RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 DDI1Q8WTU0 396 aa15.3■□□□□ 0.04
PTPRA-201ENST00000216877 OSBPL6Q9BZF3 934 aa15.3■□□□□ 0.04
PTPRA-201ENST00000216877 PCIF1Q9H4Z3 704 aa15.3■□□□□ 0.04
PTPRA-201ENST00000216877 ITGB1BP2Q9UKP3 347 aa15.3■□□□□ 0.04
PTPRA-201ENST00000216877 NCANO14594 1321 aa15.3■□□□□ 0.04
PTPRA-201ENST00000216877 SLIT2O94813 1529 aa15.3■□□□□ 0.04
PTPRA-201ENST00000216877 EIF3FO00303 357 aaPredicted RBP15.3■□□□□ 0.04
PTPRA-201ENST00000216877 RIMBP2O15034 1052 aa15.3■□□□□ 0.04
PTPRA-201ENST00000216877 ALAS1P13196 640 aa15.3■□□□□ 0.04
PTPRA-201ENST00000216877 RCVRNP35243 200 aa15.3■□□□□ 0.04
PTPRA-201ENST00000216877 CDH15P55291 814 aa15.3■□□□□ 0.04
PTPRA-201ENST00000216877 CENPUQ71F23 418 aa15.3■□□□□ 0.04
PTPRA-201ENST00000216877 CRLF3Q8IUI8 442 aa15.3■□□□□ 0.04
PTPRA-201ENST00000216877 TSPAN14Q8NG11 270 aa15.3■□□□□ 0.04
PTPRA-201ENST00000216877 CXorf38Q8TB03 319 aa15.3■□□□□ 0.04
PTPRA-201ENST00000216877 ZNF398Q8TD17 642 aa15.3■□□□□ 0.04
PTPRA-201ENST00000216877 FERMT1Q9BQL6 677 aa15.3■□□□□ 0.04
PTPRA-201ENST00000216877 KCTD10Q9H3F6 313 aa15.3■□□□□ 0.04
PTPRA-201ENST00000216877 GPCPD1Q9NPB8 672 aa15.3■□□□□ 0.04
PTPRA-201ENST00000216877 ATAD3AQ9NVI7 634 aa15.3■□□□□ 0.04
PTPRA-201ENST00000216877 NID2Q14112 1375 aa15.3■□□□□ 0.04
PTPRA-201ENST00000216877 CRTAMO95727 393 aa15.3■□□□□ 0.04
PTPRA-201ENST00000216877 CALCAP01258 141 aa15.3■□□□□ 0.04
PTPRA-201ENST00000216877 INHBAP08476 426 aa15.3■□□□□ 0.04
PTPRA-201ENST00000216877 STAT2P52630 851 aa15.3■□□□□ 0.04
PTPRA-201ENST00000216877 ARHGAP4P98171 946 aa15.3■□□□□ 0.04
PTPRA-201ENST00000216877 CHI3L2Q15782 390 aa15.3■□□□□ 0.04
PTPRA-201ENST00000216877 ZNF410Q86VK4 478 aa15.3■□□□□ 0.04
PTPRA-201ENST00000216877 HELQQ8TDG4 1101 aa15.3■□□□□ 0.04
PTPRA-201ENST00000216877 SKA1Q96BD8 255 aa15.3■□□□□ 0.04
PTPRA-201ENST00000216877 WRNIP1Q96S55 665 aa15.3■□□□□ 0.04
PTPRA-201ENST00000216877 PAFAH2Q99487 392 aa15.3■□□□□ 0.04
PTPRA-201ENST00000216877 HNRNPABQ99729 332 aaKnown RBP15.3■□□□□ 0.04
PTPRA-201ENST00000216877 OSBPL10Q9BXB5 764 aa15.3■□□□□ 0.04
PTPRA-201ENST00000216877 CEP44Q9C0F1 390 aa15.3■□□□□ 0.04
PTPRA-201ENST00000216877 LRRC19Q9H756 370 aa15.3■□□□□ 0.04
PTPRA-201ENST00000216877 PSTPIP2Q9H939 334 aa15.3■□□□□ 0.04
PTPRA-201ENST00000216877 SIX2Q9NPC8 291 aa15.3■□□□□ 0.04
PTPRA-201ENST00000216877 TBCCD1Q9NVR7 557 aa15.3■□□□□ 0.04
PTPRA-201ENST00000216877 SRP68Q9UHB9 627 aaKnown RBP15.3■□□□□ 0.04
PTPRA-201ENST00000216877 COPEO14579 308 aa15.29■□□□□ 0.04
PTPRA-201ENST00000216877 BMP3P12645 472 aa15.29■□□□□ 0.04
PTPRA-201ENST00000216877 KRT5P13647 590 aa15.29■□□□□ 0.04
PTPRA-201ENST00000216877 CDH2P19022 906 aaPredicted RBP15.29■□□□□ 0.04
PTPRA-201ENST00000216877 SSTR3P32745 418 aaPredicted RBP15.29■□□□□ 0.04
PTPRA-201ENST00000216877 NEK2P51955 445 aa15.29■□□□□ 0.04
PTPRA-201ENST00000216877 COBLL1Q53SF7 1204 aa15.29■□□□□ 0.04
PTPRA-201ENST00000216877 DCAF6Q58WW2 860 aa15.29■□□□□ 0.04
PTPRA-201ENST00000216877 CPNE9Q8IYJ1 553 aa15.29■□□□□ 0.04
PTPRA-201ENST00000216877 FHDC1Q9C0D6 1143 aaPredicted RBP15.29■□□□□ 0.04
PTPRA-201ENST00000216877 GNEQ9Y223 722 aaKnown RBP15.29■□□□□ 0.04
PTPRA-201ENST00000216877 E5RJQ4 531 aa15.29■□□□□ 0.04
PTPRA-201ENST00000216877 GMNNO75496 209 aa15.29■□□□□ 0.04
PTPRA-201ENST00000216877 ZBED1O96006 694 aa15.29■□□□□ 0.04
PTPRA-201ENST00000216877 KRT10P13645 584 aa15.29■□□□□ 0.04
PTPRA-201ENST00000216877 BCAP31P51572 246 aa15.29■□□□□ 0.04
PTPRA-201ENST00000216877 DYNLT1P63172 113 aa15.29■□□□□ 0.04
PTPRA-201ENST00000216877 KRT72Q14CN4 511 aa15.29■□□□□ 0.04
PTPRA-201ENST00000216877 RHPN2Q8IUC4 686 aa15.29■□□□□ 0.04
PTPRA-201ENST00000216877 HPS1Q92902 700 aa15.29■□□□□ 0.04
PTPRA-201ENST00000216877 ATP2A3Q93084 1043 aa15.29■□□□□ 0.04
PTPRA-201ENST00000216877 HAUS8Q9BT25 410 aa15.29■□□□□ 0.04
PTPRA-201ENST00000216877 DCLK3Q9C098 648 aa15.29■□□□□ 0.04
PTPRA-201ENST00000216877 XAB2Q9HCS7 855 aaKnown RBP15.29■□□□□ 0.04
PTPRA-201ENST00000216877 FAM13AO94988 1023 aa15.29■□□□□ 0.04
PTPRA-201ENST00000216877 NR4A1P22736 598 aa15.29■□□□□ 0.04
PTPRA-201ENST00000216877 PSMC2P35998 433 aaKnown RBP15.29■□□□□ 0.04
PTPRA-201ENST00000216877 FMO5P49326 533 aa15.29■□□□□ 0.04
PTPRA-201ENST00000216877 ALCAMQ13740 583 aa15.29■□□□□ 0.04
PTPRA-201ENST00000216877 TGFBIQ15582 683 aa15.29■□□□□ 0.04
PTPRA-201ENST00000216877 Q6ZNX1 250 aa15.29■□□□□ 0.04
PTPRA-201ENST00000216877 CENPSQ8N2Z9 138 aa15.29■□□□□ 0.04
PTPRA-201ENST00000216877 POLR3CQ9BUI4 534 aaPredicted RBP15.29■□□□□ 0.04
PTPRA-201ENST00000216877 C10orf88Q9H8K7 445 aa15.29■□□□□ 0.04
PTPRA-201ENST00000216877 SACM1LQ9NTJ5 587 aa15.29■□□□□ 0.04
PTPRA-201ENST00000216877 FAM32AQ9Y421 112 aaKnown RBP15.29■□□□□ 0.04
PTPRA-201ENST00000216877 KAT6AQ92794 2004 aa15.29■□□□□ 0.04
PTPRA-201ENST00000216877 C1orf232A0A0U1RR37 186 aa15.28■□□□□ 0.04
PTPRA-201ENST00000216877 WTIPA6NIX2 430 aaPredicted RBP15.28■□□□□ 0.04
PTPRA-201ENST00000216877 PIK3R2O00459 728 aa15.28■□□□□ 0.04
PTPRA-201ENST00000216877 SGPL1O95470 568 aa15.28■□□□□ 0.04
PTPRA-201ENST00000216877 ARL1P40616 181 aaPredicted RBP15.28■□□□□ 0.04
PTPRA-201ENST00000216877 NUP107P57740 925 aa15.28■□□□□ 0.04
PTPRA-201ENST00000216877 CETN1Q12798 172 aa15.28■□□□□ 0.04
PTPRA-201ENST00000216877 SMAD1Q15797 465 aaKnown RBP15.28■□□□□ 0.04
PTPRA-201ENST00000216877 EDRF1Q3B7T1 1238 aa15.28■□□□□ 0.04
PTPRA-201ENST00000216877 CBWD6Q4V339 395 aa15.28■□□□□ 0.04
PTPRA-201ENST00000216877 CBWD3Q5JTY5 395 aa15.28■□□□□ 0.04
PTPRA-201ENST00000216877 CBWD5Q5RIA9 395 aa15.28■□□□□ 0.04
PTPRA-201ENST00000216877 PERM1Q5SV97 790 aa15.28■□□□□ 0.04
PTPRA-201ENST00000216877 RHBDF2Q6PJF5 856 aa15.28■□□□□ 0.04
PTPRA-201ENST00000216877 NUDCD3Q8IVD9 361 aa15.28■□□□□ 0.04
PTPRA-201ENST00000216877 PLEKHO2Q8TD55 490 aa15.28■□□□□ 0.04
PTPRA-201ENST00000216877 KAT5Q92993 513 aa15.28■□□□□ 0.04
PTPRA-201ENST00000216877 RUSC1Q9BVN2 902 aa15.28■□□□□ 0.04
PTPRA-201ENST00000216877 THRAP10827 490 aa15.28■□□□□ 0.04
PTPRA-201ENST00000216877 PSMC3P17980 439 aa15.28■□□□□ 0.04
PTPRA-201ENST00000216877 S100A1P23297 94 aa15.28■□□□□ 0.04
PTPRA-201ENST00000216877 TKTP29401 623 aaKnown RBP15.28■□□□□ 0.04
PTPRA-201ENST00000216877 ADCY7P51828 1080 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms