11
TARDBP-201ENST00000240185 GSTM1P09488 218 aa14.35□□□□□ -0.11
TARDBP-201ENST00000240185 CCT8P50990 548 aa14.35□□□□□ -0.11
TARDBP-201ENST00000240185 NCKAP1LP55160 1127 aa14.35□□□□□ -0.11
TARDBP-201ENST00000240185 STK4Q13043 487 aa14.35□□□□□ -0.11
TARDBP-201ENST00000240185 DPY19L2Q6NUT2 758 aa14.35□□□□□ -0.11
TARDBP-201ENST00000240185 KRT74Q7RTS7 529 aa14.35□□□□□ -0.11
TARDBP-201ENST00000240185 POLR1BQ9H9Y6 1135 aa14.35□□□□□ -0.11
TARDBP-201ENST00000240185 VAC14Q08AM6 782 aa14.34□□□□□ -0.11
TARDBP-201ENST00000240185 GALNTL6Q49A17 601 aa14.34□□□□□ -0.11
TARDBP-201ENST00000240185 PDPK2PQ6A1A2 396 aa14.34□□□□□ -0.11
TARDBP-201ENST00000240185 NAPEPLDQ6IQ20 393 aa14.34□□□□□ -0.11
TARDBP-201ENST00000240185 B3GNT6Q6ZMB0 384 aa14.34□□□□□ -0.11
TARDBP-201ENST00000240185 ZNF467Q7Z7K2 595 aaPredicted RBP14.34□□□□□ -0.11
TARDBP-201ENST00000240185 LRRC49Q8IUZ0 686 aa14.34□□□□□ -0.11
TARDBP-201ENST00000240185 UNC45BQ8IWX7 931 aa14.34□□□□□ -0.11
TARDBP-201ENST00000240185 ELMOD1Q8N336 334 aa14.34□□□□□ -0.11
TARDBP-201ENST00000240185 UTP15Q8TED0 518 aaKnown RBP14.34□□□□□ -0.11
TARDBP-201ENST00000240185 KCTD10Q9H3F6 313 aa14.34□□□□□ -0.11
TARDBP-201ENST00000240185 RMND5AQ9H871 391 aa14.34□□□□□ -0.11
TARDBP-201ENST00000240185 DPYSL4O14531 572 aa14.34□□□□□ -0.11
TARDBP-201ENST00000240185 GRAP2O75791 330 aa14.34□□□□□ -0.11
TARDBP-201ENST00000240185 IL6STP40189 918 aaPredicted RBP14.34□□□□□ -0.11
TARDBP-201ENST00000240185 KLK7P49862 253 aa14.34□□□□□ -0.11
TARDBP-201ENST00000240185 STILQ15468 1287 aa14.34□□□□□ -0.11
TARDBP-201ENST00000240185 DDR2Q16832 855 aa14.34□□□□□ -0.11
TARDBP-201ENST00000240185 RGS21Q2M5E4 152 aa14.34□□□□□ -0.11
TARDBP-201ENST00000240185 KDM6BO15054 1643 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms