RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 C6orf50Q9HD87 102 aa8.74□□□□□ -1.01
SPARC-201ENST00000231061 AKAP7Q9P0M2 348 aaPredicted RBP8.74□□□□□ -1.01
SPARC-201ENST00000231061 CTNNAL1Q9UBT7 734 aa8.74□□□□□ -1.01
SPARC-201ENST00000231061 TRAF3IP3Q9Y228 551 aa8.74□□□□□ -1.01
SPARC-201ENST00000231061 FARP1Q9Y4F1 1045 aaPredicted RBP8.74□□□□□ -1.01
SPARC-201ENST00000231061 NHSL1Q5SYE7 1610 aa8.74□□□□□ -1.01
SPARC-201ENST00000231061 A0A0J9YVX5 310 aa8.74□□□□□ -1.01
SPARC-201ENST00000231061 AKR1B1P15121 316 aa8.74□□□□□ -1.01
SPARC-201ENST00000231061 SOX6P35712 828 aa8.74□□□□□ -1.01
SPARC-201ENST00000231061 CRKP46108 304 aa8.74□□□□□ -1.01
SPARC-201ENST00000231061 YARSP54577 528 aaKnown RBP8.74□□□□□ -1.01
SPARC-201ENST00000231061 AMPD2Q01433 879 aa8.74□□□□□ -1.01
SPARC-201ENST00000231061 CKAP4Q07065 602 aaKnown RBP8.74□□□□□ -1.01
SPARC-201ENST00000231061 STK4Q13043 487 aa8.74□□□□□ -1.01
SPARC-201ENST00000231061 ANKRD40Q6AI12 368 aa8.74□□□□□ -1.01
SPARC-201ENST00000231061 DYMQ7RTS9 669 aa8.74□□□□□ -1.01
SPARC-201ENST00000231061 KRT25Q7Z3Z0 450 aa8.74□□□□□ -1.01
SPARC-201ENST00000231061 ZNF619Q8N2I2 560 aa8.74□□□□□ -1.01
SPARC-201ENST00000231061 SUPT20HQ8NEM7 779 aa8.74□□□□□ -1.01
SPARC-201ENST00000231061 RRP36Q96EU6 259 aaKnown RBP8.74□□□□□ -1.01
SPARC-201ENST00000231061 PITHD1Q9GZP4 211 aaPredicted RBP8.74□□□□□ -1.01
SPARC-201ENST00000231061 OSGEPL1Q9H4B0 414 aa8.74□□□□□ -1.01
SPARC-201ENST00000231061 RAD21L1Q9H4I0 556 aa8.74□□□□□ -1.01
SPARC-201ENST00000231061 GRID1Q9ULK0 1009 aa8.74□□□□□ -1.01
SPARC-201ENST00000231061 DUSP12Q9UNI6 340 aa8.74□□□□□ -1.01
SPARC-201ENST00000231061 COL14A1Q05707 1796 aaKnown RBP8.74□□□□□ -1.01
SPARC-201ENST00000231061 MYH8P13535 1937 aa8.74□□□□□ -1.01
SPARC-201ENST00000231061 GOLGA8OA6NCC3 632 aa8.74□□□□□ -1.01
SPARC-201ENST00000231061 DCDC2CA8MYV0 355 aa8.74□□□□□ -1.01
SPARC-201ENST00000231061 GOLGA8NF8WBI6 632 aa8.74□□□□□ -1.01
SPARC-201ENST00000231061 TK2O00142 265 aa8.74□□□□□ -1.01
SPARC-201ENST00000231061 RIMBP2O15034 1052 aa8.74□□□□□ -1.01
SPARC-201ENST00000231061 ALDH2P05091 517 aa8.74□□□□□ -1.01
SPARC-201ENST00000231061 NAGAP17050 411 aa8.74□□□□□ -1.01
SPARC-201ENST00000231061 GCNT1Q02742 428 aa8.74□□□□□ -1.01
SPARC-201ENST00000231061 FAM98CQ17RN3 349 aaKnown RBP8.74□□□□□ -1.01
SPARC-201ENST00000231061 SLC35G1Q2M3R5 365 aa8.74□□□□□ -1.01
SPARC-201ENST00000231061 ZACNQ401N2 412 aa8.74□□□□□ -1.01
SPARC-201ENST00000231061 VARS2Q5ST30 1063 aaKnown RBP8.74□□□□□ -1.01
SPARC-201ENST00000231061 WDR59Q6PJI9 974 aa8.74□□□□□ -1.01
SPARC-201ENST00000231061 TRAPPC11Q7Z392 1133 aa8.74□□□□□ -1.01
SPARC-201ENST00000231061 CEP97Q8IW35 865 aa8.74□□□□□ -1.01
SPARC-201ENST00000231061 GSPT2Q8IYD1 628 aaKnown RBP8.74□□□□□ -1.01
SPARC-201ENST00000231061 PLD6Q8N2A8 252 aaKnown RBP8.74□□□□□ -1.01
SPARC-201ENST00000231061 CNBD1Q8NA66 436 aa8.74□□□□□ -1.01
SPARC-201ENST00000231061 ZNF507Q8TCN5 953 aa8.74□□□□□ -1.01
SPARC-201ENST00000231061 METTL2AQ96IZ6 378 aaKnown RBP8.74□□□□□ -1.01
SPARC-201ENST00000231061 EYA3Q99504 573 aa8.74□□□□□ -1.01
SPARC-201ENST00000231061 BHMT2Q9H2M3 363 aa8.74□□□□□ -1.01
SPARC-201ENST00000231061 IFT22Q9H7X7 185 aa8.74□□□□□ -1.01
SPARC-201ENST00000231061 FAM207AQ9NSI2 230 aaPredicted RBP8.74□□□□□ -1.01
SPARC-201ENST00000231061 PHLPP1O60346 1717 aa8.73□□□□□ -1.01
SPARC-201ENST00000231061 MYH13Q9UKX3 1938 aa8.73□□□□□ -1.01
SPARC-201ENST00000231061 C16orf96A6NNT2 1141 aa8.73□□□□□ -1.01
SPARC-201ENST00000231061 HNRNPCL2B2RXH8 293 aa8.73□□□□□ -1.01
SPARC-201ENST00000231061 FAM47E-STBD1D6RA91 191 aa8.73□□□□□ -1.01
SPARC-201ENST00000231061 MEFVO15553 781 aaPredicted RBP8.73□□□□□ -1.01
SPARC-201ENST00000231061 HNRNPCL1O60812 293 aaKnown RBP8.73□□□□□ -1.01
SPARC-201ENST00000231061 MYCLP12524 364 aaPredicted RBP8.73□□□□□ -1.01
SPARC-201ENST00000231061 CCNA2P20248 432 aa8.73□□□□□ -1.01
SPARC-201ENST00000231061 ETV1P50549 477 aa8.73□□□□□ -1.01
SPARC-201ENST00000231061 GRIK5Q16478 980 aa8.73□□□□□ -1.01
SPARC-201ENST00000231061 GEN1Q17RS7 908 aa8.73□□□□□ -1.01
SPARC-201ENST00000231061 ALKBH5Q6P6C2 394 aaKnown RBP8.73□□□□□ -1.01
SPARC-201ENST00000231061 NEK8Q86SG6 692 aa8.73□□□□□ -1.01
SPARC-201ENST00000231061 SLC51BQ86UW2 128 aa8.73□□□□□ -1.01
SPARC-201ENST00000231061 EPHX4Q8IUS5 362 aa8.73□□□□□ -1.01
SPARC-201ENST00000231061 FAM178BQ8IXR5 827 aa8.73□□□□□ -1.01
SPARC-201ENST00000231061 C10orf53Q8N6V4 93 aa8.73□□□□□ -1.01
SPARC-201ENST00000231061 C12orf50Q8NA57 414 aaPredicted RBP8.73□□□□□ -1.01
SPARC-201ENST00000231061 LRRC15Q8TF66 581 aa8.73□□□□□ -1.01
SPARC-201ENST00000231061 IFT81Q8WYA0 676 aa8.73□□□□□ -1.01
SPARC-201ENST00000231061 EXT2Q93063 718 aa8.73□□□□□ -1.01
SPARC-201ENST00000231061 DNAJC1Q96KC8 554 aaKnown RBP8.73□□□□□ -1.01
SPARC-201ENST00000231061 RPRD1AQ96P16 312 aaPredicted RBP8.73□□□□□ -1.01
SPARC-201ENST00000231061 TRIM9Q9C026 710 aa8.73□□□□□ -1.01
SPARC-201ENST00000231061 LACRTQ9GZZ8 138 aa8.73□□□□□ -1.01
SPARC-201ENST00000231061 PLAAQ9Y263 795 aa8.73□□□□□ -1.01
SPARC-201ENST00000231061 INPP5FQ9Y2H2 1132 aa8.73□□□□□ -1.01
SPARC-201ENST00000231061 J3KRW8 73 aa8.73□□□□□ -1.01
SPARC-201ENST00000231061 LAD1O00515 517 aa8.73□□□□□ -1.01
SPARC-201ENST00000231061 KMOO15229 486 aa8.73□□□□□ -1.01
SPARC-201ENST00000231061 ZNF185O15231 689 aa8.73□□□□□ -1.01
SPARC-201ENST00000231061 NDUFS6O75380 124 aaKnown RBP8.73□□□□□ -1.01
SPARC-201ENST00000231061 MYBP10242 640 aa8.73□□□□□ -1.01
SPARC-201ENST00000231061 GARTP22102 1010 aa8.73□□□□□ -1.01
SPARC-201ENST00000231061 CCNFP41002 786 aa8.73□□□□□ -1.01
SPARC-201ENST00000231061 KCNJ5P48544 419 aa8.73□□□□□ -1.01
SPARC-201ENST00000231061 BMPR2Q13873 1038 aa8.73□□□□□ -1.01
SPARC-201ENST00000231061 COTL1Q14019 142 aa8.73□□□□□ -1.01
SPARC-201ENST00000231061 SYDE2Q5VT97 1194 aa8.73□□□□□ -1.01
SPARC-201ENST00000231061 KLC3Q6P597 504 aa8.73□□□□□ -1.01
SPARC-201ENST00000231061 ZNF574Q6ZN55 896 aaPredicted RBP8.73□□□□□ -1.01
SPARC-201ENST00000231061 C16orf86Q6ZW13 317 aa8.73□□□□□ -1.01
SPARC-201ENST00000231061 KRT26Q7Z3Y9 468 aa8.73□□□□□ -1.01
SPARC-201ENST00000231061 MYH14Q7Z406 1995 aaKnown RBP8.73□□□□□ -1.01
SPARC-201ENST00000231061 CCDC13Q8IYE1 715 aa8.73□□□□□ -1.01
SPARC-201ENST00000231061 NRSN1Q8IZ57 195 aa8.73□□□□□ -1.01
SPARC-201ENST00000231061 CYP4X1Q8N118 509 aa8.73□□□□□ -1.01
SPARC-201ENST00000231061 PIK3C3Q8NEB9 887 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms