RNA–Protein interactions for RNA: ENST00000215743.7

MMP11-201, Transcript of matrix metallopeptidase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP11, Length 2,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-201ENST00000215743 DUSP28Q4G0W2 176 aa20.81■□□□□ 0.92
MMP11-201ENST00000215743 RFX6Q8HWS3 928 aa20.81■□□□□ 0.92
MMP11-201ENST00000215743 ANKRD42Q8N9B4 389 aa20.81■□□□□ 0.92
MMP11-201ENST00000215743 KCTD6Q8NC69 237 aa20.81■□□□□ 0.92
MMP11-201ENST00000215743 NPLOC4Q8TAT6 608 aa20.81■□□□□ 0.92
MMP11-201ENST00000215743 FNIP1Q8TF40 1166 aa20.81■□□□□ 0.92
MMP11-201ENST00000215743 C2CD2Q9Y426 696 aa20.81■□□□□ 0.92
MMP11-201ENST00000215743 C5orf60A6NFR6 353 aa20.8■□□□□ 0.92
MMP11-201ENST00000215743 E5RJQ4 531 aa20.8■□□□□ 0.92
MMP11-201ENST00000215743 CDO1Q16878 200 aa20.8■□□□□ 0.92
MMP11-201ENST00000215743 GLRA4Q5JXX5 417 aa20.8■□□□□ 0.92
MMP11-201ENST00000215743 OR6B2Q6IFH4 312 aa20.8■□□□□ 0.92
MMP11-201ENST00000215743 ZNF467Q7Z7K2 595 aaPredicted RBP20.8■□□□□ 0.92
MMP11-201ENST00000215743 SLC35B2Q8TB61 432 aa20.8■□□□□ 0.92
MMP11-201ENST00000215743 NKD2Q969F2 451 aaPredicted RBP20.8■□□□□ 0.92
MMP11-201ENST00000215743 MCRS1Q96EZ8 462 aa20.8■□□□□ 0.92
MMP11-201ENST00000215743 CALN1Q9BXU9 219 aa20.8■□□□□ 0.92
MMP11-201ENST00000215743 CDHR5Q9HBB8 845 aa20.8■□□□□ 0.92
MMP11-201ENST00000215743 KCNK9Q9NPC2 374 aa20.8■□□□□ 0.92
MMP11-201ENST00000215743 MORF4L1Q9UBU8 362 aa20.8■□□□□ 0.92
MMP11-201ENST00000215743 DRG1Q9Y295 367 aaKnown RBP20.8■□□□□ 0.92
MMP11-201ENST00000215743 TMEM120BA0PK00 339 aa20.8■□□□□ 0.92
MMP11-201ENST00000215743 BANF1O75531 89 aa20.8■□□□□ 0.92
MMP11-201ENST00000215743 HMGCRP04035 888 aa20.8■□□□□ 0.92
MMP11-201ENST00000215743 ITGAVP06756 1048 aa20.8■□□□□ 0.92
MMP11-201ENST00000215743 GCLCP48506 637 aaPredicted RBP20.8■□□□□ 0.92
MMP11-201ENST00000215743 MYO1EQ12965 1108 aa20.8■□□□□ 0.92
MMP11-201ENST00000215743 GRB14Q14449 540 aa20.8■□□□□ 0.92
MMP11-201ENST00000215743 DGKDQ16760 1214 aa20.8■□□□□ 0.92
MMP11-201ENST00000215743 KYAT1Q16773 422 aa20.8■□□□□ 0.92
MMP11-201ENST00000215743 GOLGA7BQ2TAP0 167 aa20.8■□□□□ 0.92
MMP11-201ENST00000215743 PRAMEF19Q5SWL8 479 aa20.8■□□□□ 0.92
MMP11-201ENST00000215743 GKAP1Q5VSY0 366 aaPredicted RBP20.8■□□□□ 0.92
MMP11-201ENST00000215743 FAM183BPQ6ZVS7 135 aa20.8■□□□□ 0.92
MMP11-201ENST00000215743 TAX1BP1Q86VP1 789 aa20.8■□□□□ 0.92
MMP11-201ENST00000215743 LRRC34Q8IZ02 419 aa20.8■□□□□ 0.92
MMP11-201ENST00000215743 CACNA2D3Q8IZS8 1091 aa20.8■□□□□ 0.92
MMP11-201ENST00000215743 PPM1EQ8WY54 764 aa20.8■□□□□ 0.92
MMP11-201ENST00000215743 CABS1Q96KC9 395 aa20.8■□□□□ 0.92
MMP11-201ENST00000215743 ZMAT2Q96NC0 199 aaKnown RBP20.8■□□□□ 0.92
MMP11-201ENST00000215743 ZNF317Q96PQ6 595 aaPredicted RBP20.8■□□□□ 0.92
MMP11-201ENST00000215743 TINF2Q9BSI4 451 aa20.8■□□□□ 0.92
MMP11-201ENST00000215743 EIF2AQ9BY44 585 aaKnown RBP20.8■□□□□ 0.92
MMP11-201ENST00000215743 TUBGCP4Q9UGJ1 667 aa20.8■□□□□ 0.92
MMP11-201ENST00000215743 RNF8O76064 485 aa20.79■□□□□ 0.92
MMP11-201ENST00000215743 GRM5P41594 1212 aa20.79■□□□□ 0.92
MMP11-201ENST00000215743 GABRB2P47870 512 aa20.79■□□□□ 0.92
MMP11-201ENST00000215743 INCA1Q0VD86 236 aa20.79■□□□□ 0.92
MMP11-201ENST00000215743 C15orf59Q2T9L4 293 aaPredicted RBP20.79■□□□□ 0.92
MMP11-201ENST00000215743 FAM182AQ5T1J6 154 aa20.79■□□□□ 0.92
MMP11-201ENST00000215743 TRNP1Q6NT89 227 aa20.79■□□□□ 0.92
MMP11-201ENST00000215743 VSTM1Q6UX27 236 aa20.79■□□□□ 0.92
MMP11-201ENST00000215743 DYDC1Q8WWB3 177 aa20.79■□□□□ 0.92
MMP11-201ENST00000215743 LENG1Q96BZ8 264 aaPredicted RBP20.79■□□□□ 0.92
MMP11-201ENST00000215743 FAXDC2Q96IV6 333 aa20.79■□□□□ 0.92
MMP11-201ENST00000215743 PEBP4Q96S96 227 aa20.79■□□□□ 0.92
MMP11-201ENST00000215743 OSMRQ99650 979 aa20.79■□□□□ 0.92
MMP11-201ENST00000215743 MRPL45Q9BRJ2 306 aaKnown RBP20.79■□□□□ 0.92
MMP11-201ENST00000215743 APOL6Q9BWW8 343 aa20.79■□□□□ 0.92
MMP11-201ENST00000215743 NT5C1AQ9BXI3 368 aa20.79■□□□□ 0.92
MMP11-201ENST00000215743 FAM49BQ9NUQ9 324 aa20.79■□□□□ 0.92
MMP11-201ENST00000215743 USP18Q9UMW8 372 aa20.79■□□□□ 0.92
MMP11-201ENST00000215743 SNX9Q9Y5X1 595 aa20.79■□□□□ 0.92
MMP11-201ENST00000215743 CITO14578 2027 aa20.79■□□□□ 0.92
MMP11-201ENST00000215743 IQCA1LA6NCM1 817 aa20.79■□□□□ 0.92
MMP11-201ENST00000215743 VIMP08670 466 aaKnown RBP20.79■□□□□ 0.92
MMP11-201ENST00000215743 GSCP56915 257 aaPredicted RBP20.79■□□□□ 0.92
MMP11-201ENST00000215743 GAD2Q05329 585 aa20.79■□□□□ 0.92
MMP11-201ENST00000215743 RNASEH2BQ5TBB1 312 aaKnown RBP20.79■□□□□ 0.92
MMP11-201ENST00000215743 C6orf89Q6UWU4 347 aa20.79■□□□□ 0.92
MMP11-201ENST00000215743 CATSPER4Q7RTX7 472 aa20.79■□□□□ 0.92
MMP11-201ENST00000215743 PCDH9Q9HC56 1237 aa20.79■□□□□ 0.92
MMP11-201ENST00000215743 NAALADL1Q9UQQ1 740 aa20.79■□□□□ 0.92
MMP11-201ENST00000215743 ATXN2Q99700 1313 aaKnown RBP20.78■□□□□ 0.92
MMP11-201ENST00000215743 DYNC1LI2O43237 492 aaPredicted RBP20.78■□□□□ 0.92
MMP11-201ENST00000215743 TRUB2O95900 331 aaKnown RBP20.78■□□□□ 0.92
MMP11-201ENST00000215743 ATP5DP30049 168 aa20.78■□□□□ 0.92
MMP11-201ENST00000215743 MMRN1Q13201 1228 aa20.78■□□□□ 0.92
MMP11-201ENST00000215743 MTM1Q13496 603 aa20.78■□□□□ 0.92
MMP11-201ENST00000215743 TMED2Q15363 201 aa20.78■□□□□ 0.92
MMP11-201ENST00000215743 BBS12Q6ZW61 710 aa20.78■□□□□ 0.92
MMP11-201ENST00000215743 ANKRD23Q86SG2 305 aa20.78■□□□□ 0.92
MMP11-201ENST00000215743 ACOT1Q86TX2 421 aa20.78■□□□□ 0.92
MMP11-201ENST00000215743 ZNF410Q86VK4 478 aa20.78■□□□□ 0.92
MMP11-201ENST00000215743 C18orf25Q96B23 403 aaPredicted RBP20.78■□□□□ 0.92
MMP11-201ENST00000215743 GPD1P21695 349 aa20.78■□□□□ 0.92
MMP11-201ENST00000215743 PPP1R26Q5T8A7 1209 aaPredicted RBP20.78■□□□□ 0.92
MMP11-201ENST00000215743 PLEKHH3Q7Z736 793 aa20.78■□□□□ 0.92
MMP11-201ENST00000215743 RELL1Q8IUW5 271 aa20.78■□□□□ 0.92
MMP11-201ENST00000215743 SRRM1Q8IYB3 904 aaKnown RBP20.78■□□□□ 0.92
MMP11-201ENST00000215743 ZBED8Q8IZ13 594 aa20.78■□□□□ 0.92
MMP11-201ENST00000215743 RXFP2Q8WXD0 754 aa20.78■□□□□ 0.92
MMP11-201ENST00000215743 MRRFQ96E11 262 aaKnown RBP20.78■□□□□ 0.92
MMP11-201ENST00000215743 ABHD16BQ9H3Z7 469 aa20.78■□□□□ 0.92
MMP11-201ENST00000215743 SLC45A1Q9Y2W3 748 aa20.78■□□□□ 0.92
MMP11-201ENST00000215743 KAT6AQ92794 2004 aa20.77■□□□□ 0.92
MMP11-201ENST00000215743 PFKMP08237 780 aa20.77■□□□□ 0.92
MMP11-201ENST00000215743 BRAFP15056 766 aa20.77■□□□□ 0.92
MMP11-201ENST00000215743 HOXA11P31270 313 aaPredicted RBP20.77■□□□□ 0.92
MMP11-201ENST00000215743 NRLP54845 237 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms