RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 PCED1BQ96HM7 432 aa11.74□□□□□ -0.53
TNFAIP3-201ENST00000237289 LMAN2LQ9H0V9 348 aa11.74□□□□□ -0.53
TNFAIP3-201ENST00000237289 PAXBP1Q9Y5B6 917 aa11.74□□□□□ -0.53
TNFAIP3-201ENST00000237289 PCDHA13Q9Y5I0 950 aa11.74□□□□□ -0.53
TNFAIP3-201ENST00000237289 NOL4O94818 638 aa11.74□□□□□ -0.53
TNFAIP3-201ENST00000237289 CYP2F1P24903 491 aa11.74□□□□□ -0.53
TNFAIP3-201ENST00000237289 YWHAQP27348 245 aa11.74□□□□□ -0.53
TNFAIP3-201ENST00000237289 HADHQ16836 314 aaKnown RBP11.74□□□□□ -0.53
TNFAIP3-201ENST00000237289 EFHC1Q5JVL4 640 aa11.74□□□□□ -0.53
TNFAIP3-201ENST00000237289 NOP9Q86U38 636 aaKnown RBP11.74□□□□□ -0.53
TNFAIP3-201ENST00000237289 SLC4A11Q8NBS3 891 aa11.74□□□□□ -0.53
TNFAIP3-201ENST00000237289 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.74□□□□□ -0.53
TNFAIP3-201ENST00000237289 SECISBP2LQ93073 1101 aaKnown RBP11.74□□□□□ -0.53
TNFAIP3-201ENST00000237289 FBXO21O94952 628 aa11.73□□□□□ -0.53
TNFAIP3-201ENST00000237289 CALCAP01258 141 aa11.73□□□□□ -0.53
TNFAIP3-201ENST00000237289 SDC4P31431 198 aa11.73□□□□□ -0.53
TNFAIP3-201ENST00000237289 PTPN14Q15678 1187 aa11.73□□□□□ -0.53
TNFAIP3-201ENST00000237289 DDR2Q16832 855 aa11.73□□□□□ -0.53
TNFAIP3-201ENST00000237289 OSTM1Q86WC4 334 aa11.73□□□□□ -0.53
TNFAIP3-201ENST00000237289 CRYBG2Q8N1P7 616 aa11.73□□□□□ -0.53
TNFAIP3-201ENST00000237289 PAF1Q8N7H5 531 aa11.73□□□□□ -0.53
TNFAIP3-201ENST00000237289 ZNF461Q8TAF7 563 aa11.73□□□□□ -0.53
TNFAIP3-201ENST00000237289 EPS8L1Q8TE68 723 aa11.73□□□□□ -0.53
TNFAIP3-201ENST00000237289 ZNF689Q96CS4 500 aaPredicted RBP11.73□□□□□ -0.53
TNFAIP3-201ENST00000237289 FUBP3Q96I24 572 aaKnown RBP eCLIP11.73□□□□□ -0.53
TNFAIP3-201ENST00000237289 DUSP16Q9BY84 665 aa11.73□□□□□ -0.53
TNFAIP3-201ENST00000237289 SIX2Q9NPC8 291 aa11.73□□□□□ -0.53
TNFAIP3-201ENST00000237289 PER2O15055 1255 aa11.73□□□□□ -0.53
TNFAIP3-201ENST00000237289 NEBLO76041 1014 aa11.73□□□□□ -0.53
TNFAIP3-201ENST00000237289 KRT3P12035 628 aa11.73□□□□□ -0.53
TNFAIP3-201ENST00000237289 NRIP1P48552 1158 aa11.73□□□□□ -0.53
TNFAIP3-201ENST00000237289 ROR1Q01973 937 aa11.73□□□□□ -0.53
TNFAIP3-201ENST00000237289 DSG1Q02413 1049 aa11.73□□□□□ -0.53
TNFAIP3-201ENST00000237289 GPR17Q13304 367 aa11.73□□□□□ -0.53
TNFAIP3-201ENST00000237289 PRPF38BQ5VTL8 546 aaKnown RBP11.73□□□□□ -0.53
TNFAIP3-201ENST00000237289 SLC7A14Q8TBB6 771 aa11.73□□□□□ -0.53
TNFAIP3-201ENST00000237289 PPP1R9BQ96SB3 815 aa11.73□□□□□ -0.53
TNFAIP3-201ENST00000237289 PARVAQ9NVD7 372 aa11.73□□□□□ -0.53
TNFAIP3-201ENST00000237289 LZTS1Q9Y250 596 aa11.73□□□□□ -0.53
TNFAIP3-201ENST00000237289 BACE2Q9Y5Z0 518 aa11.73□□□□□ -0.53
TNFAIP3-201ENST00000237289 INPPL1O15357 1258 aa11.73□□□□□ -0.53
TNFAIP3-201ENST00000237289 OAZ2O95190 189 aa11.73□□□□□ -0.53
TNFAIP3-201ENST00000237289 CLCN1P35523 988 aa11.73□□□□□ -0.53
TNFAIP3-201ENST00000237289 PBX1P40424 430 aa11.73□□□□□ -0.53
TNFAIP3-201ENST00000237289 GNG11P61952 73 aa11.73□□□□□ -0.53
TNFAIP3-201ENST00000237289 CDK17Q00537 523 aa11.73□□□□□ -0.53
TNFAIP3-201ENST00000237289 ACAD10Q6JQN1 1059 aa11.73□□□□□ -0.53
TNFAIP3-201ENST00000237289 RHOT2Q8IXI1 618 aa11.73□□□□□ -0.53
TNFAIP3-201ENST00000237289 SYCE1Q8N0S2 351 aa11.73□□□□□ -0.53
TNFAIP3-201ENST00000237289 LMO3Q8TAP4 145 aa11.73□□□□□ -0.53
TNFAIP3-201ENST00000237289 BAP1Q92560 729 aa11.73□□□□□ -0.53
TNFAIP3-201ENST00000237289 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.73□□□□□ -0.53
TNFAIP3-201ENST00000237289 CEP350Q5VT06 3117 aa11.73□□□□□ -0.53
TNFAIP3-201ENST00000237289 DAPK3O43293 454 aa11.72□□□□□ -0.53
TNFAIP3-201ENST00000237289 C8AP07357 584 aa11.72□□□□□ -0.53
TNFAIP3-201ENST00000237289 FGFR3P22607 806 aa11.72□□□□□ -0.53
TNFAIP3-201ENST00000237289 SMAD3P84022 425 aaKnown RBP11.72□□□□□ -0.53
TNFAIP3-201ENST00000237289 MESDQ14696 234 aa11.72□□□□□ -0.53
TNFAIP3-201ENST00000237289 PABPC1LQ4VXU2 614 aaKnown RBP11.72□□□□□ -0.53
TNFAIP3-201ENST00000237289 FAM109BQ6ICB4 259 aaPredicted RBP11.72□□□□□ -0.53
TNFAIP3-201ENST00000237289 PDZD4Q76G19 769 aaPredicted RBP11.72□□□□□ -0.53
TNFAIP3-201ENST00000237289 ZNF571Q7Z3V5 609 aaPredicted RBP11.72□□□□□ -0.53
TNFAIP3-201ENST00000237289 NUP93Q8N1F7 819 aa11.72□□□□□ -0.53
TNFAIP3-201ENST00000237289 ACRBPQ8NEB7 543 aa11.72□□□□□ -0.53
TNFAIP3-201ENST00000237289 HNRNPABQ99729 332 aaKnown RBP11.72□□□□□ -0.53
TNFAIP3-201ENST00000237289 PRDM12Q9H4Q4 367 aa11.72□□□□□ -0.53
TNFAIP3-201ENST00000237289 FAM204AQ9H8W3 233 aa11.72□□□□□ -0.53
TNFAIP3-201ENST00000237289 ASAH2Q9NR71 780 aa11.72□□□□□ -0.53
TNFAIP3-201ENST00000237289 STIM2Q9P246 746 aa11.72□□□□□ -0.53
TNFAIP3-201ENST00000237289 MTRRQ9UBK8 725 aa11.72□□□□□ -0.53
TNFAIP3-201ENST00000237289 CYP11A1P05108 521 aa11.72□□□□□ -0.53
TNFAIP3-201ENST00000237289 GZMAP12544 262 aa11.72□□□□□ -0.53
TNFAIP3-201ENST00000237289 ERVK-21P61565 698 aa11.72□□□□□ -0.53
TNFAIP3-201ENST00000237289 INCA1Q0VD86 236 aa11.72□□□□□ -0.53
TNFAIP3-201ENST00000237289 CDO1Q16878 200 aa11.72□□□□□ -0.53
TNFAIP3-201ENST00000237289 LCLAT1Q6UWP7 414 aa11.72□□□□□ -0.53
TNFAIP3-201ENST00000237289 PIGZQ86VD9 579 aa11.72□□□□□ -0.53
TNFAIP3-201ENST00000237289 HSFY1Q96LI6 401 aa11.72□□□□□ -0.53
TNFAIP3-201ENST00000237289 CORO1BQ9BR76 489 aa11.72□□□□□ -0.53
TNFAIP3-201ENST00000237289 APOL5Q9BWW9 433 aa11.72□□□□□ -0.53
TNFAIP3-201ENST00000237289 SDCBP2Q9H190 292 aa11.72□□□□□ -0.53
TNFAIP3-201ENST00000237289 ATXN3LQ9H3M9 355 aa11.72□□□□□ -0.53
TNFAIP3-201ENST00000237289 MARCH5Q9NX47 278 aa11.72□□□□□ -0.53
TNFAIP3-201ENST00000237289 GRM6O15303 877 aa11.72□□□□□ -0.53
TNFAIP3-201ENST00000237289 PLEKP08567 350 aaPredicted RBP11.72□□□□□ -0.53
TNFAIP3-201ENST00000237289 PSMA2P25787 234 aa11.72□□□□□ -0.53
TNFAIP3-201ENST00000237289 CTNNA2P26232 953 aa11.72□□□□□ -0.53
TNFAIP3-201ENST00000237289 BMP8BP34820 402 aa11.72□□□□□ -0.53
TNFAIP3-201ENST00000237289 TAP1Q03518 808 aa11.72□□□□□ -0.53
TNFAIP3-201ENST00000237289 ADIGQ0VDE8 80 aa11.72□□□□□ -0.53
TNFAIP3-201ENST00000237289 SDHAF4Q5VUM1 108 aa11.72□□□□□ -0.53
TNFAIP3-201ENST00000237289 DENND1BQ6P3S1 775 aa11.72□□□□□ -0.53
TNFAIP3-201ENST00000237289 DAAM2Q86T65 1068 aa11.72□□□□□ -0.53
TNFAIP3-201ENST00000237289 ZNF354CQ86Y25 554 aa11.72□□□□□ -0.53
TNFAIP3-201ENST00000237289 TLR8Q9NR97 1041 aaKnown RBP11.72□□□□□ -0.53
TNFAIP3-201ENST00000237289 HMGXB4Q9UGU5 601 aa11.72□□□□□ -0.53
TNFAIP3-201ENST00000237289 EIF3CLB5ME19 914 aaKnown RBP11.72□□□□□ -0.53
TNFAIP3-201ENST00000237289 O00370 1275 aa11.72□□□□□ -0.53
TNFAIP3-201ENST00000237289 TEX28O15482 410 aa11.72□□□□□ -0.53
TNFAIP3-201ENST00000237289 BUB1O43683 1085 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms