RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 PTGIRP43119 386 aa12.91□□□□□ -0.34
TM9SF4-201ENST00000217315 STILQ15468 1287 aa12.91□□□□□ -0.34
TM9SF4-201ENST00000217315 RFX8Q6ZV50 586 aa12.91□□□□□ -0.34
TM9SF4-201ENST00000217315 MOB2Q70IA6 237 aa12.91□□□□□ -0.34
TM9SF4-201ENST00000217315 PHF13Q86YI8 300 aaPredicted RBP12.91□□□□□ -0.34
TM9SF4-201ENST00000217315 WDR75Q8IWA0 830 aaKnown RBP12.91□□□□□ -0.34
TM9SF4-201ENST00000217315 LMO3Q8TAP4 145 aa12.91□□□□□ -0.34
TM9SF4-201ENST00000217315 MAGEB18Q96M61 343 aa12.91□□□□□ -0.34
TM9SF4-201ENST00000217315 SLITRK1Q96PX8 696 aa12.91□□□□□ -0.34
TM9SF4-201ENST00000217315 FAM111AQ96PZ2 611 aa12.91□□□□□ -0.34
TM9SF4-201ENST00000217315 KDM4CQ9H3R0 1056 aa12.91□□□□□ -0.34
TM9SF4-201ENST00000217315 ABCF3Q9NUQ8 709 aa12.91□□□□□ -0.34
TM9SF4-201ENST00000217315 GPRC5DQ9NZD1 345 aa12.91□□□□□ -0.34
TM9SF4-201ENST00000217315 TRIM49D1C9J1S8 452 aa12.91□□□□□ -0.34
TM9SF4-201ENST00000217315 NCF2P19878 526 aaPredicted RBP12.91□□□□□ -0.34
TM9SF4-201ENST00000217315 TARSP26639 723 aaKnown RBP12.91□□□□□ -0.34
TM9SF4-201ENST00000217315 JADE1Q6IE81 842 aa12.91□□□□□ -0.34
TM9SF4-201ENST00000217315 FAM172AQ8WUF8 416 aa12.91□□□□□ -0.34
TM9SF4-201ENST00000217315 SMYD3Q9H7B4 428 aa12.91□□□□□ -0.34
TM9SF4-201ENST00000217315 TSPAN16Q9UKR8 245 aa12.91□□□□□ -0.34
TM9SF4-201ENST00000217315 SHOC2Q9UQ13 582 aa12.91□□□□□ -0.34
TM9SF4-201ENST00000217315 H3BRB1 525 aa12.9□□□□□ -0.34
TM9SF4-201ENST00000217315 MAFO75444 373 aaPredicted RBP12.9□□□□□ -0.34
TM9SF4-201ENST00000217315 NFICP08651 508 aa12.9□□□□□ -0.34
TM9SF4-201ENST00000217315 MMP8P22894 467 aa12.9□□□□□ -0.34
TM9SF4-201ENST00000217315 SLC26A2P50443 739 aa12.9□□□□□ -0.34
TM9SF4-201ENST00000217315 HADHBP55084 474 aaKnown RBP12.9□□□□□ -0.34
TM9SF4-201ENST00000217315 MAP7D1Q3KQU3 841 aa12.9□□□□□ -0.34
TM9SF4-201ENST00000217315 DCAF6Q58WW2 860 aa12.9□□□□□ -0.34
TM9SF4-201ENST00000217315 ZNF516Q92618 1163 aa12.9□□□□□ -0.34
TM9SF4-201ENST00000217315 ALKBH8Q96BT7 664 aaKnown RBP12.9□□□□□ -0.34
TM9SF4-201ENST00000217315 ZBTB10Q96DT7 871 aa12.9□□□□□ -0.34
TM9SF4-201ENST00000217315 TUT1Q9H6E5 874 aaKnown RBP12.9□□□□□ -0.34
TM9SF4-201ENST00000217315 DHX33Q9H6R0 707 aaKnown RBP12.9□□□□□ -0.34
TM9SF4-201ENST00000217315 APOBEC3GQ9HC16 384 aaKnown RBP12.9□□□□□ -0.34
TM9SF4-201ENST00000217315 NOD2Q9HC29 1040 aa12.9□□□□□ -0.34
TM9SF4-201ENST00000217315 STRCQ7RTU9 1775 aa12.9□□□□□ -0.34
TM9SF4-201ENST00000217315 LIASO43766 372 aa12.9□□□□□ -0.34
TM9SF4-201ENST00000217315 FARP2O94887 1054 aaPredicted RBP12.9□□□□□ -0.34
TM9SF4-201ENST00000217315 CYP2C9P11712 490 aa12.9□□□□□ -0.34
TM9SF4-201ENST00000217315 CALRP27797 417 aaKnown RBP12.9□□□□□ -0.34
TM9SF4-201ENST00000217315 PLCB4Q15147 1175 aa12.9□□□□□ -0.34
TM9SF4-201ENST00000217315 MROH9Q5TGP6 573 aa12.9□□□□□ -0.34
TM9SF4-201ENST00000217315 ZDHHC24Q6UX98 284 aa12.9□□□□□ -0.34
TM9SF4-201ENST00000217315 LRRC6Q86X45 466 aa12.9□□□□□ -0.34
TM9SF4-201ENST00000217315 RIOX2Q8IUF8 465 aa12.9□□□□□ -0.34
TM9SF4-201ENST00000217315 ZCCHC9Q8N567 271 aaKnown RBP12.9□□□□□ -0.34
TM9SF4-201ENST00000217315 PPP1R13LQ8WUF5 828 aa12.9□□□□□ -0.34
TM9SF4-201ENST00000217315 PGBD4Q96DM1 585 aa12.9□□□□□ -0.34
TM9SF4-201ENST00000217315 TNIP3Q96KP6 325 aa12.9□□□□□ -0.34
TM9SF4-201ENST00000217315 ACO2Q99798 780 aaKnown RBP12.9□□□□□ -0.34
TM9SF4-201ENST00000217315 PCMTD2Q9NV79 361 aa12.9□□□□□ -0.34
TM9SF4-201ENST00000217315 TLK1Q9UKI8 766 aa12.9□□□□□ -0.34
TM9SF4-201ENST00000217315 INPP5FQ9Y2H2 1132 aa12.9□□□□□ -0.34
TM9SF4-201ENST00000217315 MROH7Q68CQ1 1323 aa12.9□□□□□ -0.34
TM9SF4-201ENST00000217315 FSBPO95073 299 aa12.9□□□□□ -0.35
TM9SF4-201ENST00000217315 MMP13P45452 471 aa12.9□□□□□ -0.35
TM9SF4-201ENST00000217315 PRPSAP1Q14558 356 aa12.9□□□□□ -0.35
TM9SF4-201ENST00000217315 EFHC2Q5JST6 749 aa12.9□□□□□ -0.35
TM9SF4-201ENST00000217315 ZNF560Q96MR9 790 aa12.9□□□□□ -0.35
TM9SF4-201ENST00000217315 NUDCD1Q96RS6 583 aa12.9□□□□□ -0.35
TM9SF4-201ENST00000217315 PPCSQ9HAB8 311 aa12.9□□□□□ -0.35
TM9SF4-201ENST00000217315 ADARB2Q9NS39 739 aaKnown RBP12.9□□□□□ -0.35
TM9SF4-201ENST00000217315 RPTORQ8N122 1335 aa12.89□□□□□ -0.35
TM9SF4-201ENST00000217315 DOCK2Q92608 1830 aa12.89□□□□□ -0.35
TM9SF4-201ENST00000217315 BANF1O75531 89 aa12.89□□□□□ -0.35
TM9SF4-201ENST00000217315 MICAL2O94851 1124 aa12.89□□□□□ -0.35
TM9SF4-201ENST00000217315 CYP2C8P10632 490 aa12.89□□□□□ -0.35
TM9SF4-201ENST00000217315 ZFXP17010 805 aaPredicted RBP12.89□□□□□ -0.35
TM9SF4-201ENST00000217315 TYK2P29597 1187 aa12.89□□□□□ -0.35
TM9SF4-201ENST00000217315 ARL13BQ3SXY8 428 aa12.89□□□□□ -0.35
TM9SF4-201ENST00000217315 MDH1BQ5I0G3 518 aa12.89□□□□□ -0.35
TM9SF4-201ENST00000217315 ZNF484Q5JVG2 852 aa12.89□□□□□ -0.35
TM9SF4-201ENST00000217315 SLC39A4Q6P5W5 647 aa12.89□□□□□ -0.35
TM9SF4-201ENST00000217315 DLK2Q6UY11 383 aa12.89□□□□□ -0.35
TM9SF4-201ENST00000217315 RSPH3Q86UC2 560 aa12.89□□□□□ -0.35
TM9SF4-201ENST00000217315 APPL2Q8NEU8 664 aa12.89□□□□□ -0.35
TM9SF4-201ENST00000217315 OPTNQ96CV9 577 aa12.89□□□□□ -0.35
TM9SF4-201ENST00000217315 CLMNQ96JQ2 1002 aa12.89□□□□□ -0.35
TM9SF4-201ENST00000217315 TUBB6Q9BUF5 446 aa12.89□□□□□ -0.35
TM9SF4-201ENST00000217315 GPR88Q9GZN0 384 aa12.89□□□□□ -0.35
TM9SF4-201ENST00000217315 SIK2Q9H0K1 926 aa12.89□□□□□ -0.35
TM9SF4-201ENST00000217315 CDT1Q9H211 546 aa12.89□□□□□ -0.35
TM9SF4-201ENST00000217315 ZDHHC18Q9NUE0 388 aa12.89□□□□□ -0.35
TM9SF4-201ENST00000217315 COL16A1Q07092 1604 aaPredicted RBP12.89□□□□□ -0.35
TM9SF4-201ENST00000217315 CCDC78A2IDD5 438 aa12.89□□□□□ -0.35
TM9SF4-201ENST00000217315 CCDC160A6NGH7 325 aa12.89□□□□□ -0.35
TM9SF4-201ENST00000217315 SNX3O60493 162 aa12.89□□□□□ -0.35
TM9SF4-201ENST00000217315 DIAPH2O60879 1101 aa12.89□□□□□ -0.35
TM9SF4-201ENST00000217315 SULT1E1P49888 294 aa12.89□□□□□ -0.35
TM9SF4-201ENST00000217315 HIRAP54198 1017 aaPredicted RBP12.89□□□□□ -0.35
TM9SF4-201ENST00000217315 SCUBE3Q8IX30 993 aa12.89□□□□□ -0.35
TM9SF4-201ENST00000217315 NSMCE1Q8WV22 266 aa12.89□□□□□ -0.35
TM9SF4-201ENST00000217315 CENPTQ96BT3 561 aa12.89□□□□□ -0.35
TM9SF4-201ENST00000217315 NACA2Q9H009 215 aa12.89□□□□□ -0.35
TM9SF4-201ENST00000217315 MROH8Q9H579 483 aa12.89□□□□□ -0.35
TM9SF4-201ENST00000217315 PPP2R3BQ9Y5P8 575 aa12.89□□□□□ -0.35
TM9SF4-201ENST00000217315 BTAF1O14981 1849 aa12.89□□□□□ -0.35
TM9SF4-201ENST00000217315 E2F8A0AVK6 867 aa12.89□□□□□ -0.35
TM9SF4-201ENST00000217315 O00370 1275 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms