RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Suz12Q80U70 741 aaKnown RBP13.32□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Cpsf7Q8BTV2 471 aaKnown RBP13.32□□□□□ -0.28
Rnf4-201ENSMUST00000030992 GlmnQ8BZM1 596 aa13.32□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Zcchc18Q8VD24 393 aa13.32□□□□□ -0.28
Rnf4-201ENSMUST00000030992 CarfQ8VHI4 689 aa13.32□□□□□ -0.28
Rnf4-201ENSMUST00000030992 MutyhQ99P21 515 aa13.32□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Fgfr1op2Q9CRA9 253 aa13.32□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Slc5a4aQ9ET37 656 aa13.32□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Scgb2b21A0A087WQA9 112 aa13.31□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Zfp839E9PUU5 921 aa13.31□□□□□ -0.28
Rnf4-201ENSMUST00000030992 March10E9PX79 788 aa13.31□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Mtco1P00397 514 aa13.31□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Hoxb8P09632 243 aa13.31□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Ephb2P54763 986 aa13.31□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Vgll3P85442 326 aa13.31□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Slc10a4Q3UEZ8 437 aa13.31□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Shroom1Q5SX79 823 aa13.31□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Crybg3Q80W49 1005 aa13.31□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Cabs1Q8C633 391 aa13.31□□□□□ -0.28
Rnf4-201ENSMUST00000030992 PdgfcQ8CI19 345 aa13.31□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Cplx3Q8R1B5 158 aa13.31□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Mrps5Q99N87 432 aaKnown RBP13.31□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Tbc1d15Q9CXF4 671 aa13.31□□□□□ -0.28
Rnf4-201ENSMUST00000030992 MtrexQ9CZU3 1040 aaKnown RBP13.31□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Ttc33Q9D6K7 262 aa13.31□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Zfyve19Q9DAZ9 389 aa13.31□□□□□ -0.28
Rnf4-201ENSMUST00000030992 XkQ9QXY7 446 aa13.31□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Lonrf2B2RT44 518 aa13.31□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Cyp4f40G3UW81 524 aa13.31□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Rpl21O09167 160 aaKnown RBP13.31□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Mphosph8Q3TYA6 858 aaKnown RBP13.31□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Cln3Q61124 438 aa13.31□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Tmem130Q6NXM3 419 aa13.31□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Gpatch2lQ6PE65 482 aa13.31□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Hdhd5Q91WM2 419 aa13.31□□□□□ -0.28
Rnf4-201ENSMUST00000030992 NcaldQ91X97 193 aa13.31□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Bbs5Q9CZQ9 341 aa13.31□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Slc25a19Q9DAM5 318 aa13.31□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Piwil1Q9JMB7 862 aa13.31□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Twf2Q9Z0P5 349 aaKnown RBP13.31□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Ank3G5E8K5 1961 aa13.31□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Edil3O35474 480 aa13.3□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Anxa8O35640 327 aa13.3□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Tspyl1O88852 379 aa13.3□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Ect2Q07139 913 aa13.3□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Phactr4Q501J7 694 aa13.3□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Samhd1Q60710 627 aa13.3□□□□□ -0.28
Rnf4-201ENSMUST00000030992 WtipQ7TQJ8 398 aa13.3□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Sh3tc2Q80VA5 1289 aa13.3□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Ubap1Q8BH48 502 aa13.3□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Lrrc24Q8BHA1 521 aa13.3□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Trub1Q8C0D0 338 aaKnown RBP13.3□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Uba3Q8C878 462 aa13.3□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Olfr397Q8VEZ6 315 aa13.3□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Slc39a3Q99K24 317 aa13.3□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Igf2bp3Q9CPN8 579 aaKnown RBP13.3□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Ssu72Q9CY97 194 aaKnown RBP13.3□□□□□ -0.28
Rnf4-201ENSMUST00000030992 MycbpQ9EQS3 103 aa13.3□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Scn1aA2APX8 2009 aa13.3□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Ccdc170D3YXL0 722 aa13.3□□□□□ -0.28
Rnf4-201ENSMUST00000030992 D3Z070 196 aa13.3□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Cyp2c68K7N6C2 491 aa13.3□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Vav1P27870 845 aa13.3□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Sstr1P30873 391 aa13.3□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Arl4cP61208 192 aa13.3□□□□□ -0.28
Rnf4-201ENSMUST00000030992 9130409I23RikQ3TS87 320 aa13.3□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Mrgprb1Q3UG61 350 aa13.3□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Pik3r5Q5SW28 871 aa13.3□□□□□ -0.28
Rnf4-201ENSMUST00000030992 SkiQ60698 725 aa13.3□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Gemin4Q6P6L6 1058 aaKnown RBP13.3□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Fam102aQ78T81 392 aa13.3□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Spata20Q80YT5 790 aa13.3□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Enpp4Q8BTJ4 456 aa13.3□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Sh3rf3Q8C120 878 aa13.3□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Fbxl13Q8CDU4 790 aa13.3□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Ppp1r16bQ8VHQ3 568 aa13.3□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Ugp2Q91ZJ5 508 aa13.3□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Bcs1lQ9CZP5 418 aa13.3□□□□□ -0.28
Rnf4-201ENSMUST00000030992 E2f6O54917 272 aa13.3□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Nos2P29477 1144 aa13.3□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Gnl1P36916 607 aa13.3□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Eif3eP60229 445 aaKnown RBP13.3□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Casp4P70343 373 aa13.3□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Ugt1a2P70691 533 aa13.3□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Mark2Q05512 776 aa13.3□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Trim24Q64127 1051 aaKnown RBP13.3□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Tfdp2Q64163 446 aa13.3□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Map1sQ8C052 973 aa13.3□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Tmx4Q8C0L0 335 aa13.3□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Snrnp25Q8VIK1 123 aa13.3□□□□□ -0.28
Rnf4-201ENSMUST00000030992 PollQ9QXE2 573 aaKnown RBP13.3□□□□□ -0.28
Rnf4-201ENSMUST00000030992 PygmQ9WUB3 842 aaKnown RBP13.3□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Cntnap5aQ0V8T9 1304 aa13.29□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Glb1P23780 647 aa13.29□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Mmp13P33435 472 aa13.29□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Oaz1P54369 227 aa13.29□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Sash1P59808 1230 aa13.29□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Il6stQ00560 917 aa13.29□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Zbtb14Q08376 449 aa13.29□□□□□ -0.28
Rnf4-201ENSMUST00000030992 Oas1fQ14AZ4 364 aa13.29□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 49.3 ms