RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Mup2P11589 180 aa16.18■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Gtf2bP62915 316 aa16.18■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Spata20Q80YT5 790 aa16.18■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 NcaphQ8C156 731 aa16.18■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Prr33Q8C494 260 aa16.18■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Pglyrp2Q8VCS0 530 aa16.18■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Rgs9bpQ148R9 237 aa16.18■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Hddc2Q3SXD3 199 aa16.18■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Wdr36Q3TAQ9 899 aaKnown RBP16.18■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Nat8lQ3UGX3 299 aa16.18■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Tgoln2Q62314 363 aa16.18■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Ankzf1Q80UU1 748 aaKnown RBP16.18■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Slc9b1Q8C0X2 565 aa16.18■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Trpv6Q91WD2 767 aa16.18■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Pdxdc1Q99K01 787 aaKnown RBP16.18■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Fbxo16Q9QZM9 334 aa16.18■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Hic1Q9R1Y5 733 aa16.18■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Cd97Q9Z0M6 818 aa16.18■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Ankfn1A0A140LIW7 1083 aa16.18■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 SarsP26638 512 aaKnown RBP16.18■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 RbakQ8BQC8 711 aa16.18■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Shcbp1Q9Z179 668 aa16.18■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Wdr91Q7TMQ7 748 aa16.18■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 4932411N23RikQ8C0S0 470 aa16.18■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 DtnaQ9D2N4 746 aa16.18■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Tlr9Q9EQU3 1032 aa16.18■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Tbx20Q9ES03 445 aa16.18■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 PolkQ9QUG2 852 aa16.18■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Entpd5Q9WUZ9 427 aa16.18■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Atp6v0a1Q9Z1G4 839 aaKnown RBP16.18■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Ace3D0G895 737 aa16.17■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Bcar1Q61140 874 aa16.17■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Rpp40Q8R1F9 363 aa16.17■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Ubxn6Q99PL6 442 aa16.17■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Klrc1Q9Z202 244 aa16.17■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Zfp626A0A0U1RQ84 676 aa16.17■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Myl2P51667 166 aa16.17■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Tex11Q14AT2 947 aa16.17■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Q3KNL4 93 aa16.17■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Fbxo39Q5NBU5 443 aa16.17■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Gba2Q69ZF3 918 aa16.17■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 IgflQ6B9Z0 140 aa16.17■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Zfp943Q6NZP4 507 aa16.17■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Baiap2l2Q80Y61 522 aa16.17■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Ccdc151Q8BSN3 593 aa16.17■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 HnmtQ91VF2 295 aa16.17■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Rrp15Q9CYX7 281 aaKnown RBP16.17■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Cep72Q9D3R3 646 aa16.17■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Sapcd2Q9D818 391 aa16.17■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Usp35M0QWN7 1009 aa16.17■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Npas2P97460 816 aa16.17■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Smcr8Q3UMB5 935 aa16.17■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Bpifb5Q3UQ05 490 aa16.17■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Bag5Q8CI32 447 aa16.17■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 IntS13Q8QZV7 732 aa16.17■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Fbxw7Q8VBV4 629 aa16.17■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 PmpcbQ9CXT8 489 aa16.17■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Rab11fip1Q9D620 645 aa16.17■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Q9D9D9 101 aa16.17■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Lrrc73B2RWC4 316 aa16.17■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Gm1141B9EJU1 475 aa16.17■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Lipo2D3YY49 398 aa16.17■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Tnfrsf11aO35305 625 aa16.17■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Ppargc1aO70343 797 aa16.17■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Pgk2P09041 417 aa16.17■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Prl3b1P09586 222 aa16.17■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 SelpQ01102 768 aa16.17■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Ly9Q01965 654 aa16.17■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Msantd2Q6NZR2 559 aa16.17■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Gm8113E0CXS8 587 aa16.16■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Anxa8O35640 327 aa16.16■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Anxa5P48036 319 aa16.16■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Parp3Q3ULW8 533 aa16.16■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Hif1aQ61221 836 aaKnown RBP16.16■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Arl13bQ640N2 427 aa16.16■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Tiam2Q6ZPF3 1715 aa16.16■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Fbxl13Q8CDU4 790 aa16.16■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 LactbQ9EP89 551 aa16.16■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Zfyve28Q6ZPK7 905 aa16.16■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 MyocdQ8VIM5 935 aa16.16■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 PawrQ925B0 333 aa16.16■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 C1qtnf1Q9QXP7 281 aa16.16■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Gdpd4Q3TT99 632 aa16.16■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Moxd2Q7TT41 619 aa16.16■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Pip4k2cQ91XU3 421 aa16.16■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Rhobtb1Q9DAK3 695 aa16.16■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Apobec2Q9WV35 224 aa16.16■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Kif6E9PX57 802 aa16.16■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Klrk1O54709 232 aa16.16■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Pdk4O70571 412 aa16.16■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Itih3Q61704 889 aa16.16■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Styk1Q6J9G1 429 aa16.16■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 HpseQ6YGZ1 535 aa16.16■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 VcpkmtQ8C436 228 aa16.16■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Ifi205aQ8CGE8 404 aa16.16■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Vps39Q8R5L3 886 aa16.16■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Ccdc130Q9D516 385 aa16.16■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Neu2Q9JMH3 379 aa16.16■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Plod3Q9R0E1 741 aa16.16■□□□□ 0.18
Ccdc88b-201ENSMUST00000113440 Krt28A6BLY7 462 aa16.15■□□□□ 0.18
Retrieved 100 of 22,080 RNA–protein pairs in 24.7 ms