RNA–Protein interactions for RNA: ENST00000225726.9

CCDC47-201, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC47, Length 3,466 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-201ENST00000225726 RCOR2Q8IZ40 523 aa15.67■□□□□ 0.1
CCDC47-201ENST00000225726 B3GALNT2Q8NCR0 500 aa15.67■□□□□ 0.1
CCDC47-201ENST00000225726 RBM41Q96IZ5 413 aaKnown RBP15.67■□□□□ 0.1
CCDC47-201ENST00000225726 PLEKHA4Q9H4M7 779 aa15.67■□□□□ 0.1
CCDC47-201ENST00000225726 CYLDQ9NQC7 956 aa15.67■□□□□ 0.1
CCDC47-201ENST00000225726 TTI1O43156 1089 aa15.67■□□□□ 0.1
CCDC47-201ENST00000225726 GJC1P36383 396 aa15.67■□□□□ 0.1
CCDC47-201ENST00000225726 CETN2P41208 172 aa15.67■□□□□ 0.1
CCDC47-201ENST00000225726 RGS7P49802 495 aa15.67■□□□□ 0.1
CCDC47-201ENST00000225726 DR1Q01658 176 aa15.67■□□□□ 0.1
CCDC47-201ENST00000225726 UPP1Q16831 310 aa15.67■□□□□ 0.1
CCDC47-201ENST00000225726 CCDC50Q8IVM0 306 aa15.67■□□□□ 0.1
CCDC47-201ENST00000225726 MAGOHBQ96A72 148 aaKnown RBP15.67■□□□□ 0.1
CCDC47-201ENST00000225726 CACNG4Q9UBN1 327 aa15.67■□□□□ 0.1
CCDC47-201ENST00000225726 PCYOX1Q9UHG3 505 aa15.67■□□□□ 0.1
CCDC47-201ENST00000225726 PAX3P23760 479 aa15.67■□□□□ 0.1
CCDC47-201ENST00000225726 ADORA2BP29275 332 aa15.67■□□□□ 0.1
CCDC47-201ENST00000225726 AARSP49588 968 aaKnown RBP eCLIP15.67■□□□□ 0.1
CCDC47-201ENST00000225726 CUL1Q13616 776 aa15.67■□□□□ 0.1
CCDC47-201ENST00000225726 CASP8Q14790 479 aa15.67■□□□□ 0.1
CCDC47-201ENST00000225726 EMBQ6PCB8 327 aa15.67■□□□□ 0.1
CCDC47-201ENST00000225726 POLNQ7Z5Q5 900 aa15.67■□□□□ 0.1
CCDC47-201ENST00000225726 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.67■□□□□ 0.1
CCDC47-201ENST00000225726 UROC1Q96N76 676 aa15.67■□□□□ 0.1
CCDC47-201ENST00000225726 PTPN22Q9Y2R2 807 aa15.67■□□□□ 0.1
CCDC47-201ENST00000225726 CASTOR2A6NHX0 329 aa15.66■□□□□ 0.1
CCDC47-201ENST00000225726 TULP2O00295 520 aa15.66■□□□□ 0.1
CCDC47-201ENST00000225726 TCF4P15884 667 aa15.66■□□□□ 0.1
CCDC47-201ENST00000225726 LHX1P48742 406 aa15.66■□□□□ 0.1
CCDC47-201ENST00000225726 CARSP49589 748 aaKnown RBP15.66■□□□□ 0.1
CCDC47-201ENST00000225726 DSTYKQ6XUX3 929 aa15.66■□□□□ 0.1
CCDC47-201ENST00000225726 ZDHHC17Q8IUH5 632 aa15.66■□□□□ 0.1
CCDC47-201ENST00000225726 PAK6Q9NQU5 681 aaPredicted RBP15.66■□□□□ 0.1
CCDC47-201ENST00000225726 UTP11Q9Y3A2 253 aaKnown RBP15.66■□□□□ 0.1
CCDC47-201ENST00000225726 ESYT3A0FGR9 886 aa15.66■□□□□ 0.1
CCDC47-201ENST00000225726 POMCP01189 267 aa15.66■□□□□ 0.1
CCDC47-201ENST00000225726 KRT1P04264 644 aa15.66■□□□□ 0.1
CCDC47-201ENST00000225726 FNTAP49354 379 aa15.66■□□□□ 0.1
CCDC47-201ENST00000225726 NNTQ13423 1086 aa15.66■□□□□ 0.1
CCDC47-201ENST00000225726 CNPY4Q8N129 248 aa15.66■□□□□ 0.1
CCDC47-201ENST00000225726 EMC1Q8N766 993 aa15.66■□□□□ 0.1
CCDC47-201ENST00000225726 C3orf58Q8NDZ4 430 aa15.66■□□□□ 0.1
CCDC47-201ENST00000225726 IFT81Q8WYA0 676 aa15.66■□□□□ 0.1
CCDC47-201ENST00000225726 SEC14L1Q92503 715 aa15.66■□□□□ 0.1
CCDC47-201ENST00000225726 CAVIN3Q969G5 261 aa15.66■□□□□ 0.1
CCDC47-201ENST00000225726 HNRNPABQ99729 332 aaKnown RBP15.66■□□□□ 0.1
CCDC47-201ENST00000225726 RAB17Q9H0T7 212 aa15.66■□□□□ 0.1
CCDC47-201ENST00000225726 LRRC19Q9H756 370 aa15.66■□□□□ 0.1
CCDC47-201ENST00000225726 RASAL2Q9UJF2 1139 aa15.66■□□□□ 0.1
CCDC47-201ENST00000225726 C9IYK1 514 aa15.66■□□□□ 0.1
CCDC47-201ENST00000225726 EOMESO95936 686 aa15.66■□□□□ 0.1
CCDC47-201ENST00000225726 SELPP16109 830 aa15.66■□□□□ 0.1
CCDC47-201ENST00000225726 PTPN1P18031 435 aaKnown RBP15.66■□□□□ 0.1
CCDC47-201ENST00000225726 IGFBP6P24592 240 aaPredicted RBP15.66■□□□□ 0.1
CCDC47-201ENST00000225726 RPL34P49207 117 aaKnown RBP15.66■□□□□ 0.1
CCDC47-201ENST00000225726 COPS2P61201 443 aa15.66■□□□□ 0.1
CCDC47-201ENST00000225726 TUSC3Q13454 348 aa15.66■□□□□ 0.1
CCDC47-201ENST00000225726 HADHQ16836 314 aaKnown RBP15.66■□□□□ 0.1
CCDC47-201ENST00000225726 OLFML1Q6UWY5 402 aa15.66■□□□□ 0.1
CCDC47-201ENST00000225726 LRRC8DQ7L1W4 858 aa15.66■□□□□ 0.1
CCDC47-201ENST00000225726 SLC2A14Q8TDB8 520 aa15.66■□□□□ 0.1
CCDC47-201ENST00000225726 ASNSD1Q9NWL6 643 aa15.66■□□□□ 0.1
CCDC47-201ENST00000225726 GPD1P21695 349 aa15.65■□□□□ 0.1
CCDC47-201ENST00000225726 IBSPP21815 317 aaPredicted RBP15.65■□□□□ 0.1
CCDC47-201ENST00000225726 COILP38432 576 aaPredicted RBP15.65■□□□□ 0.1
CCDC47-201ENST00000225726 ACADSBP45954 432 aa15.65■□□□□ 0.1
CCDC47-201ENST00000225726 ZNF143P52747 638 aaPredicted RBP15.65■□□□□ 0.1
CCDC47-201ENST00000225726 SLC6A3Q01959 620 aa15.65■□□□□ 0.1
CCDC47-201ENST00000225726 BFSP2Q13515 415 aa15.65■□□□□ 0.1
CCDC47-201ENST00000225726 SLC24A5Q71RS6 500 aa15.65■□□□□ 0.1
CCDC47-201ENST00000225726 RTN4RL1Q86UN2 441 aaPredicted RBP15.65■□□□□ 0.1
CCDC47-201ENST00000225726 SPATA18Q8TC71 538 aa15.65■□□□□ 0.1
CCDC47-201ENST00000225726 SLITRK1Q96PX8 696 aa15.65■□□□□ 0.1
CCDC47-201ENST00000225726 BEGAINQ9BUH8 593 aa15.65■□□□□ 0.1
CCDC47-201ENST00000225726 OSBPL8Q9BZF1 889 aa15.65■□□□□ 0.1
CCDC47-201ENST00000225726 NFU1Q9UMS0 254 aa15.65■□□□□ 0.1
CCDC47-201ENST00000225726 PIK3R2O00459 728 aa15.65■□□□□ 0.1
CCDC47-201ENST00000225726 LRCH4O75427 683 aa15.65■□□□□ 0.1
CCDC47-201ENST00000225726 RALAP11233 206 aa15.65■□□□□ 0.1
CCDC47-201ENST00000225726 PTPN7P35236 360 aa15.65■□□□□ 0.1
CCDC47-201ENST00000225726 PTGIRP43119 386 aa15.65■□□□□ 0.1
CCDC47-201ENST00000225726 SLC25A11Q02978 314 aaKnown RBP15.65■□□□□ 0.1
CCDC47-201ENST00000225726 SMC1AQ14683 1233 aaKnown RBP15.65■□□□□ 0.1
CCDC47-201ENST00000225726 TTC27Q6P3X3 843 aa15.65■□□□□ 0.1
CCDC47-201ENST00000225726 CCDC137Q6PK04 289 aaKnown RBP15.65■□□□□ 0.1
CCDC47-201ENST00000225726 FAM126BQ8IXS8 530 aa15.65■□□□□ 0.1
CCDC47-201ENST00000225726 KRT222Q8N1A0 295 aa15.65■□□□□ 0.1
CCDC47-201ENST00000225726 FTHL17Q9BXU8 183 aa15.65■□□□□ 0.1
CCDC47-201ENST00000225726 VIPAS39Q9H9C1 493 aa15.65■□□□□ 0.1
CCDC47-201ENST00000225726 DDX43Q9NXZ2 648 aaKnown RBP15.65■□□□□ 0.1
CCDC47-201ENST00000225726 INPP5FQ9Y2H2 1132 aa15.65■□□□□ 0.1
CCDC47-201ENST00000225726 C2CD4BA6NLJ0 364 aa15.64■□□□□ 0.1
CCDC47-201ENST00000225726 KRT7P08729 469 aa15.64■□□□□ 0.1
CCDC47-201ENST00000225726 SCNN1AP37088 669 aa15.64■□□□□ 0.1
CCDC47-201ENST00000225726 FAM189BP81408 668 aa15.64■□□□□ 0.1
CCDC47-201ENST00000225726 KLF1Q13351 362 aaPredicted RBP15.64■□□□□ 0.1
CCDC47-201ENST00000225726 JAMLQ86YT9 394 aa15.64■□□□□ 0.1
CCDC47-201ENST00000225726 ARFGAP1Q8N6T3 406 aa15.64■□□□□ 0.1
CCDC47-201ENST00000225726 LINC01599Q8WXQ3 324 aa15.64■□□□□ 0.1
CCDC47-201ENST00000225726 HSFY1Q96LI6 401 aa15.64■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms