RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 PCDHGC5Q9Y5F6 944 aa12.64□□□□□ -0.39
CHPF2-201ENST00000035307 ANKRD31Q8N7Z5 1873 aa12.64□□□□□ -0.39
CHPF2-201ENST00000035307 A0A1B0GUA9 196 aa12.64□□□□□ -0.39
CHPF2-201ENST00000035307 RASSF10A6NK89 507 aa12.64□□□□□ -0.39
CHPF2-201ENST00000035307 NT5C1B-RDH14C9J2C7 533 aa12.64□□□□□ -0.39
CHPF2-201ENST00000035307 NCF2P19878 526 aaPredicted RBP12.64□□□□□ -0.39
CHPF2-201ENST00000035307 EIF4BP23588 611 aaKnown RBP12.64□□□□□ -0.39
CHPF2-201ENST00000035307 MAGEA4P43358 317 aa12.64□□□□□ -0.39
CHPF2-201ENST00000035307 ZNF844Q08AG5 666 aa12.64□□□□□ -0.39
CHPF2-201ENST00000035307 MAP7D1Q3KQU3 841 aa12.64□□□□□ -0.39
CHPF2-201ENST00000035307 FEZF2Q8TBJ5 459 aa12.64□□□□□ -0.39
CHPF2-201ENST00000035307 CRYGNQ8WXF5 182 aa12.64□□□□□ -0.39
CHPF2-201ENST00000035307 EXT2Q93063 718 aa12.64□□□□□ -0.39
CHPF2-201ENST00000035307 CEP41Q9BYV8 373 aa12.64□□□□□ -0.39
CHPF2-201ENST00000035307 DHX33Q9H6R0 707 aaKnown RBP12.64□□□□□ -0.39
CHPF2-201ENST00000035307 KLHL8Q9P2G9 620 aaPredicted RBP12.64□□□□□ -0.39
CHPF2-201ENST00000035307 TCRBV7S2A1N4TA0A589 114 aa12.63□□□□□ -0.39
CHPF2-201ENST00000035307 ASAP2O43150 1006 aa12.63□□□□□ -0.39
CHPF2-201ENST00000035307 BNIP3LO60238 219 aa12.63□□□□□ -0.39
CHPF2-201ENST00000035307 ZC3H11AO75152 810 aaKnown RBP eCLIP12.63□□□□□ -0.39
CHPF2-201ENST00000035307 MLH1P40692 756 aa12.63□□□□□ -0.39
CHPF2-201ENST00000035307 ENOSF1Q7L5Y1 443 aa12.63□□□□□ -0.39
CHPF2-201ENST00000035307 RYBPQ8N488 228 aaPredicted RBP12.63□□□□□ -0.39
CHPF2-201ENST00000035307 ADAM32Q8TC27 787 aa12.63□□□□□ -0.39
CHPF2-201ENST00000035307 ACTRT1Q8TDG2 376 aa12.63□□□□□ -0.39
CHPF2-201ENST00000035307 GTF3C2Q8WUA4 911 aaPredicted RBP12.63□□□□□ -0.39
CHPF2-201ENST00000035307 DEFB118Q96PH6 123 aa12.63□□□□□ -0.39
CHPF2-201ENST00000035307 ERVK-5Q9HDB9 667 aa12.63□□□□□ -0.39
CHPF2-201ENST00000035307 NPHS2Q9NP85 383 aa12.63□□□□□ -0.39
CHPF2-201ENST00000035307 COPEO14579 308 aa12.63□□□□□ -0.39
CHPF2-201ENST00000035307 ETS1P14921 441 aa12.63□□□□□ -0.39
CHPF2-201ENST00000035307 ARHGAP1Q07960 439 aa12.63□□□□□ -0.39
CHPF2-201ENST00000035307 ANKRD23Q86SG2 305 aa12.63□□□□□ -0.39
CHPF2-201ENST00000035307 ZNF606Q8WXB4 792 aa12.63□□□□□ -0.39
CHPF2-201ENST00000035307 ACO2Q99798 780 aaKnown RBP12.63□□□□□ -0.39
CHPF2-201ENST00000035307 TRAIPQ9BWF2 469 aa12.63□□□□□ -0.39
CHPF2-201ENST00000035307 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.63□□□□□ -0.39
CHPF2-201ENST00000035307 TRMT13Q9NUP7 481 aaKnown RBP12.63□□□□□ -0.39
CHPF2-201ENST00000035307 MAFBQ9Y5Q3 323 aaPredicted RBP12.63□□□□□ -0.39
CHPF2-201ENST00000035307 CDY2AQ9Y6F7 541 aa12.63□□□□□ -0.39
CHPF2-201ENST00000035307 DDX60LQ5H9U9 1706 aaKnown RBP12.63□□□□□ -0.39
CHPF2-201ENST00000035307 MYH11P35749 1972 aa12.63□□□□□ -0.39
CHPF2-201ENST00000035307 RRN3P2A6NIE6 340 aa12.63□□□□□ -0.39
CHPF2-201ENST00000035307 SLC15A5A6NIM6 579 aa12.63□□□□□ -0.39
CHPF2-201ENST00000035307 GOLGA8CPA6NN73 597 aa12.63□□□□□ -0.39
CHPF2-201ENST00000035307 KBTBD13C9JR72 458 aa12.63□□□□□ -0.39
CHPF2-201ENST00000035307 PJA2O43164 708 aa12.63□□□□□ -0.39
CHPF2-201ENST00000035307 ATP9BO43861 1147 aa12.63□□□□□ -0.39
CHPF2-201ENST00000035307 RASSF2P50749 326 aa12.63□□□□□ -0.39
CHPF2-201ENST00000035307 SCNN1GP51170 649 aa12.63□□□□□ -0.39
CHPF2-201ENST00000035307 SLC20A2Q08357 652 aa12.63□□□□□ -0.39
CHPF2-201ENST00000035307 LDLRAD1Q5T700 205 aa12.63□□□□□ -0.39
CHPF2-201ENST00000035307 C3orf62Q6ZUJ4 267 aa12.63□□□□□ -0.39
CHPF2-201ENST00000035307 PPP4R1Q8TF05 950 aa12.63□□□□□ -0.39
CHPF2-201ENST00000035307 CGRRF1Q99675 332 aa12.63□□□□□ -0.39
CHPF2-201ENST00000035307 ASNSD1Q9NWL6 643 aa12.63□□□□□ -0.39
CHPF2-201ENST00000035307 NFASCO94856 1347 aa12.63□□□□□ -0.39
CHPF2-201ENST00000035307 RPTORQ8N122 1335 aa12.63□□□□□ -0.39
CHPF2-201ENST00000035307 ASGR1P07306 291 aa12.62□□□□□ -0.39
CHPF2-201ENST00000035307 DNAJB2P25686 324 aa12.62□□□□□ -0.39
CHPF2-201ENST00000035307 CPA2P48052 419 aa12.62□□□□□ -0.39
CHPF2-201ENST00000035307 NDST1P52848 882 aa12.62□□□□□ -0.39
CHPF2-201ENST00000035307 MAP3K10Q02779 954 aa12.62□□□□□ -0.39
CHPF2-201ENST00000035307 USP33Q8TEY7 942 aa12.62□□□□□ -0.39
CHPF2-201ENST00000035307 ADAM2Q99965 735 aa12.62□□□□□ -0.39
CHPF2-201ENST00000035307 SHCBP1LQ9BZQ2 653 aa12.62□□□□□ -0.39
CHPF2-201ENST00000035307 KAT6AQ92794 2004 aa12.62□□□□□ -0.39
CHPF2-201ENST00000035307 LY75O60449 1722 aa12.62□□□□□ -0.39
CHPF2-201ENST00000035307 F8VP50 259 aa12.62□□□□□ -0.39
CHPF2-201ENST00000035307 CFLARO15519 480 aa12.62□□□□□ -0.39
CHPF2-201ENST00000035307 MUTP22033 750 aa12.62□□□□□ -0.39
CHPF2-201ENST00000035307 ROR1Q01973 937 aa12.62□□□□□ -0.39
CHPF2-201ENST00000035307 NOGQ13253 232 aa12.62□□□□□ -0.39
CHPF2-201ENST00000035307 GOLGA7BQ2TAP0 167 aa12.62□□□□□ -0.39
CHPF2-201ENST00000035307 SLC39A4Q6P5W5 647 aa12.62□□□□□ -0.39
CHPF2-201ENST00000035307 C4orf50Q6ZRC1 276 aa12.62□□□□□ -0.39
CHPF2-201ENST00000035307 APPL2Q8NEU8 664 aa12.62□□□□□ -0.39
CHPF2-201ENST00000035307 ECT2Q9H8V3 914 aa12.62□□□□□ -0.39
CHPF2-201ENST00000035307 TSR3Q9UJK0 312 aaKnown RBP12.62□□□□□ -0.39
CHPF2-201ENST00000035307 KRT7P08729 469 aa12.62□□□□□ -0.39
CHPF2-201ENST00000035307 NCKAP1LP55160 1127 aa12.62□□□□□ -0.39
CHPF2-201ENST00000035307 TMC3Q7Z5M5 1100 aa12.62□□□□□ -0.39
CHPF2-201ENST00000035307 METTL23Q86XA0 190 aa12.62□□□□□ -0.39
CHPF2-201ENST00000035307 SCUBE3Q8IX30 993 aa12.62□□□□□ -0.39
CHPF2-201ENST00000035307 KIRREL3Q8IZU9 778 aa12.62□□□□□ -0.39
CHPF2-201ENST00000035307 KATNAL1Q9BW62 490 aa12.62□□□□□ -0.39
CHPF2-201ENST00000035307 CD248Q9HCU0 757 aa12.62□□□□□ -0.39
CHPF2-201ENST00000035307 HCRTO43612 131 aa12.62□□□□□ -0.39
CHPF2-201ENST00000035307 CNMDO75829 334 aa12.62□□□□□ -0.39
CHPF2-201ENST00000035307 FAM107AO95990 144 aa12.62□□□□□ -0.39
CHPF2-201ENST00000035307 CPB1P15086 417 aa12.62□□□□□ -0.39
CHPF2-201ENST00000035307 ACO1P21399 889 aaKnown RBP12.62□□□□□ -0.39
CHPF2-201ENST00000035307 GNL1P36915 607 aaPredicted RBP12.62□□□□□ -0.39
CHPF2-201ENST00000035307 PTENP60484 403 aa12.62□□□□□ -0.39
CHPF2-201ENST00000035307 SAMD3Q8N6K7 520 aa12.62□□□□□ -0.39
CHPF2-201ENST00000035307 CDKL2Q92772 493 aa12.62□□□□□ -0.39
CHPF2-201ENST00000035307 CCDC124Q96CT7 223 aaKnown RBP12.62□□□□□ -0.39
CHPF2-201ENST00000035307 RNF39Q9H2S5 420 aa12.62□□□□□ -0.39
CHPF2-201ENST00000035307 TMBIM4Q9HC24 238 aa12.62□□□□□ -0.39
CHPF2-201ENST00000035307 ABI2Q9NYB9 513 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms