RNA–Protein interactions for RNA: ENSMUST00000014065.15

Clip3-201, Transcript of CAP-Gly domain-containing linker protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clip3, Length 3,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3-201ENSMUST00000014065 Prmt9Q3U3W5 846 aa10.78□□□□□ -0.68
Clip3-201ENSMUST00000014065 Spag6Q3V0U9 509 aa10.78□□□□□ -0.68
Clip3-201ENSMUST00000014065 Vgll2Q8BGW8 322 aa10.78□□□□□ -0.68
Clip3-201ENSMUST00000014065 Wdr35Q8BND3 1181 aa10.78□□□□□ -0.68
Clip3-201ENSMUST00000014065 Q8CIL4 281 aa10.78□□□□□ -0.68
Clip3-201ENSMUST00000014065 Sh2d5Q8JZW5 429 aa10.78□□□□□ -0.68
Clip3-201ENSMUST00000014065 Haus3Q8QZX2 570 aa10.78□□□□□ -0.68
Clip3-201ENSMUST00000014065 Pglyrp2Q8VCS0 530 aa10.78□□□□□ -0.68
Clip3-201ENSMUST00000014065 Pdk3Q922H2 415 aaKnown RBP10.78□□□□□ -0.68
Clip3-201ENSMUST00000014065 Psmd9Q9CR00 222 aa10.78□□□□□ -0.68
Clip3-201ENSMUST00000014065 Nudt8Q9CR24 210 aa10.78□□□□□ -0.68
Clip3-201ENSMUST00000014065 Mageb3Q9D2H4 330 aa10.78□□□□□ -0.68
Clip3-201ENSMUST00000014065 Hs6st3Q9QYK4 470 aa10.78□□□□□ -0.68
Clip3-201ENSMUST00000014065 4930523C07RikE9Q2T4 99 aa10.77□□□□□ -0.69
Clip3-201ENSMUST00000014065 Il3P01586 166 aa10.77□□□□□ -0.69
Clip3-201ENSMUST00000014065 HdcP23738 662 aa10.77□□□□□ -0.69
Clip3-201ENSMUST00000014065 Actr2P61161 394 aa10.77□□□□□ -0.69
Clip3-201ENSMUST00000014065 SnrpfP62307 86 aaKnown RBP10.77□□□□□ -0.69
Clip3-201ENSMUST00000014065 Capn11Q6J756 714 aa10.77□□□□□ -0.69
Clip3-201ENSMUST00000014065 Ckap2lQ7TS74 745 aa10.77□□□□□ -0.69
Clip3-201ENSMUST00000014065 NfascQ810U3 1240 aa10.77□□□□□ -0.69
Clip3-201ENSMUST00000014065 Pacsin3Q99JB8 424 aa10.77□□□□□ -0.69
Clip3-201ENSMUST00000014065 Taf11Q99JX1 211 aa10.77□□□□□ -0.69
Clip3-201ENSMUST00000014065 SncaipQ99ME3 962 aa10.77□□□□□ -0.69
Clip3-201ENSMUST00000014065 Bbs5Q9CZQ9 341 aa10.77□□□□□ -0.69
Clip3-201ENSMUST00000014065 Abcg8Q9DBM0 673 aa10.77□□□□□ -0.69
Clip3-201ENSMUST00000014065 Zfp831A2ADM8 1628 aa10.77□□□□□ -0.69
Clip3-201ENSMUST00000014065 Gcnt4E9Q649 455 aa10.77□□□□□ -0.69
Clip3-201ENSMUST00000014065 Gm3371F7CQW8 167 aa10.77□□□□□ -0.69
Clip3-201ENSMUST00000014065 Serpinh1P19324 417 aaKnown RBP10.77□□□□□ -0.69
Clip3-201ENSMUST00000014065 Bcat1P24288 386 aa10.77□□□□□ -0.69
Clip3-201ENSMUST00000014065 Alox15P39654 663 aa10.77□□□□□ -0.69
Clip3-201ENSMUST00000014065 Sparcl1P70663 650 aa10.77□□□□□ -0.69
Clip3-201ENSMUST00000014065 Gata5P97489 404 aa10.77□□□□□ -0.69
Clip3-201ENSMUST00000014065 Arhgap45Q3TBD2 1116 aa10.77□□□□□ -0.69
Clip3-201ENSMUST00000014065 Atxn7l3bQ3UD01 97 aa10.77□□□□□ -0.69
Clip3-201ENSMUST00000014065 Spdye4aQ5IBH6 268 aa10.77□□□□□ -0.69
Clip3-201ENSMUST00000014065 Tmcc1Q69ZZ6 649 aa10.77□□□□□ -0.69
Clip3-201ENSMUST00000014065 Frmd5Q6P5H6 517 aa10.77□□□□□ -0.69
Clip3-201ENSMUST00000014065 Fam102aQ78T81 392 aa10.77□□□□□ -0.69
Clip3-201ENSMUST00000014065 FsbpQ8BKE5 299 aa10.77□□□□□ -0.69
Clip3-201ENSMUST00000014065 Mical2Q8BML1 960 aa10.77□□□□□ -0.69
Clip3-201ENSMUST00000014065 Phactr3Q8BYK5 558 aa10.77□□□□□ -0.69
Clip3-201ENSMUST00000014065 Uba3Q8C878 462 aa10.77□□□□□ -0.69
Clip3-201ENSMUST00000014065 Stau2Q8CJ67 570 aaKnown RBP10.77□□□□□ -0.69
Clip3-201ENSMUST00000014065 Caap1Q8VDY9 356 aa10.77□□□□□ -0.69
Clip3-201ENSMUST00000014065 Olfr449Q8VGW8 311 aa10.77□□□□□ -0.69
Clip3-201ENSMUST00000014065 Cd248Q91V98 765 aa10.77□□□□□ -0.69
Clip3-201ENSMUST00000014065 HlcsQ920N2 722 aa10.77□□□□□ -0.69
Clip3-201ENSMUST00000014065 Psmd6Q99JI4 389 aa10.77□□□□□ -0.69
Clip3-201ENSMUST00000014065 Sun1Q9D666 913 aaKnown RBP10.77□□□□□ -0.69
Clip3-201ENSMUST00000014065 Rbp7Q9EPC5 134 aa10.77□□□□□ -0.69
Clip3-201ENSMUST00000014065 Cyp39a1Q9JKJ9 470 aa10.77□□□□□ -0.69
Clip3-201ENSMUST00000014065 Ptpn4Q9WU22 926 aa10.77□□□□□ -0.69
Clip3-201ENSMUST00000014065 Klf6O08584 283 aa10.76□□□□□ -0.69
Clip3-201ENSMUST00000014065 Nos2P29477 1144 aa10.76□□□□□ -0.69
Clip3-201ENSMUST00000014065 Slc1a2P43006 572 aa10.76□□□□□ -0.69
Clip3-201ENSMUST00000014065 Lgr6Q3UVD5 967 aa10.76□□□□□ -0.69
Clip3-201ENSMUST00000014065 PterQ60866 349 aa10.76□□□□□ -0.69
Clip3-201ENSMUST00000014065 Soat1Q61263 540 aa10.76□□□□□ -0.69
Clip3-201ENSMUST00000014065 MregQ6NVG5 214 aa10.76□□□□□ -0.69
Clip3-201ENSMUST00000014065 Znf579Q80VM4 562 aa10.76□□□□□ -0.69
Clip3-201ENSMUST00000014065 B3glctQ8BHT6 489 aa10.76□□□□□ -0.69
Clip3-201ENSMUST00000014065 Arhgap29Q8CGF1 1266 aa10.76□□□□□ -0.69
Clip3-201ENSMUST00000014065 Stx18Q8VDS8 334 aa10.76□□□□□ -0.69
Clip3-201ENSMUST00000014065 Trpv6Q91WD2 767 aa10.76□□□□□ -0.69
Clip3-201ENSMUST00000014065 YarsQ91WQ3 528 aaKnown RBP10.76□□□□□ -0.69
Clip3-201ENSMUST00000014065 Rin1Q921Q7 763 aa10.76□□□□□ -0.69
Clip3-201ENSMUST00000014065 Lrp8Q924X6 996 aa10.76□□□□□ -0.69
Clip3-201ENSMUST00000014065 StambpQ9CQ26 424 aa10.76□□□□□ -0.69
Clip3-201ENSMUST00000014065 MceeQ9D1I5 178 aa10.76□□□□□ -0.69
Clip3-201ENSMUST00000014065 Abcb5B5X0E4 1255 aa10.76□□□□□ -0.69
Clip3-201ENSMUST00000014065 Rb1P13405 921 aa10.76□□□□□ -0.69
Clip3-201ENSMUST00000014065 Alkbh5Q3TSG4 395 aaKnown RBP10.76□□□□□ -0.69
Clip3-201ENSMUST00000014065 Prkaa1Q5EG47 559 aa10.76□□□□□ -0.69
Clip3-201ENSMUST00000014065 Tgoln2Q62314 363 aa10.76□□□□□ -0.69
Clip3-201ENSMUST00000014065 Zfyve28Q6ZPK7 905 aa10.76□□□□□ -0.69
Clip3-201ENSMUST00000014065 Olfr670Q7TRP3 312 aa10.76□□□□□ -0.69
Clip3-201ENSMUST00000014065 Siglec10Q80ZE3 688 aa10.76□□□□□ -0.69
Clip3-201ENSMUST00000014065 Cpsf7Q8BTV2 471 aaKnown RBP10.76□□□□□ -0.69
Clip3-201ENSMUST00000014065 Senp7Q8BUH8 1037 aa10.76□□□□□ -0.69
Clip3-201ENSMUST00000014065 Osbpl2Q8BX94 484 aa10.76□□□□□ -0.69
Clip3-201ENSMUST00000014065 Zfp263Q8CF60 680 aa10.76□□□□□ -0.69
Clip3-201ENSMUST00000014065 Polr2bQ8CFI7 1174 aaKnown RBP10.76□□□□□ -0.69
Clip3-201ENSMUST00000014065 Dhx36Q8VHK9 1001 aaKnown RBP10.76□□□□□ -0.69
Clip3-201ENSMUST00000014065 Epn3Q91W69 636 aa10.76□□□□□ -0.69
Clip3-201ENSMUST00000014065 Tekt1Q9DAJ2 418 aa10.76□□□□□ -0.69
Clip3-201ENSMUST00000014065 Tm9sf1Q9DBU0 606 aa10.76□□□□□ -0.69
Clip3-201ENSMUST00000014065 Dlc1Q9R0Z9 1092 aa10.76□□□□□ -0.69
Clip3-201ENSMUST00000014065 Lilra5D3Z7A9 295 aa10.76□□□□□ -0.69
Clip3-201ENSMUST00000014065 Xbp1O35426 267 aa10.76□□□□□ -0.69
Clip3-201ENSMUST00000014065 Wdr18Q4VBE8 431 aa10.76□□□□□ -0.69
Clip3-201ENSMUST00000014065 Sema5bQ60519 1093 aa10.76□□□□□ -0.69
Clip3-201ENSMUST00000014065 Eif2dQ61211 570 aaKnown RBP10.76□□□□□ -0.69
Clip3-201ENSMUST00000014065 Nipal4Q8BZF2 406 aa10.76□□□□□ -0.69
Clip3-201ENSMUST00000014065 Cox16Q9CR63 106 aa10.76□□□□□ -0.69
Clip3-201ENSMUST00000014065 Castor1Q9CWQ8 331 aa10.76□□□□□ -0.69
Clip3-201ENSMUST00000014065 Smyd3Q9CWR2 428 aa10.76□□□□□ -0.69
Clip3-201ENSMUST00000014065 Krt7Q9DCV7 457 aa10.76□□□□□ -0.69
Clip3-201ENSMUST00000014065 Rdh14Q9ERI6 334 aa10.76□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 16.5 ms