RNA–Protein interactions for RNA: ENSMUST00000112736.7

Vps4b-202, Transcript of Vacuolar protein sorting-associated protein 4B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vps4b, Length 4,539 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4b-202ENSMUST00000112736 Pnma2Q8BHK0 365 aa13.34□□□□□ -0.27
Vps4b-202ENSMUST00000112736 Trmt11Q9CWH5 460 aa13.34□□□□□ -0.27
Vps4b-202ENSMUST00000112736 Polr3hQ9D2C6 204 aaKnown RBP13.34□□□□□ -0.27
Vps4b-202ENSMUST00000112736 N4bp2F8VQG7 1678 aaKnown RBP13.34□□□□□ -0.27
Vps4b-202ENSMUST00000112736 Gm4871D3Z0W7 314 aa13.34□□□□□ -0.27
Vps4b-202ENSMUST00000112736 Tlk2O55047 718 aa13.34□□□□□ -0.27
Vps4b-202ENSMUST00000112736 Stx1bP61264 288 aa13.34□□□□□ -0.27
Vps4b-202ENSMUST00000112736 Abhd15Q5F2F2 459 aa13.34□□□□□ -0.27
Vps4b-202ENSMUST00000112736 Rbl2Q64700 1135 aa13.34□□□□□ -0.27
Vps4b-202ENSMUST00000112736 Stx3Q64704 289 aa13.34□□□□□ -0.27
Vps4b-202ENSMUST00000112736 Prdm4Q80V63 803 aa13.34□□□□□ -0.27
Vps4b-202ENSMUST00000112736 Pdxdc1Q99K01 787 aaKnown RBP13.34□□□□□ -0.27
Vps4b-202ENSMUST00000112736 Anxa9Q9JHQ0 345 aa13.34□□□□□ -0.27
Vps4b-202ENSMUST00000112736 Tnip3A0A1D5RMN0 279 aa13.33□□□□□ -0.27
Vps4b-202ENSMUST00000112736 Gm7694J3QNH8 270 aa13.33□□□□□ -0.27
Vps4b-202ENSMUST00000112736 Ppargc1aO70343 797 aa13.33□□□□□ -0.27
Vps4b-202ENSMUST00000112736 WapP01173 134 aa13.33□□□□□ -0.27
Vps4b-202ENSMUST00000112736 Ccnd3P30282 292 aa13.33□□□□□ -0.27
Vps4b-202ENSMUST00000112736 Atp6v1b2P62814 511 aa13.33□□□□□ -0.27
Vps4b-202ENSMUST00000112736 Mgat3Q10470 538 aa13.33□□□□□ -0.27
Vps4b-202ENSMUST00000112736 Ccndbp1Q3TVC7 356 aa13.33□□□□□ -0.27
Vps4b-202ENSMUST00000112736 Gcnt3Q5JCT0 437 aa13.33□□□□□ -0.27
Vps4b-202ENSMUST00000112736 Xpnpep1Q6P1B1 623 aa13.33□□□□□ -0.27
Vps4b-202ENSMUST00000112736 DgkqQ6P5E8 934 aa13.33□□□□□ -0.27
Vps4b-202ENSMUST00000112736 Gm7247Q6UY52 187 aa13.33□□□□□ -0.27
Vps4b-202ENSMUST00000112736 Zswim6Q80TB7 1207 aa13.33□□□□□ -0.27
Vps4b-202ENSMUST00000112736 Q80Y73 168 aa13.33□□□□□ -0.27
Vps4b-202ENSMUST00000112736 Gtse1Q8R080 741 aa13.33□□□□□ -0.27
Vps4b-202ENSMUST00000112736 Nphs1Q9QZS7 1256 aa13.33□□□□□ -0.27
Vps4b-202ENSMUST00000112736 Myo5bP21271 1818 aa13.33□□□□□ -0.28
Vps4b-202ENSMUST00000112736 C5P06684 1680 aa13.33□□□□□ -0.28
Vps4b-202ENSMUST00000112736 Vmn2r15L7N2A0 855 aa13.33□□□□□ -0.28
Vps4b-202ENSMUST00000112736 PtgisO35074 501 aa13.33□□□□□ -0.28
Vps4b-202ENSMUST00000112736 Psg29Q3URN6 468 aa13.33□□□□□ -0.28
Vps4b-202ENSMUST00000112736 Map3k7Q62073 579 aa13.33□□□□□ -0.28
Vps4b-202ENSMUST00000112736 Smg5Q6ZPY2 1017 aa13.33□□□□□ -0.28
Vps4b-202ENSMUST00000112736 Sh3rf3Q8C120 878 aa13.33□□□□□ -0.28
Vps4b-202ENSMUST00000112736 Ano4Q8C5H1 955 aa13.33□□□□□ -0.28
Vps4b-202ENSMUST00000112736 Afg3l1Q920A7 789 aaKnown RBP13.33□□□□□ -0.28
Vps4b-202ENSMUST00000112736 Ubxn6Q99PL6 442 aa13.33□□□□□ -0.28
Vps4b-202ENSMUST00000112736 Rab11fip1Q9D620 645 aa13.33□□□□□ -0.28
Vps4b-202ENSMUST00000112736 Tekt1Q9DAJ2 418 aa13.33□□□□□ -0.28
Vps4b-202ENSMUST00000112736 Erich2E9Q1A6 463 aa13.33□□□□□ -0.28
Vps4b-202ENSMUST00000112736 Ass1P16460 412 aa13.33□□□□□ -0.28
Vps4b-202ENSMUST00000112736 PdgfraP26618 1089 aa13.33□□□□□ -0.28
Vps4b-202ENSMUST00000112736 Elk3P41971 409 aa13.33□□□□□ -0.28
Vps4b-202ENSMUST00000112736 Q3TQQ9 903 aa13.33□□□□□ -0.28
Vps4b-202ENSMUST00000112736 Btg1-ps1Q3V0S2 161 aa13.33□□□□□ -0.28
Vps4b-202ENSMUST00000112736 Btg1-ps2Q3V0X0 161 aa13.33□□□□□ -0.28
Vps4b-202ENSMUST00000112736 RadilQ69Z89 1099 aa13.33□□□□□ -0.28
Vps4b-202ENSMUST00000112736 Mib1Q80SY4 1006 aa13.33□□□□□ -0.28
Vps4b-202ENSMUST00000112736 Castor2Q8CAB8 329 aa13.33□□□□□ -0.28
Vps4b-202ENSMUST00000112736 Trip10Q8CJ53 603 aa13.33□□□□□ -0.28
Vps4b-202ENSMUST00000112736 Cul3Q9JLV5 768 aa13.33□□□□□ -0.28
Vps4b-202ENSMUST00000112736 Glud1P26443 558 aaKnown RBP13.32□□□□□ -0.28
Vps4b-202ENSMUST00000112736 Slc38a5Q3U1J0 479 aa13.32□□□□□ -0.28
Vps4b-202ENSMUST00000112736 Dpysl3Q62188 570 aa13.32□□□□□ -0.28
Vps4b-202ENSMUST00000112736 Tgoln2Q62314 363 aa13.32□□□□□ -0.28
Vps4b-202ENSMUST00000112736 Mcoln2Q8K595 566 aa13.32□□□□□ -0.28
Vps4b-202ENSMUST00000112736 Olfr1352Q8VGX5 309 aa13.32□□□□□ -0.28
Vps4b-202ENSMUST00000112736 Foxp3Q99JB6 429 aa13.32□□□□□ -0.28
Vps4b-202ENSMUST00000112736 Mettl16Q9CQG2 553 aaKnown RBP13.32□□□□□ -0.28
Vps4b-202ENSMUST00000112736 Nde1Q9CZA6 344 aa13.32□□□□□ -0.28
Vps4b-202ENSMUST00000112736 Scgb2b12S4R2L0 112 aa13.32□□□□□ -0.28
Vps4b-202ENSMUST00000112736 Gm29554A0A087WNW4 188 aa13.32□□□□□ -0.28
Vps4b-202ENSMUST00000112736 SelenovD3YXG1 328 aa13.32□□□□□ -0.28
Vps4b-202ENSMUST00000112736 Gm8909G3UXE9 396 aa13.32□□□□□ -0.28
Vps4b-202ENSMUST00000112736 Akr1b7P21300 316 aa13.32□□□□□ -0.28
Vps4b-202ENSMUST00000112736 Abi2P62484 446 aa13.32□□□□□ -0.28
Vps4b-202ENSMUST00000112736 Ppm1jQ149T7 507 aa13.32□□□□□ -0.28
Vps4b-202ENSMUST00000112736 Trim71Q1PSW8 855 aaKnown RBP13.32□□□□□ -0.28
Vps4b-202ENSMUST00000112736 SnrpaQ62189 287 aaKnown RBP13.32□□□□□ -0.28
Vps4b-202ENSMUST00000112736 PygbQ8CI94 843 aaKnown RBP13.32□□□□□ -0.28
Vps4b-202ENSMUST00000112736 Atp6v1b1Q91YH6 513 aa13.32□□□□□ -0.28
Vps4b-202ENSMUST00000112736 Kat2bQ9JHD1 813 aa13.32□□□□□ -0.28
Vps4b-202ENSMUST00000112736 Zfp558E9Q1J0 407 aa13.32□□□□□ -0.28
Vps4b-202ENSMUST00000112736 Zfp212G3X8R7 492 aa13.32□□□□□ -0.28
Vps4b-202ENSMUST00000112736 2610008E11RikG3X964 669 aa13.32□□□□□ -0.28
Vps4b-202ENSMUST00000112736 AgxtO35423 414 aa13.32□□□□□ -0.28
Vps4b-202ENSMUST00000112736 CblP22682 913 aa13.32□□□□□ -0.28
Vps4b-202ENSMUST00000112736 Kpna2P52293 529 aaKnown RBP13.32□□□□□ -0.28
Vps4b-202ENSMUST00000112736 Pi4k2aQ2TBE6 479 aa13.32□□□□□ -0.28
Vps4b-202ENSMUST00000112736 Tespa1Q3U132 458 aa13.32□□□□□ -0.28
Vps4b-202ENSMUST00000112736 Agxt2Q3UEG6 513 aa13.32□□□□□ -0.28
Vps4b-202ENSMUST00000112736 Parp3Q3ULW8 533 aa13.32□□□□□ -0.28
Vps4b-202ENSMUST00000112736 Sema5bQ60519 1093 aa13.32□□□□□ -0.28
Vps4b-202ENSMUST00000112736 Gpd2Q64521 727 aa13.32□□□□□ -0.28
Vps4b-202ENSMUST00000112736 Ppp6r2Q8R3Q2 923 aa13.32□□□□□ -0.28
Vps4b-202ENSMUST00000112736 Cdk9Q99J95 372 aa13.32□□□□□ -0.28
Vps4b-202ENSMUST00000112736 Chst7Q9EP78 484 aa13.32□□□□□ -0.28
Vps4b-202ENSMUST00000112736 PorcnQ9JJJ7 461 aa13.32□□□□□ -0.28
Vps4b-202ENSMUST00000112736 Ptgdr2Q9Z2J6 382 aa13.32□□□□□ -0.28
Vps4b-202ENSMUST00000112736 Ppp1r36D3Z0R2 411 aa13.32□□□□□ -0.28
Vps4b-202ENSMUST00000112736 Cog7Q3UM29 770 aa13.32□□□□□ -0.28
Vps4b-202ENSMUST00000112736 Trpm3Q5F4S9 1721 aa13.32□□□□□ -0.28
Vps4b-202ENSMUST00000112736 Atg9bQ6EBV9 922 aa13.32□□□□□ -0.28
Vps4b-202ENSMUST00000112736 Akap7Q7TN79 314 aa13.32□□□□□ -0.28
Vps4b-202ENSMUST00000112736 Stk40Q7TNL3 435 aa13.32□□□□□ -0.28
Vps4b-202ENSMUST00000112736 MtbpQ8BJS8 894 aaKnown RBP13.32□□□□□ -0.28
Vps4b-202ENSMUST00000112736 PdgfcQ8CI19 345 aa13.32□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 20.6 ms