RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Trim12aQ99PQ1 284 aa10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Asb11Q9CQ31 323 aa10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Scyl3Q9DBQ7 735 aa10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Drg2Q9QXB9 364 aaKnown RBP10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Cntnap5cQ0V8T7 1305 aa10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 AspgA0JNU3 564 aa10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Gm5483B2RV77 97 aa10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Spin2fJ3QPU0 254 aa10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Tnfrsf11bO08712 401 aa10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Atoh1P48985 351 aa10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Ankmy2Q3TPE9 440 aa10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Ttc9Q3V038 219 aa10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Dph1Q5NCQ5 438 aa10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Sarm1Q6PDS3 724 aa10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Ccdc40Q8BI79 1192 aa10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Clec4gQ8BNX1 294 aa10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Aldh5a1Q8BWF0 523 aa10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Lamtor4Q8CF66 99 aa10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Taco1Q8K0Z7 294 aaKnown RBP10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Dedd2Q8QZV0 330 aa10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Syf2Q9D198 242 aaKnown RBP10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Chit1Q9D7Q1 464 aa10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Rab27aQ9ERI2 221 aa10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Prl2c5Q9JLV9 222 aa10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Orc1Q9Z1N2 840 aaKnown RBP10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Map2P20357 1828 aa10.71□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Cdh18E9Q9Q6 790 aa10.71□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Odc1P00860 461 aa10.71□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Oog3Q3UWY1 500 aa10.71□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Zfp90Q61967 636 aa10.71□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 ArhgdiaQ99PT1 204 aaKnown RBP10.71□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Mrpl40Q9Z2Q5 206 aa10.71□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 ZfaP23607 742 aa10.71□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 RelaQ04207 549 aa10.71□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Apol7eQ3UZ24 369 aa10.71□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Nr2c1Q505F1 590 aa10.71□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Chi3l1Q61362 389 aa10.71□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Dpysl3Q62188 570 aa10.71□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Washc1Q8VDD8 475 aa10.71□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Agap3Q8VHH5 910 aa10.71□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Rps6kb2Q9Z1M4 485 aa10.71□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Pds5aQ6A026 1332 aa10.71□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Unc13bQ9Z1N9 1602 aa10.71□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Tmc8Q7TN58 722 aa10.71□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Spata20Q80YT5 790 aa10.71□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Q8BGC1 442 aa10.71□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Tmem260Q8BMD6 703 aa10.71□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Armc6Q8BNU0 468 aa10.71□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Tlk1Q8C0V0 766 aa10.71□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Rftn2Q8CHX7 500 aa10.71□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 CopaQ8CIE6 1224 aaKnown RBP10.71□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Wdr98Q8VC42 657 aa10.71□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Ilf2Q9CXY6 390 aaKnown RBP10.71□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 BlvraQ9CY64 295 aa10.71□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 PnkpQ9JLV6 522 aaKnown RBP10.71□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 CdylQ9WTK2 593 aa10.71□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Apoa4P06728 395 aa10.7□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 FechP22315 420 aaKnown RBP10.7□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Wnt10bP48614 389 aa10.7□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 P2rx5Q3UYI1 455 aa10.7□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Mxd4Q60948 209 aa10.7□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Gm7247Q6UY52 187 aa10.7□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Ccdc151Q8BSN3 593 aa10.7□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Ccdc90bQ8C3X2 256 aa10.7□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Vmn1r213Q8R278 384 aa10.7□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Stk33Q924X7 491 aa10.7□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Ttc30a1Q99J38 664 aa10.7□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Ppp1r3aQ99MR9 1089 aa10.7□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Atp8b5A3FIN4 1183 aa10.7□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 C2cd2E9Q3C1 696 aa10.7□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Aknad1E9Q8N6 675 aa10.7□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 GemP55041 295 aa10.7□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Plk1Q07832 603 aa10.7□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Olfr212Q7TS33 327 aa10.7□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Trip10Q8CJ53 603 aa10.7□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Fgd4Q91ZT5 766 aa10.7□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Ergic2Q9CR89 377 aa10.7□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Psmd12Q9D8W5 456 aa10.7□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Nudt5Q9JKX6 218 aa10.7□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 PolkQ9QUG2 852 aa10.7□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Ap4b1Q9WV76 738 aa10.7□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 L3mbtl1A2A5N8 826 aa10.7□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Lcn6A2AJB9 181 aa10.7□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Hmgxb3G3X9M3 1254 aa10.7□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Gm8298J3QPI0 401 aa10.7□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 JchainP01592 159 aa10.7□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Pdha1P35486 390 aaKnown RBP10.7□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Fam172aQ3TNH5 417 aa10.7□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Znf280dQ68FE8 974 aa10.7□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Elmo2Q8BHL5 732 aa10.7□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Slc9a9Q8BZ00 644 aa10.7□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Pcdhb11Q91UZ8 797 aa10.7□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Tnip2Q99JG7 430 aa10.7□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Psmd9Q9CR00 222 aa10.7□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Tmem86aQ9D8N3 241 aa10.7□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Zscan12Q9Z1D7 501 aa10.7□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Chd2E9PZM4 1827 aaKnown RBP10.7□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Ttc30a2A2AKQ8 664 aa10.7□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Vwa5b1A9Z1V5 1215 aa10.7□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Slc16a6B1AT66 607 aa10.7□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 26.8 ms