RNA–Protein interactions for RNA: YJL029C

VPS53, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS53, Length 2,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS53YJL029C RPL12AP0CX53 165 aaKnown RBP2.61□□□□□ -1.99
VPS53YJL029C RPL12BP0CX54 165 aa2.61□□□□□ -1.99
VPS53YJL029C VHS2P40463 436 aa2.61□□□□□ -1.99
VPS53YJL029C LOC1P43586 204 aaPredicted RBP2.61□□□□□ -1.99
VPS53YJL029C DSK2P48510 373 aa2.61□□□□□ -1.99
VPS53YJL029C YDR366CP87287 132 aa2.61□□□□□ -1.99
VPS53YJL029C HAL1Q01766 294 aa2.61□□□□□ -1.99
VPS53YJL029C UPS3Q04006 179 aa2.61□□□□□ -1.99
VPS53YJL029C RPS2P25443 254 aaKnown RBP2.61□□□□□ -1.99
VPS53YJL029C HMX1P32339 317 aa2.61□□□□□ -1.99
VPS53YJL029C UIP3P39547 235 aa2.61□□□□□ -1.99
VPS53YJL029C ATP19P81451 68 aa2.61□□□□□ -1.99
VPS53YJL029C PAU1P0CE88 120 aa2.6□□□□□ -1.99
VPS53YJL029C PAU14P0CE89 120 aa2.6□□□□□ -1.99
VPS53YJL029C PAU6P0CE90 120 aa2.6□□□□□ -1.99
VPS53YJL029C PAU18P0CE91 120 aa2.6□□□□□ -1.99
VPS53YJL029C PAU8P0CE92 120 aa2.6□□□□□ -1.99
VPS53YJL029C PAU11P0CE93 120 aa2.6□□□□□ -1.99
VPS53YJL029C TIR1P10863 254 aa2.6□□□□□ -1.99
VPS53YJL029C PAU13P38725 120 aa2.6□□□□□ -1.99
VPS53YJL029C MOG1P47123 218 aa2.6□□□□□ -1.99
VPS53YJL029C JAC1P53193 184 aa2.6□□□□□ -1.99
VPS53YJL029C BRP1P53194 125 aa2.6□□□□□ -1.99
VPS53YJL029C PAU10Q03050 120 aa2.6□□□□□ -1.99
VPS53YJL029C YMR253CQ04835 414 aa2.6□□□□□ -1.99
VPS53YJL029C PAU20Q08322 120 aa2.6□□□□□ -1.99
VPS53YJL029C YGL194C-AQ2V2P6 80 aa2.6□□□□□ -1.99
VPS53YJL029C PAU9Q3E770 120 aa2.6□□□□□ -1.99
VPS53YJL029C RPL31BP0C2H9 113 aaKnown RBP2.6□□□□□ -1.99
VPS53YJL029C MRPL4P36517 319 aa2.6□□□□□ -1.99
VPS53YJL029C TRS20P38334 175 aa2.6□□□□□ -1.99
VPS53YJL029C UBC12P52491 188 aa2.6□□□□□ -1.99
VPS53YJL029C ADD37Q03233 198 aa2.6□□□□□ -1.99
VPS53YJL029C YOR015WQ12169 119 aa2.6□□□□□ -1.99
VPS53YJL029C SEC59P20048 519 aa2.59□□□□□ -1.99
VPS53YJL029C KEG1P43614 200 aa2.59□□□□□ -1.99
VPS53YJL029C SPC1P46965 94 aa2.59□□□□□ -1.99
VPS53YJL029C SME1Q12330 94 aaPredicted RBP2.59□□□□□ -1.99
VPS53YJL029C POF1P25576 258 aa2.59□□□□□ -2
VPS53YJL029C MSK1P32048 576 aa2.59□□□□□ -2
VPS53YJL029C SRP21P32342 167 aa2.59□□□□□ -2
VPS53YJL029C YGR025WP53216 100 aa2.59□□□□□ -2
VPS53YJL029C YPS5P53057 165 aa2.58□□□□□ -2
VPS53YJL029C YLR042CQ07990 161 aa2.58□□□□□ -2
VPS53YJL029C DAD1Q12248 94 aa2.58□□□□□ -2
VPS53YJL029C LDS1P31379 325 aa2.58□□□□□ -2
VPS53YJL029C RAV2Q03956 351 aa2.58□□□□□ -2
VPS53YJL029C YOR105WQ08504 108 aa2.58□□□□□ -2
VPS53YJL029C PCC1Q3E833 88 aa2.58□□□□□ -2
VPS53YJL029C RPR2P40571 144 aa2.57□□□□□ -2
VPS53YJL029C PHS1P40857 217 aa2.57□□□□□ -2
VPS53YJL029C TOM7P53507 60 aa2.57□□□□□ -2
VPS53YJL029C DAD4P69851 72 aa2.57□□□□□ -2
VPS53YJL029C COA4Q05809 96 aa2.57□□□□□ -2
VPS53YJL029C MRP2P10663 115 aaPredicted RBP2.57□□□□□ -2
VPS53YJL029C YCR001WP25347 104 aa2.57□□□□□ -2
VPS53YJL029C ERI1P62651 68 aaKnown RBP2.57□□□□□ -2
VPS53YJL029C AIM34Q03673 198 aa2.57□□□□□ -2
VPS53YJL029C YML108WQ03759 105 aa2.57□□□□□ -2
VPS53YJL029C TIM22Q12328 207 aa2.57□□□□□ -2
VPS53YJL029C Q0255P03881 472 aa2.56□□□□□ -2
VPS53YJL029C RPL14AP36105 138 aaKnown RBP2.56□□□□□ -2
VPS53YJL029C RIB5P38145 238 aa2.56□□□□□ -2
VPS53YJL029C RPL14BP38754 138 aaKnown RBP2.56□□□□□ -2
VPS53YJL029C IRC22P40006 225 aa2.56□□□□□ -2
VPS53YJL029C YGR026WP53217 278 aa2.56□□□□□ -2
VPS53YJL029C YBR200W-AQ3E755 54 aa2.56□□□□□ -2
VPS53YJL029C YPR010C-AA5Z2X5 72 aa2.56□□□□□ -2
VPS53YJL029C COQ3P27680 312 aa2.56□□□□□ -2
VPS53YJL029C AGA1P32323 725 aa2.56□□□□□ -2
VPS53YJL029C RRT13P40042 185 aa2.56□□□□□ -2
VPS53YJL029C YFR045WP43617 309 aa2.56□□□□□ -2
VPS53YJL029C CRC1Q12289 327 aa2.56□□□□□ -2
VPS53YJL029C AQY1P0CD91 305 aa2.55□□□□□ -2
VPS53YJL029C MRPL28P36527 147 aa2.55□□□□□ -2
VPS53YJL029C YNL200CP40165 246 aaKnown RBP2.55□□□□□ -2
VPS53YJL029C VMA9Q3E7B6 73 aa2.55□□□□□ -2
VPS53YJL029C HMRA1P0CY11 126 aa2.54□□□□□ -2
VPS53YJL029C RPL16BP26785 198 aaKnown RBP2.54□□□□□ -2
VPS53YJL029C QRI5P32344 111 aa2.54□□□□□ -2
VPS53YJL029C MRPS9P38120 278 aa2.54□□□□□ -2
VPS53YJL029C HSP10P38910 106 aa2.54□□□□□ -2
VPS53YJL029C POG1P40473 351 aa2.54□□□□□ -2
VPS53YJL029C KRE9P39005 276 aa2.54□□□□□ -2
VPS53YJL029C YMR141CP40211 102 aa2.54□□□□□ -2
VPS53YJL029C DIA1P54005 336 aa2.54□□□□□ -2
VPS53YJL029C GIM5Q04493 163 aa2.54□□□□□ -2
VPS53YJL029C FMP16Q12497 93 aa2.54□□□□□ -2
VPS53YJL029C YPL229WQ99395 206 aa2.54□□□□□ -2
VPS53YJL029C DAD2P36162 133 aa2.53□□□□□ -2
VPS53YJL029C RPL32P38061 130 aaKnown RBP2.53□□□□□ -2
VPS53YJL029C TEM1P38987 245 aa2.53□□□□□ -2
VPS53YJL029C SUR2P38992 349 aa2.53□□□□□ -2
VPS53YJL029C VMA7P39111 118 aa2.53□□□□□ -2
VPS53YJL029C SNN1P48232 102 aa2.53□□□□□ -2
VPS53YJL029C EOS1P53938 366 aa2.53□□□□□ -2
VPS53YJL029C SMT3Q12306 101 aaKnown RBP2.53□□□□□ -2
VPS53YJL029C YOL085CQ99345 113 aa2.53□□□□□ -2
VPS53YJL029C MRP49P32388 137 aa2.53□□□□□ -2
VPS53YJL029C SRB6P32570 121 aa2.53□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 33 ms