RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.34□□□□□ -0.11
HCFC2-201ENST00000229330 AP3B1O00203 1094 aa14.34□□□□□ -0.11
HCFC2-201ENST00000229330 TFE3P19532 575 aaPredicted RBP14.34□□□□□ -0.11
HCFC2-201ENST00000229330 RRP1BQ14684 758 aaKnown RBP14.34□□□□□ -0.11
HCFC2-201ENST00000229330 NET1Q7Z628 596 aaPredicted RBP14.34□□□□□ -0.11
HCFC2-201ENST00000229330 TTC39CQ8N584 583 aa14.34□□□□□ -0.11
HCFC2-201ENST00000229330 DCLK3Q9C098 648 aa14.34□□□□□ -0.11
HCFC2-201ENST00000229330 DEPDC5O75140 1603 aa14.34□□□□□ -0.11
HCFC2-201ENST00000229330 F5H6K3 240 aa14.34□□□□□ -0.11
HCFC2-201ENST00000229330 GRK2P25098 689 aa14.34□□□□□ -0.11
HCFC2-201ENST00000229330 NCKAP1LP55160 1127 aa14.34□□□□□ -0.11
HCFC2-201ENST00000229330 RUNX1T1Q06455 604 aa14.34□□□□□ -0.11
HCFC2-201ENST00000229330 KLRC3Q07444 240 aa14.34□□□□□ -0.11
HCFC2-201ENST00000229330 MCL1Q07820 350 aa14.34□□□□□ -0.11
HCFC2-201ENST00000229330 RBBP7Q16576 425 aa14.34□□□□□ -0.11
HCFC2-201ENST00000229330 PSPC1Q8WXF1 523 aaKnown RBP14.34□□□□□ -0.11
HCFC2-201ENST00000229330 GCNAQ96QF7 691 aa14.34□□□□□ -0.11
HCFC2-201ENST00000229330 SIK3Q9Y2K2 1263 aa14.34□□□□□ -0.11
HCFC2-201ENST00000229330 RARAP10276 462 aa14.34□□□□□ -0.11
HCFC2-201ENST00000229330 SNRPFP62306 86 aaKnown RBP14.34□□□□□ -0.11
HCFC2-201ENST00000229330 EN1Q05925 392 aaPredicted RBP14.34□□□□□ -0.11
HCFC2-201ENST00000229330 PKN1Q16512 942 aa14.34□□□□□ -0.11
HCFC2-201ENST00000229330 CCDC81Q6ZN84 652 aa14.34□□□□□ -0.11
HCFC2-201ENST00000229330 OR6P1Q8NGX9 317 aa14.34□□□□□ -0.11
HCFC2-201ENST00000229330 WNK4Q96J92 1243 aa14.34□□□□□ -0.11
HCFC2-201ENST00000229330 AGAP3Q96P47 875 aa14.34□□□□□ -0.11
HCFC2-201ENST00000229330 RMDN3Q96TC7 470 aa14.34□□□□□ -0.11
HCFC2-201ENST00000229330 CTNNAL1Q9UBT7 734 aa14.34□□□□□ -0.11
HCFC2-201ENST00000229330 SUGT1Q9Y2Z0 365 aa14.34□□□□□ -0.11
HCFC2-201ENST00000229330 H2AFYO75367 372 aaKnown RBP14.33□□□□□ -0.11
HCFC2-201ENST00000229330 ATP5BP06576 529 aaKnown RBP14.33□□□□□ -0.11
HCFC2-201ENST00000229330 APOA4P06727 396 aa14.33□□□□□ -0.11
HCFC2-201ENST00000229330 CERKQ8TCT0 537 aa14.33□□□□□ -0.11
HCFC2-201ENST00000229330 SCFD1Q8WVM8 642 aa14.33□□□□□ -0.11
HCFC2-201ENST00000229330 EZH1Q92800 747 aaPredicted RBP14.33□□□□□ -0.11
HCFC2-201ENST00000229330 ULK4Q96C45 1275 aa14.33□□□□□ -0.11
HCFC2-201ENST00000229330 ACSF2Q96CM8 615 aaPredicted RBP14.33□□□□□ -0.11
HCFC2-201ENST00000229330 MTMR4Q9NYA4 1195 aa14.33□□□□□ -0.11
HCFC2-201ENST00000229330 REXO2Q9Y3B8 237 aaKnown RBP14.33□□□□□ -0.11
HCFC2-201ENST00000229330 E9PBE3 544 aa14.33□□□□□ -0.12
HCFC2-201ENST00000229330 KLHL41O60662 606 aa14.33□□□□□ -0.12
HCFC2-201ENST00000229330 ALADP13716 330 aa14.33□□□□□ -0.12
HCFC2-201ENST00000229330 PTK2BQ14289 1009 aa14.33□□□□□ -0.12
HCFC2-201ENST00000229330 KYQ8NBH2 561 aa14.33□□□□□ -0.12
HCFC2-201ENST00000229330 GLMNQ92990 594 aa14.33□□□□□ -0.12
HCFC2-201ENST00000229330 CYLDQ9NQC7 956 aa14.33□□□□□ -0.12
HCFC2-201ENST00000229330 PYGMP11217 842 aa14.33□□□□□ -0.12
HCFC2-201ENST00000229330 CHRNA5P30532 468 aa14.33□□□□□ -0.12
HCFC2-201ENST00000229330 TNFAIP2Q03169 654 aa14.33□□□□□ -0.12
HCFC2-201ENST00000229330 ZFP1Q6P2D0 407 aa14.33□□□□□ -0.12
HCFC2-201ENST00000229330 HEATR4Q86WZ0 1026 aa14.33□□□□□ -0.12
HCFC2-201ENST00000229330 OR6Y1Q8NGX8 325 aa14.33□□□□□ -0.12
HCFC2-201ENST00000229330 EXD1Q8NHP7 514 aa14.33□□□□□ -0.12
HCFC2-201ENST00000229330 RNF217Q8TC41 542 aa14.33□□□□□ -0.12
HCFC2-201ENST00000229330 SLC20A1Q8WUM9 679 aa14.33□□□□□ -0.12
HCFC2-201ENST00000229330 PYDC1Q8WXC3 89 aa14.33□□□□□ -0.12
HCFC2-201ENST00000229330 NSMCE4AQ9NXX6 385 aa14.33□□□□□ -0.12
HCFC2-201ENST00000229330 PPARGP37231 505 aaPredicted RBP14.33□□□□□ -0.12
HCFC2-201ENST00000229330 RPL5P46777 297 aaKnown RBP14.33□□□□□ -0.12
HCFC2-201ENST00000229330 APBB2Q92870 758 aa14.33□□□□□ -0.12
HCFC2-201ENST00000229330 DDX50Q9BQ39 737 aaKnown RBP14.33□□□□□ -0.12
HCFC2-201ENST00000229330 SAC3D1A6NKF1 404 aa14.32□□□□□ -0.12
HCFC2-201ENST00000229330 HLA-DRAP01903 254 aa14.32□□□□□ -0.12
HCFC2-201ENST00000229330 MMP13P45452 471 aa14.32□□□□□ -0.12
HCFC2-201ENST00000229330 EARS2Q5JPH6 523 aaKnown RBP14.32□□□□□ -0.12
HCFC2-201ENST00000229330 SLC5A5Q92911 643 aa14.32□□□□□ -0.12
HCFC2-201ENST00000229330 APOPT1Q96IL0 206 aa14.32□□□□□ -0.12
HCFC2-201ENST00000229330 ELMO2Q96JJ3 720 aa14.32□□□□□ -0.12
HCFC2-201ENST00000229330 FAM217BQ9NTX9 383 aaPredicted RBP14.32□□□□□ -0.12
HCFC2-201ENST00000229330 DAGLAQ9Y4D2 1042 aa14.32□□□□□ -0.12
HCFC2-201ENST00000229330 ACTL7BQ9Y614 415 aa14.32□□□□□ -0.12
HCFC2-201ENST00000229330 V9GYQ6 96 aa14.32□□□□□ -0.12
HCFC2-201ENST00000229330 DYTNA2CJ06 578 aa14.32□□□□□ -0.12
HCFC2-201ENST00000229330 RALBP11234 206 aa14.32□□□□□ -0.12
HCFC2-201ENST00000229330 CYP11B1P15538 503 aa14.32□□□□□ -0.12
HCFC2-201ENST00000229330 ZNF23P17027 643 aa14.32□□□□□ -0.12
HCFC2-201ENST00000229330 MAP3K7CLP57077 242 aa14.32□□□□□ -0.12
HCFC2-201ENST00000229330 PDK3Q15120 406 aa14.32□□□□□ -0.12
HCFC2-201ENST00000229330 TFDP3Q5H9I0 405 aa14.32□□□□□ -0.12
HCFC2-201ENST00000229330 OLFML1Q6UWY5 402 aa14.32□□□□□ -0.12
HCFC2-201ENST00000229330 PPHLN1Q8NEY8 458 aaKnown RBP14.32□□□□□ -0.12
HCFC2-201ENST00000229330 ECSITQ9BQ95 431 aa14.32□□□□□ -0.12
HCFC2-201ENST00000229330 MRPL4Q9BYD3 311 aaKnown RBP14.32□□□□□ -0.12
HCFC2-201ENST00000229330 LRRC4BQ9NT99 713 aa14.32□□□□□ -0.12
HCFC2-201ENST00000229330 NMRK1Q9NWW6 199 aa14.32□□□□□ -0.12
HCFC2-201ENST00000229330 FEM1BQ9UK73 627 aa14.32□□□□□ -0.12
HCFC2-201ENST00000229330 SHOC2Q9UQ13 582 aa14.32□□□□□ -0.12
HCFC2-201ENST00000229330 F8W8V4 182 aa14.32□□□□□ -0.12
HCFC2-201ENST00000229330 DNM1LO00429 736 aa14.32□□□□□ -0.12
HCFC2-201ENST00000229330 SMNDC1O75940 238 aaKnown RBP eCLIP14.32□□□□□ -0.12
HCFC2-201ENST00000229330 AKAP3O75969 853 aa14.32□□□□□ -0.12
HCFC2-201ENST00000229330 NCOA4Q13772 614 aa14.32□□□□□ -0.12
HCFC2-201ENST00000229330 ZC3H12BQ5HYM0 836 aaKnown RBP14.32□□□□□ -0.12
HCFC2-201ENST00000229330 SWSAP1Q6NVH7 229 aa14.32□□□□□ -0.12
HCFC2-201ENST00000229330 METTL23Q86XA0 190 aa14.32□□□□□ -0.12
HCFC2-201ENST00000229330 KRT35Q92764 455 aa14.32□□□□□ -0.12
HCFC2-201ENST00000229330 ZFYVE19Q96K21 471 aa14.32□□□□□ -0.12
HCFC2-201ENST00000229330 RMI1Q9H9A7 625 aa14.32□□□□□ -0.12
HCFC2-201ENST00000229330 DPPA5A6NC42 116 aa14.32□□□□□ -0.12
HCFC2-201ENST00000229330 HNRNPCL2B2RXH8 293 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms