RNA–Protein interactions for RNA: ENSMUST00000033378.12

Ebf3-201, Transcript of Transcription factor COE3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ebf3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-201ENSMUST00000033378 Senp7Q8BUH8 1037 aa19.19■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Dnajc9Q91WN1 259 aaKnown RBP19.19■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Arih1Q9Z1K5 555 aa19.19■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Gm5114W4VSN8 858 aa19.19■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Kidins220E9Q9B7 1793 aa19.19■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Plekhg4A0A1L1SU27 1217 aa19.19■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Mup10A2BIN1 180 aa19.19■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Mup14A2CEK7 180 aa19.19■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Mup19A9C497 187 aa19.19■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Mup15A9R9W0 180 aa19.19■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Mup17B5X0G2 180 aa19.19■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Mup8E9PVW0 235 aa19.19■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Mup7E9QA79 235 aa19.19■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Ppargc1aO70343 797 aa19.19■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Mup6P02762 180 aa19.19■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Mup1P11588 180 aa19.19■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Mup2P11589 180 aa19.19■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Erbb2P70424 1256 aa19.19■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Trpc1Q61056 793 aa19.19■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Cwf19l2Q8BG79 887 aaKnown RBP19.19■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Pi4kbQ8BKC8 816 aa19.19■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Cog3Q8CI04 820 aa19.19■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Dcaf8Q8N7N5 591 aa19.19■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Cyp2c50Q91X77 490 aa19.19■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Tmed10Q9D1D4 219 aaKnown RBP19.19■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Dcaf6Q9DC22 876 aa19.19■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Slc5a4aQ9ET37 656 aa19.19■□□□□ 0.66
Ebf3-201ENSMUST00000033378 TprnA2AI08 749 aaKnown RBP19.18■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Elk3P41971 409 aa19.18■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Gspt2Q149F3 632 aa19.18■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Ccdc185Q3V118 621 aa19.18■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Xpo1Q6P5F9 1071 aaKnown RBP19.18■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Gpatch2lQ6PE65 482 aa19.18■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Gucy2gQ6TL19 1100 aa19.18■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Q8BP99 230 aa19.18■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Ildr1Q8CBR1 537 aa19.18■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Vwa5aQ99KC8 793 aaKnown RBP19.18■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Mapk13Q9Z1B7 366 aa19.18■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Mindy4b-psA0A1W2P7H6 457 aa19.18■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Gm16430A6X8J1 155 aa19.18■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Ace3D0G895 737 aa19.18■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Q3UJP5 209 aa19.18■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Axdnd1Q3UZ57 424 aa19.18■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Atp13a3Q5XF89 1219 aa19.18■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Rbbp7Q60973 425 aaKnown RBP19.18■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Klra3Q64329 266 aa19.18■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Afap1l1Q8BZI0 768 aa19.18■□□□□ 0.66
Ebf3-201ENSMUST00000033378 ItchQ8C863 864 aa19.18■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Zfp446Q8C9M8 523 aa19.18■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Colgalt1Q8K297 617 aa19.18■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Dedd2Q8QZV0 330 aa19.18■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Tbrg4Q91YM4 630 aaKnown RBP19.18■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Slxl1Q9D515 155 aa19.18■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Pou4f1P17208 421 aa19.18■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Tbc1d12Q6A039 696 aa19.18■□□□□ 0.66
Ebf3-201ENSMUST00000033378 CapslQ6P8Y1 208 aa19.18■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Atxn2lQ7TQH0 1049 aaKnown RBP19.18■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Pdzph1Q8BGR1 1238 aa19.18■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Tubgcp5Q8BKN5 1024 aa19.18■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Stx5Q8K1E0 355 aa19.18■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Hacd3Q8K2C9 362 aa19.18■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Vmn1r191Q8K4D0 298 aa19.18■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Mrpl57Q9CQF8 102 aaKnown RBP19.18■□□□□ 0.66
Ebf3-201ENSMUST00000033378 PalmdQ9JHU2 551 aa19.18■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Mettl1Q9Z120 268 aa19.18■□□□□ 0.66
Ebf3-201ENSMUST00000033378 A530032D15RikE9Q422 215 aa19.18■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Rrm1P07742 792 aa19.18■□□□□ 0.66
Ebf3-201ENSMUST00000033378 PtpreP49446 699 aa19.18■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Oas1fQ14AZ4 364 aa19.18■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Rmdn3Q3UJU9 470 aa19.18■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Rd3Q8BRE0 195 aa19.18■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Fam187aQ9D3R5 417 aa19.18■□□□□ 0.66
Ebf3-201ENSMUST00000033378 RalbQ9JIW9 206 aa19.18■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Tmem59Q9QY73 323 aa19.18■□□□□ 0.66
Ebf3-201ENSMUST00000033378 R3hdm1E9Q9Q2 1135 aaKnown RBP19.17■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Unc5cO08747 931 aa19.17■□□□□ 0.66
Ebf3-201ENSMUST00000033378 CidebO70303 219 aa19.17■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Psmc3O88685 442 aa19.17■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Mboat4P0C7A3 435 aa19.17■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Sh3gl2Q62420 352 aa19.17■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Mical2Q8BML1 960 aa19.17■□□□□ 0.66
Ebf3-201ENSMUST00000033378 BfarQ8R079 450 aa19.17■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Pcdhb1Q91Y08 818 aa19.17■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Gm5737A0A140LI11 423 aa19.17■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Cd44P15379 778 aa19.17■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Dpysl3Q62188 570 aa19.17■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Ndufa10Q99LC3 355 aaKnown RBP19.17■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Rab11fip1Q9D620 645 aa19.17■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Znf711A2ANX9 761 aa19.17■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Lilra5D3Z7A9 295 aa19.17■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Apba3O88888 571 aa19.17■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Mmp13P33435 472 aa19.17■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Gm136Q3V037 328 aa19.17■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Q80WR5 230 aa19.17■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Katnal2Q9D3R6 539 aa19.17■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Pdpk1Q9Z2A0 559 aa19.17■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Vmn2r104E9Q2J5 860 aa19.17■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Gm5814J3QP80 125 aa19.17■□□□□ 0.66
Ebf3-201ENSMUST00000033378 MyrfQ3UR85 1138 aa19.17■□□□□ 0.66
Ebf3-201ENSMUST00000033378 Gstt2Q61133 244 aa19.17■□□□□ 0.66
Retrieved 100 of 22,080 RNA–protein pairs in 25.4 ms