RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Olfr1467Q8VFW1 308 aa17.18■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Nedd4P46935 887 aaKnown RBP17.18■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Mettl7bQ9DD20 244 aa17.18■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Gprc5dQ9JIL6 344 aa17.18■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Olfr832Q7TRG9 312 aa17.18■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Ubxn10Q8BG34 277 aa17.18■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Kcnv1Q8BZN2 503 aa17.18■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 CenpxQ8C4X1 78 aa17.18■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Ccdc28bQ8CEG5 200 aa17.18■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Sesn3Q9CYP7 492 aa17.18■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 4930513O06RikQ9D549 161 aa17.18■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Fam71dD3YV92 440 aa17.18■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Chst15Q91XQ5 561 aa17.18■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 MbipQ99LQ1 341 aa17.18■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Gabbr1Q9WV18 960 aa17.18■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Bmp15Q9Z0L4 392 aa17.18■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Krt6bQ9Z331 562 aa17.18■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Vmn2r5K7N788 911 aa17.17■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Rbp1Q00915 135 aa17.17■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Ttc39bQ8BYY4 617 aa17.17■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Cpa5Q8R4H4 436 aa17.17■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Pcdhga4Q91XY4 930 aa17.17■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Zfp655Q9CZP3 541 aaKnown RBP17.17■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Rrm1P07742 792 aa17.17■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Ifnar1P33896 590 aa17.17■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Kcna4Q61423 654 aa17.17■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 VclQ64727 1066 aaKnown RBP17.17■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Hecw2Q6I6G8 1578 aa17.17■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 NesQ6P5H2 1864 aaKnown RBP17.17■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Pramef20B1ARV6 477 aa17.17■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Pla2g4bP0C871 782 aa17.17■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Drg1P32233 367 aaKnown RBP17.17■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Pde1aQ61481 565 aa17.17■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Atpaf2Q91YY4 289 aa17.17■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Gm5415E9PXF3 478 aa17.17■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Hnrnph2P70333 449 aaKnown RBP17.17■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 MyrfQ3UR85 1138 aa17.17■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Lsm8Q6ZWM4 96 aaKnown RBP17.17■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Rmdn2Q8BSE0 410 aa17.17■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 C8aQ8K182 587 aa17.17■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Gon4lQ9DB00 2260 aa17.17■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 AfmO89020 608 aa17.17■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Fam183bQ5NC57 135 aa17.17■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Ddx47Q9CWX9 455 aaKnown RBP17.17■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Gnat1P20612 350 aa17.17■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Carmil2Q3V3V9 1296 aa17.17■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 C1orf109Q499E6 217 aa17.17■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Trap1Q9CQN1 706 aaKnown RBP17.17■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Fxr2Q9WVR4 673 aaKnown RBP17.17■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Zfp804bA0A0G2JGH6 1343 aa17.17■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 A0A1Y7VIU7 259 aa17.17■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 MkksQ9JI70 570 aa17.17■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Sema4dO09126 861 aa17.16■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 WapP01173 134 aa17.16■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Capn11Q6J756 714 aa17.16■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 SvoplQ6PDF3 494 aa17.16■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Osbpl7A2A716 963 aa17.16■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Abhd12bG3UZN6 359 aa17.16■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Pex5O09012 639 aa17.16■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Sult1e1P49891 295 aa17.16■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Slc24a2Q14BI1 711 aa17.16■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 2900092C05RikQ5I0V9 184 aa17.16■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Tagln3Q9R1Q8 199 aa17.16■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Oog1E9Q5G7 496 aa17.16■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 CnpP16330 420 aa17.16■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Psmd7P26516 321 aa17.16■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Ppp2r1bQ7TNP2 601 aaKnown RBP17.16■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Usp1Q8BJQ2 784 aa17.16■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Pcdha10Q91Y20 946 aa17.16■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Zmynd10Q99ML0 440 aa17.16■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Rrn3B2RS91 656 aa17.16■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Ece2Q80Z60 881 aa17.16■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Trim14Q8BVW3 440 aa17.16■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Pkn2Q8BWW9 983 aa17.16■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Tspan14Q8QZY6 270 aa17.16■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 TbccQ8VCN9 341 aa17.16■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 MrrfQ9D6S7 262 aaKnown RBP17.16■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Slfn3A0A1L1STQ7 640 aa17.16■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Gm8237E9Q257 205 aa17.16■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Gm10436L7N1Y3 520 aa17.16■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Cyp2j11Q3UNV2 504 aa17.16■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 9930111J21Rik1Q5SVP0 844 aa17.16■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Ssxb5Q6XAS2 159 aa17.16■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Fam102bQ8BQS4 339 aa17.16■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Snx9Q91VH2 595 aa17.16■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Q9D1F3 157 aa17.16■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Spata31E9QAF0 1014 aa17.16■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Tnfaip8Q921Z5 198 aa17.16■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Vmn2r23E9PXI5 849 aa17.16■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Prox1P48437 737 aa17.16■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Btnl1Q7TST0 509 aa17.16■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Bsdc1Q80Y55 427 aa17.16■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Nsl1Q8K305 281 aa17.16■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 4933425L06RikQ9D3Z8 585 aa17.16■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Gm8113E0CXS8 587 aa17.16■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Gm5689F6Y2A6 97 aa17.16■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Hnrnph1O35737 449 aaKnown RBP17.16■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Lrrc4bP0C192 709 aa17.16■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Kcnf1Q7TSH7 493 aa17.16■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 SnphQ80U23 495 aa17.16■□□□□ 0.34
Retrieved 100 of 22,080 RNA–protein pairs in 27.9 ms