RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 WtipQ7TQJ8 398 aa27.06■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Kctd12bQ8C7J6 292 aa27.06■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Ube2q2Q8K2Z8 378 aa27.06■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Timd2Q8R183 305 aa27.06■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Ca9Q8VHB5 437 aa27.06■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Trpc2Q9R244 1172 aa27.06■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Plxna1P70206 1894 aa27.06■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Ttc3O88196 1979 aaKnown RBP27.05■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Xbp1O35426 267 aa27.05■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Lilrb4Q64281 335 aa27.05■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Alg1Q921Q3 482 aa27.05■■□□□ 1.92
Tpm1-216ENSMUST00000113707 GarsQ9CZD3 729 aaKnown RBP27.05■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Ttc33Q9D6K7 262 aa27.05■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Doc2gQ9ESN1 387 aa27.05■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Gfra4Q9JJT2 260 aa27.05■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Krt27Q9Z320 448 aa27.05■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Apold1E9Q0X2 246 aa27.04■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Per2O54943 1257 aa27.04■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Il27raO70394 623 aa27.04■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Gdap1O88741 358 aa27.04■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Runx2Q08775 607 aa27.04■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Bpifb5Q3UQ05 490 aa27.04■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Ccdc92bQ5SUE3 299 aa27.04■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Zdhhc17Q80TN5 632 aa27.04■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Il36gQ8R460 164 aa27.04■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Gtf2ird1Q9JI57 1104 aaKnown RBP27.04■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Piwil1Q9JMB7 862 aa27.04■■□□□ 1.92
Tpm1-216ENSMUST00000113707 SrcapA0A087WQ44 3271 aa27.04■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Gm6133B2RY53 190 aa27.04■■□□□ 1.92
Tpm1-216ENSMUST00000113707 F6Y6L6 278 aa27.04■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Rdh7O88451 316 aa27.04■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Glud1P26443 558 aaKnown RBP27.04■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Rab34Q64008 259 aa27.04■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Prl3a1Q78Y73 227 aa27.04■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Arhgef33Q8BW86 850 aa27.04■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Dennd1aQ8K382 1016 aa27.04■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Dhx58Q99J87 678 aa27.04■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Gm45713A0A1B0GS68 446 aa27.03■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Dennd5bA2RSQ0 1274 aa27.03■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Apol7bB1AQP7 369 aa27.03■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Apol7eQ3UZ24 369 aa27.03■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Syn2Q64332 586 aa27.03■■□□□ 1.92
Tpm1-216ENSMUST00000113707 EfsQ64355 560 aa27.03■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Olfr1105Q7TR58 312 aa27.03■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Nipal1Q8BMW7 416 aa27.03■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Ugt3a2Q8JZZ0 523 aa27.03■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Fam114a2Q8VE88 497 aa27.03■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Pdxdc1Q99K01 787 aaKnown RBP27.03■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Mgea5Q9EQQ9 916 aa27.03■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Fpr-rs4A4FUQ5 323 aa27.02■■□□□ 1.92
Tpm1-216ENSMUST00000113707 2610008E11RikG3X964 669 aa27.02■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Mup13L7N222 235 aa27.02■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Hsd17b2P51658 381 aa27.02■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Stt3bQ3TDQ1 823 aa27.02■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Kctd19Q562E2 927 aa27.02■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Mxd4Q60948 209 aa27.02■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Papss1Q60967 624 aa27.02■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Tbc1d12Q6A039 696 aa27.02■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Tmem220Q8BP07 167 aa27.02■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Serpina3bQ8BYY9 420 aa27.02■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Fam118bQ8C569 351 aa27.02■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Lsm14bQ8CGC4 385 aaKnown RBP27.02■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Smtnl2Q8CI12 456 aa27.02■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Gle1Q8R322 699 aa27.02■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Spns2Q91VM4 549 aa27.02■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Afg3l1Q920A7 789 aaKnown RBP27.02■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Kdelr1Q99JH8 212 aa27.02■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Hars2Q99KK9 505 aa27.02■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Fuca1Q99LJ1 452 aa27.02■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Gimap3Q99MI6 301 aa27.02■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Zcchc8Q9CYA6 709 aaKnown RBP27.02■■□□□ 1.92
Tpm1-216ENSMUST00000113707 DonsonQ9QXP4 560 aa27.02■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Speer2E9Q9U2 264 aa27.02■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Ercc5P35689 1170 aa27.02■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Zrsr2Q62377 462 aaKnown RBP27.02■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Dnajc16Q80TN4 772 aa27.02■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Bicd1Q8BR07 835 aa27.02■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Dus1lQ8C2P3 475 aa27.02■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Plekhh3Q8VCE9 796 aa27.02■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Sdcbp2Q99JZ0 292 aa27.02■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Cdk5rap3Q99LM2 503 aa27.02■■□□□ 1.92
Tpm1-216ENSMUST00000113707 MutyhQ99P21 515 aa27.02■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Map2k5Q9WVS7 448 aa27.02■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Zc3h4Q6ZPZ3 1304 aaKnown RBP27.01■■□□□ 1.91
Tpm1-216ENSMUST00000113707 Smpd1Q04519 627 aa27.01■■□□□ 1.91
Tpm1-216ENSMUST00000113707 Adad1Q5SUE7 619 aa27.01■■□□□ 1.91
Tpm1-216ENSMUST00000113707 Uimc1Q5U5Q9 727 aa27.01■■□□□ 1.91
Tpm1-216ENSMUST00000113707 Tsga10Q6NY15 697 aa27.01■■□□□ 1.91
Tpm1-216ENSMUST00000113707 Zdhhc19Q810M5 347 aa27.01■■□□□ 1.91
Tpm1-216ENSMUST00000113707 Ankrd45Q810N6 248 aa27.01■■□□□ 1.91
Tpm1-216ENSMUST00000113707 Rassf10Q8BL43 508 aa27.01■■□□□ 1.91
Tpm1-216ENSMUST00000113707 Enpp4Q8BTJ4 456 aa27.01■■□□□ 1.91
Tpm1-216ENSMUST00000113707 Apol7cQ8C6E1 369 aa27.01■■□□□ 1.91
Tpm1-216ENSMUST00000113707 Tp53inp2Q8CFU8 221 aa27.01■■□□□ 1.91
Tpm1-216ENSMUST00000113707 Mtss1Q8R1S4 759 aa27.01■■□□□ 1.91
Tpm1-216ENSMUST00000113707 Rnf135Q9CWS1 417 aa27.01■■□□□ 1.91
Tpm1-216ENSMUST00000113707 Cuedc2Q9CXX9 284 aa27.01■■□□□ 1.91
Tpm1-216ENSMUST00000113707 Cacng4Q9JJV4 327 aa27.01■■□□□ 1.91
Tpm1-216ENSMUST00000113707 Gpr161B2RPY5 545 aa27■■□□□ 1.91
Tpm1-216ENSMUST00000113707 PfkmP47857 780 aaKnown RBP27■■□□□ 1.91
Retrieved 100 of 22,080 RNA–protein pairs in 19.5 ms