RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 MAGEA11P43364 429 aa14.86□□□□□ -0.03
SEC61B-201ENST00000223641 NDUFV1P49821 464 aa14.86□□□□□ -0.03
SEC61B-201ENST00000223641 CYP27A1Q02318 531 aa14.86□□□□□ -0.03
SEC61B-201ENST00000223641 PDE4CQ08493 712 aa14.86□□□□□ -0.03
SEC61B-201ENST00000223641 BST2Q10589 180 aaKnown RBP14.86□□□□□ -0.03
SEC61B-201ENST00000223641 SMC1AQ14683 1233 aaKnown RBP14.86□□□□□ -0.03
SEC61B-201ENST00000223641 C10orf76Q5T2E6 689 aa14.86□□□□□ -0.03
SEC61B-201ENST00000223641 ACAD10Q6JQN1 1059 aa14.86□□□□□ -0.03
SEC61B-201ENST00000223641 PPP1R2P3Q6NXS1 205 aa14.86□□□□□ -0.03
SEC61B-201ENST00000223641 LILRA6Q6PI73 481 aa14.86□□□□□ -0.03
SEC61B-201ENST00000223641 VSTM1Q6UX27 236 aa14.86□□□□□ -0.03
SEC61B-201ENST00000223641 RNF19BQ6ZMZ0 732 aa14.86□□□□□ -0.03
SEC61B-201ENST00000223641 CLEC20AQ6ZU45 233 aa14.86□□□□□ -0.03
SEC61B-201ENST00000223641 TMEM35BQ8NCS4 154 aa14.86□□□□□ -0.03
SEC61B-201ENST00000223641 ZMIZ2Q8NF64 920 aa14.86□□□□□ -0.03
SEC61B-201ENST00000223641 UBA3Q8TBC4 463 aa14.86□□□□□ -0.03
SEC61B-201ENST00000223641 SMARCD1Q96GM5 515 aa14.86□□□□□ -0.03
SEC61B-201ENST00000223641 KLHL5Q96PQ7 755 aa14.86□□□□□ -0.03
SEC61B-201ENST00000223641 SMOQ99835 787 aa14.86□□□□□ -0.03
SEC61B-201ENST00000223641 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.86□□□□□ -0.03
SEC61B-201ENST00000223641 UBXN6Q9BZV1 441 aa14.86□□□□□ -0.03
SEC61B-201ENST00000223641 SPTLC3Q9NUV7 552 aa14.86□□□□□ -0.03
SEC61B-201ENST00000223641 TAS2R14Q9NYV8 317 aa14.86□□□□□ -0.03
SEC61B-201ENST00000223641 HESX1Q9UBX0 185 aa14.86□□□□□ -0.03
SEC61B-201ENST00000223641 AFF4Q9UHB7 1163 aaKnown RBP14.86□□□□□ -0.03
SEC61B-201ENST00000223641 CYTH4Q9UIA0 394 aa14.86□□□□□ -0.03
SEC61B-201ENST00000223641 MAFFQ9ULX9 164 aa14.86□□□□□ -0.03
SEC61B-201ENST00000223641 REXO2Q9Y3B8 237 aaKnown RBP14.86□□□□□ -0.03
SEC61B-201ENST00000223641 CEP83Q9Y592 693 aa14.86□□□□□ -0.03
SEC61B-201ENST00000223641 PCDHB5Q9Y5E4 795 aa14.86□□□□□ -0.03
SEC61B-201ENST00000223641 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.86□□□□□ -0.036e-9■■■■□ 24.2
SEC61B-201ENST00000223641 COL4A4P53420 1690 aaPredicted RBP14.86□□□□□ -0.03
SEC61B-201ENST00000223641 PLXNA3P51805 1871 aa14.85□□□□□ -0.03
SEC61B-201ENST00000223641 TMEM265A0A087WTH1 108 aa14.85□□□□□ -0.03
SEC61B-201ENST00000223641 EPOPA6NHQ4 379 aa14.85□□□□□ -0.03
SEC61B-201ENST00000223641 HIDE1A8MVS5 230 aa14.85□□□□□ -0.03
SEC61B-201ENST00000223641 XPO1O14980 1071 aaKnown RBP14.85□□□□□ -0.03
SEC61B-201ENST00000223641 LPXNO60711 386 aa14.85□□□□□ -0.03
SEC61B-201ENST00000223641 BEST1O76090 585 aa14.85□□□□□ -0.03
SEC61B-201ENST00000223641 FAM200BP0CF97 657 aa14.85□□□□□ -0.03
SEC61B-201ENST00000223641 CPB1P15086 417 aa14.85□□□□□ -0.03
SEC61B-201ENST00000223641 ATF2P15336 505 aa14.85□□□□□ -0.03
SEC61B-201ENST00000223641 BDNFP23560 247 aa14.85□□□□□ -0.03
SEC61B-201ENST00000223641 ADORA2BP29275 332 aa14.85□□□□□ -0.03
SEC61B-201ENST00000223641 IRS1P35568 1242 aa14.85□□□□□ -0.03
SEC61B-201ENST00000223641 PLA2G4AP47712 749 aa14.85□□□□□ -0.03
SEC61B-201ENST00000223641 CACNA2D1P54289 1103 aa14.85□□□□□ -0.03
SEC61B-201ENST00000223641 PTP4A2Q12974 167 aa14.85□□□□□ -0.03
SEC61B-201ENST00000223641 CCDC122Q5T0U0 273 aa14.85□□□□□ -0.03
SEC61B-201ENST00000223641 PRPF38BQ5VTL8 546 aaKnown RBP14.85□□□□□ -0.03
SEC61B-201ENST00000223641 PHF13Q86YI8 300 aaPredicted RBP14.85□□□□□ -0.03
SEC61B-201ENST00000223641 SPATA2LQ8IUW3 424 aaPredicted RBP14.85□□□□□ -0.03
SEC61B-201ENST00000223641 PASD1Q8IV76 773 aa14.85□□□□□ -0.03
SEC61B-201ENST00000223641 ATAD1Q8NBU5 361 aa14.85□□□□□ -0.03
SEC61B-201ENST00000223641 C1orf131Q8NDD1 294 aaKnown RBP14.85□□□□□ -0.03
SEC61B-201ENST00000223641 ARNTL2Q8WYA1 636 aa14.85□□□□□ -0.03
SEC61B-201ENST00000223641 SECISBP2LQ93073 1101 aaKnown RBP14.85□□□□□ -0.03
SEC61B-201ENST00000223641 VCPIP1Q96JH7 1222 aa14.85□□□□□ -0.03
SEC61B-201ENST00000223641 MED10Q9BTT4 135 aa14.85□□□□□ -0.03
SEC61B-201ENST00000223641 SLC4A5Q9BY07 1137 aa14.85□□□□□ -0.03
SEC61B-201ENST00000223641 PDCL3Q9H2J4 239 aa14.85□□□□□ -0.03
SEC61B-201ENST00000223641 CRISPLD1Q9H336 500 aa14.85□□□□□ -0.03
SEC61B-201ENST00000223641 CERS4Q9HA82 394 aa14.85□□□□□ -0.03
SEC61B-201ENST00000223641 PNPLA8Q9NP80 782 aa14.85□□□□□ -0.03
SEC61B-201ENST00000223641 CYLDQ9NQC7 956 aa14.85□□□□□ -0.03
SEC61B-201ENST00000223641 ENTPD7Q9NQZ7 604 aa14.85□□□□□ -0.03
SEC61B-201ENST00000223641 ADGRG1Q9Y653 693 aa14.85□□□□□ -0.03
SEC61B-201ENST00000223641 MTCL1Q9Y4B5 1905 aaKnown RBP14.85□□□□□ -0.03
SEC61B-201ENST00000223641 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.84□□□□□ -0.03
SEC61B-201ENST00000223641 HHLA1C9JL84 531 aa14.84□□□□□ -0.03
SEC61B-201ENST00000223641 TULP2O00295 520 aa14.84□□□□□ -0.03
SEC61B-201ENST00000223641 AP1G2O75843 785 aa14.84□□□□□ -0.03
SEC61B-201ENST00000223641 GABBR2O75899 941 aa14.84□□□□□ -0.03
SEC61B-201ENST00000223641 FTLP02792 175 aaPredicted RBP14.84□□□□□ -0.03
SEC61B-201ENST00000223641 MMP8P22894 467 aa14.84□□□□□ -0.03
SEC61B-201ENST00000223641 CYP2F1P24903 491 aa14.84□□□□□ -0.03
SEC61B-201ENST00000223641 GABRB2P47870 512 aa14.84□□□□□ -0.03
SEC61B-201ENST00000223641 ARPP19P56211 112 aa14.84□□□□□ -0.03
SEC61B-201ENST00000223641 PDCLQ13371 301 aa14.84□□□□□ -0.03
SEC61B-201ENST00000223641 NAA35Q5VZE5 725 aa14.84□□□□□ -0.03
SEC61B-201ENST00000223641 PLPP4Q5VZY2 271 aa14.84□□□□□ -0.03
SEC61B-201ENST00000223641 PMF1Q6P1K2 205 aa14.84□□□□□ -0.03
SEC61B-201ENST00000223641 TOGARAM2Q6ZUX3 1019 aa14.84□□□□□ -0.03
SEC61B-201ENST00000223641 MON1BQ7L1V2 547 aa14.84□□□□□ -0.03
SEC61B-201ENST00000223641 TMEM110Q86TL2 294 aa14.84□□□□□ -0.03
SEC61B-201ENST00000223641 CPA5Q8WXQ8 436 aa14.84□□□□□ -0.03
SEC61B-201ENST00000223641 KCTD13Q8WZ19 329 aa14.84□□□□□ -0.03
SEC61B-201ENST00000223641 HSFY1Q96LI6 401 aa14.84□□□□□ -0.03
SEC61B-201ENST00000223641 C8orf48Q96LL4 319 aa14.84□□□□□ -0.03
SEC61B-201ENST00000223641 EMILIN2Q9BXX0 1053 aa14.84□□□□□ -0.03
SEC61B-201ENST00000223641 RHOBTB2Q9BYZ6 727 aa14.84□□□□□ -0.03
SEC61B-201ENST00000223641 KRT82Q9NSB4 513 aa14.84□□□□□ -0.03
SEC61B-201ENST00000223641 SEPT11Q9NVA2 429 aaKnown RBP14.84□□□□□ -0.03
SEC61B-201ENST00000223641 ABI2Q9NYB9 513 aaPredicted RBP14.84□□□□□ -0.03
SEC61B-201ENST00000223641 INTUQ9ULD6 942 aa14.84□□□□□ -0.03
SEC61B-201ENST00000223641 GREB1Q4ZG55 1949 aa14.84□□□□□ -0.03
SEC61B-201ENST00000223641 CDH23Q9H251 3354 aa14.84□□□□□ -0.03
SEC61B-201ENST00000223641 ANKRD62A6NC57 917 aa14.83□□□□□ -0.04
SEC61B-201ENST00000223641 ADH1AP07327 375 aa14.83□□□□□ -0.04
SEC61B-201ENST00000223641 HAPLN1P10915 354 aaPredicted RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms