RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 PABPC1LQ4VXU2 614 aaKnown RBP12.01□□□□□ -0.49
SF3B6-201ENST00000233468 SCARA3Q6AZY7 606 aa12.01□□□□□ -0.49
SF3B6-201ENST00000233468 SPOPLQ6IQ16 392 aa12.01□□□□□ -0.49
SF3B6-201ENST00000233468 VSTM1Q6UX27 236 aa12.01□□□□□ -0.49
SF3B6-201ENST00000233468 TDRD5Q8NAT2 981 aaKnown RBP12.01□□□□□ -0.49
SF3B6-201ENST00000233468 B3GALNT2Q8NCR0 500 aa12.01□□□□□ -0.49
SF3B6-201ENST00000233468 TMEM209Q96SK2 561 aa12.01□□□□□ -0.49
SF3B6-201ENST00000233468 KCNK17Q96T54 332 aa12.01□□□□□ -0.49
SF3B6-201ENST00000233468 PRRX2Q99811 253 aa12.01□□□□□ -0.49
SF3B6-201ENST00000233468 NT5C1AQ9BXI3 368 aa12.01□□□□□ -0.49
SF3B6-201ENST00000233468 ELOVL4Q9GZR5 314 aa12.01□□□□□ -0.49
SF3B6-201ENST00000233468 AVENQ9NQS1 362 aaPredicted RBP12.01□□□□□ -0.49
SF3B6-201ENST00000233468 ASAH2Q9NR71 780 aa12.01□□□□□ -0.49
SF3B6-201ENST00000233468 GTF3C4Q9UKN8 822 aa12.01□□□□□ -0.49
SF3B6-201ENST00000233468 SLC27A5Q9Y2P5 690 aa12.01□□□□□ -0.49
SF3B6-201ENST00000233468 CLUHO75153 1309 aa12.01□□□□□ -0.49
SF3B6-201ENST00000233468 DCHS1Q96JQ0 3298 aa12.01□□□□□ -0.49
SF3B6-201ENST00000233468 MTCL1Q9Y4B5 1905 aaKnown RBP12□□□□□ -0.49
SF3B6-201ENST00000233468 DOCK8Q8NF50 2099 aa12□□□□□ -0.49
SF3B6-201ENST00000233468 MYBPHLA2RUH7 354 aa12□□□□□ -0.49
SF3B6-201ENST00000233468 GTPBP10A4D1E9 387 aaKnown RBP12□□□□□ -0.49
SF3B6-201ENST00000233468 KCNJ18B7U540 433 aa12□□□□□ -0.49
SF3B6-201ENST00000233468 PES1O00541 588 aaKnown RBP12□□□□□ -0.49
SF3B6-201ENST00000233468 TRIM66O15016 1216 aa12□□□□□ -0.49
SF3B6-201ENST00000233468 GFRA3O60609 400 aa12□□□□□ -0.49
SF3B6-201ENST00000233468 MICAL2O94851 1124 aa12□□□□□ -0.49
SF3B6-201ENST00000233468 CDK11BP21127 795 aaKnown RBP12□□□□□ -0.49
SF3B6-201ENST00000233468 FSHRP23945 695 aa12□□□□□ -0.49
SF3B6-201ENST00000233468 ANXA13P27216 316 aa12□□□□□ -0.49
SF3B6-201ENST00000233468 CDH8P55286 799 aa12□□□□□ -0.49
SF3B6-201ENST00000233468 PSMC1P62191 440 aaKnown RBP12□□□□□ -0.49
SF3B6-201ENST00000233468 TPM4P67936 248 aa12□□□□□ -0.49
SF3B6-201ENST00000233468 CYP27A1Q02318 531 aa12□□□□□ -0.49
SF3B6-201ENST00000233468 INCA1Q0VD86 236 aa12□□□□□ -0.49
SF3B6-201ENST00000233468 MTMR3Q13615 1198 aa12□□□□□ -0.49
SF3B6-201ENST00000233468 CUL2Q13617 745 aa12□□□□□ -0.49
SF3B6-201ENST00000233468 KCNJ12Q14500 433 aa12□□□□□ -0.49
SF3B6-201ENST00000233468 MDH1BQ5I0G3 518 aa12□□□□□ -0.49
SF3B6-201ENST00000233468 SMYD5Q6GMV2 418 aa12□□□□□ -0.49
SF3B6-201ENST00000233468 GBP6Q6ZN66 633 aa12□□□□□ -0.49
SF3B6-201ENST00000233468 PDZD4Q76G19 769 aaPredicted RBP12□□□□□ -0.49
SF3B6-201ENST00000233468 ENOSF1Q7L5Y1 443 aa12□□□□□ -0.49
SF3B6-201ENST00000233468 GRASPQ7Z6J2 395 aaPredicted RBP12□□□□□ -0.49
SF3B6-201ENST00000233468 LRRTM3Q86VH5 581 aa12□□□□□ -0.49
SF3B6-201ENST00000233468 EHBP1Q8NDI1 1231 aa12□□□□□ -0.49
SF3B6-201ENST00000233468 SEMA4DQ92854 862 aa12□□□□□ -0.49
SF3B6-201ENST00000233468 GCNAQ96QF7 691 aa12□□□□□ -0.49
SF3B6-201ENST00000233468 BPIFA3Q9BQP9 254 aa12□□□□□ -0.49
SF3B6-201ENST00000233468 TUBGCP2Q9BSJ2 902 aa12□□□□□ -0.49
SF3B6-201ENST00000233468 DNAJC25Q9H1X3 360 aa12□□□□□ -0.49
SF3B6-201ENST00000233468 APOBEC3GQ9HC16 384 aaKnown RBP12□□□□□ -0.49
SF3B6-201ENST00000233468 MRPS23Q9Y3D9 190 aaKnown RBP12□□□□□ -0.49
SF3B6-201ENST00000233468 DMXL1Q9Y485 3027 aa11.99□□□□□ -0.49
SF3B6-201ENST00000233468 BECN2A8MW95 431 aa11.99□□□□□ -0.49
SF3B6-201ENST00000233468 CILPO75339 1184 aa11.99□□□□□ -0.49
SF3B6-201ENST00000233468 RHOP08100 348 aa11.99□□□□□ -0.49
SF3B6-201ENST00000233468 CSH1P0DML2 217 aa11.99□□□□□ -0.49
SF3B6-201ENST00000233468 CSH2P0DML3 217 aa11.99□□□□□ -0.49
SF3B6-201ENST00000233468 CD58P19256 250 aa11.99□□□□□ -0.49
SF3B6-201ENST00000233468 GBP2P32456 591 aaPredicted RBP11.99□□□□□ -0.49
SF3B6-201ENST00000233468 GRIK1P39086 918 aa11.99□□□□□ -0.49
SF3B6-201ENST00000233468 RAP1GAPP47736 663 aa11.99□□□□□ -0.49
SF3B6-201ENST00000233468 NDST1P52848 882 aa11.99□□□□□ -0.49
SF3B6-201ENST00000233468 GCNT1Q02742 428 aa11.99□□□□□ -0.49
SF3B6-201ENST00000233468 EXOC3L4Q17RC7 722 aa11.99□□□□□ -0.49
SF3B6-201ENST00000233468 ANO6Q4KMQ2 910 aa11.99□□□□□ -0.49
SF3B6-201ENST00000233468 VWA3BQ502W6 1294 aa11.99□□□□□ -0.49
SF3B6-201ENST00000233468 TCP11X2Q5H9J9 407 aa11.99□□□□□ -0.49
SF3B6-201ENST00000233468 IRF2BP1Q8IU81 584 aa11.99□□□□□ -0.49
SF3B6-201ENST00000233468 CRYBG2Q8N1P7 616 aa11.99□□□□□ -0.49
SF3B6-201ENST00000233468 PPM1KQ8N3J5 372 aa11.99□□□□□ -0.49
SF3B6-201ENST00000233468 PSMG2Q969U7 264 aa11.99□□□□□ -0.49
SF3B6-201ENST00000233468 ZDHHC16Q969W1 377 aa11.99□□□□□ -0.49
SF3B6-201ENST00000233468 MYLPFQ96A32 169 aa11.99□□□□□ -0.49
SF3B6-201ENST00000233468 JAKMIP2Q96AA8 810 aa11.99□□□□□ -0.49
SF3B6-201ENST00000233468 PCED1BQ96HM7 432 aa11.99□□□□□ -0.49
SF3B6-201ENST00000233468 MED15Q96RN5 788 aa11.99□□□□□ -0.49
SF3B6-201ENST00000233468 PKMYT1Q99640 499 aa11.99□□□□□ -0.49
SF3B6-201ENST00000233468 CORO1BQ9BR76 489 aa11.99□□□□□ -0.49
SF3B6-201ENST00000233468 MED10Q9BTT4 135 aa11.99□□□□□ -0.49
SF3B6-201ENST00000233468 GPR88Q9GZN0 384 aa11.99□□□□□ -0.49
SF3B6-201ENST00000233468 NDST4Q9H3R1 872 aa11.99□□□□□ -0.49
SF3B6-201ENST00000233468 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.99□□□□□ -0.49
SF3B6-201ENST00000233468 GCNT4Q9P109 453 aa11.99□□□□□ -0.49
SF3B6-201ENST00000233468 DNMT3BQ9UBC3 853 aaKnown RBP11.99□□□□□ -0.49
SF3B6-201ENST00000233468 UXTQ9UBK9 157 aaPredicted RBP11.99□□□□□ -0.49
SF3B6-201ENST00000233468 ZMYM5Q9UJ78 669 aa11.99□□□□□ -0.49
SF3B6-201ENST00000233468 KIAA1257Q9ULG3 409 aa11.99□□□□□ -0.49
SF3B6-201ENST00000233468 FAM186AA6NE01 2351 aa11.99□□□□□ -0.49
SF3B6-201ENST00000233468 PI15O43692 258 aa11.98□□□□□ -0.49
SF3B6-201ENST00000233468 SLC8A3P57103 927 aa11.98□□□□□ -0.49
SF3B6-201ENST00000233468 FKBP15Q5T1M5 1219 aa11.98□□□□□ -0.49
SF3B6-201ENST00000233468 C11orf57Q6ZUT1 292 aaPredicted RBP11.98□□□□□ -0.49
SF3B6-201ENST00000233468 GET4Q7L5D6 327 aaPredicted RBP11.98□□□□□ -0.49
SF3B6-201ENST00000233468 ASCL5Q7RTU5 278 aa11.98□□□□□ -0.49
SF3B6-201ENST00000233468 DNAJB7Q7Z6W7 309 aaPredicted RBP11.98□□□□□ -0.49
SF3B6-201ENST00000233468 ACOT1Q86TX2 421 aa11.98□□□□□ -0.49
SF3B6-201ENST00000233468 SCN4BQ8IWT1 228 aa11.98□□□□□ -0.49
SF3B6-201ENST00000233468 UBALD2Q8IYN6 164 aa11.98□□□□□ -0.49
SF3B6-201ENST00000233468 ZDHHC14Q8IZN3 488 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms