RNA–Protein interactions for RNA: YFL044C

OTU1, Transcript of Deubiquitylation enzyme that binds to the chaperone-ATPase Cdc48p, yeastyeast

Gene OTU1, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
OTU1YFL044C UBC7Q02159 165 aa2.69□□□□□ -1.98
OTU1YFL044C VPS28Q02767 242 aa2.69□□□□□ -1.98
OTU1YFL044C LOA1Q06508 300 aa2.69□□□□□ -1.98
OTU1YFL044C YPL264CQ08980 353 aa2.69□□□□□ -1.98
OTU1YFL044C SNU23Q12368 194 aaPredicted RBP2.69□□□□□ -1.98
OTU1YFL044C PRM7Q12459 698 aa2.69□□□□□ -1.98
OTU1YFL044C RPS11AP0CX47 156 aaKnown RBP2.68□□□□□ -1.98
OTU1YFL044C RPS11BP0CX48 156 aaKnown RBP2.68□□□□□ -1.98
OTU1YFL044C NHP6BP11633 99 aaKnown RBP2.68□□□□□ -1.98
OTU1YFL044C CDC50P25656 391 aa2.68□□□□□ -1.98
OTU1YFL044C SPT14P32363 452 aa2.68□□□□□ -1.98
OTU1YFL044C VMA7P39111 118 aa2.68□□□□□ -1.98
OTU1YFL044C YER135CP40082 130 aa2.68□□□□□ -1.98
OTU1YFL044C MCM22P47167 239 aa2.68□□□□□ -1.98
OTU1YFL044C SDS23P53172 527 aa2.68□□□□□ -1.98
OTU1YFL044C MHR1Q06630 226 aa2.68□□□□□ -1.98
OTU1YFL044C POC4Q12245 148 aaPredicted RBP2.68□□□□□ -1.98
OTU1YFL044C PUT1P09368 476 aa2.67□□□□□ -1.98
OTU1YFL044C FCY2P17064 533 aa2.67□□□□□ -1.98
OTU1YFL044C RNA15P25299 296 aaPredicted RBP2.67□□□□□ -1.98
OTU1YFL044C YCR025CP25352 136 aa2.67□□□□□ -1.98
OTU1YFL044C IPI1P38803 334 aaPredicted RBP2.67□□□□□ -1.98
OTU1YFL044C SUR2P38992 349 aa2.67□□□□□ -1.98
OTU1YFL044C YIR035CP40579 254 aa2.67□□□□□ -1.98
OTU1YFL044C IGD1P43598 195 aa2.67□□□□□ -1.98
OTU1YFL044C YJR015WP47090 510 aa2.67□□□□□ -1.98
OTU1YFL044C CWC23P52868 283 aaPredicted RBP2.67□□□□□ -1.98
OTU1YFL044C PDR17P53844 350 aa2.67□□□□□ -1.98
OTU1YFL044C MRX11Q03079 207 aa2.67□□□□□ -1.98
OTU1YFL044C MRPS17Q03246 237 aaPredicted RBP2.67□□□□□ -1.98
OTU1YFL044C YOL160WQ08321 113 aa2.67□□□□□ -1.98
OTU1YFL044C CCW12Q12127 133 aa2.67□□□□□ -1.98
OTU1YFL044C SME1Q12330 94 aaPredicted RBP2.67□□□□□ -1.98
OTU1YFL044C RDI1Q12434 202 aa2.67□□□□□ -1.98
OTU1YFL044C TPI1P00942 248 aaKnown RBP2.66□□□□□ -1.98
OTU1YFL044C SEC22P22214 214 aa2.66□□□□□ -1.98
OTU1YFL044C MRPL3P36516 390 aa2.66□□□□□ -1.98
OTU1YFL044C SLM6P38343 150 aa2.66□□□□□ -1.98
OTU1YFL044C YNL200CP40165 246 aaKnown RBP2.66□□□□□ -1.98
OTU1YFL044C YGR025WP53216 100 aa2.66□□□□□ -1.98
OTU1YFL044C FMP41P53889 259 aaKnown RBP2.66□□□□□ -1.98
OTU1YFL044C YMR090WQ04304 227 aaKnown RBP2.66□□□□□ -1.98
OTU1YFL044C RPS25BP0C0T4 108 aaKnown RBP2.65□□□□□ -1.99
OTU1YFL044C YCR001WP25347 104 aa2.65□□□□□ -1.99
OTU1YFL044C SFT2P38166 215 aa2.65□□□□□ -1.99
OTU1YFL044C SWM2P40342 146 aa2.65□□□□□ -1.99
OTU1YFL044C MIC27P50945 234 aa2.65□□□□□ -1.99
OTU1YFL044C DID2P69771 204 aa2.65□□□□□ -1.99
OTU1YFL044C ARL3Q02804 198 aa2.65□□□□□ -1.99
OTU1YFL044C SNO1Q03144 224 aa2.65□□□□□ -1.99
OTU1YFL044C CSM4Q08955 156 aa2.65□□□□□ -1.99
OTU1YFL044C RPS25AQ3E792 108 aaPredicted RBP2.65□□□□□ -1.99
OTU1YFL044C COA2Q3E823 68 aa2.65□□□□□ -1.99
OTU1YFL044C YCR075W-AQ3E830 75 aa2.65□□□□□ -1.99
OTU1YFL044C YDR157WA0A023PZE8 133 aa2.64□□□□□ -1.99
OTU1YFL044C SPS2P08459 502 aa2.64□□□□□ -1.99
OTU1YFL044C DDI2P0CH63 225 aa2.64□□□□□ -1.99
OTU1YFL044C DDI3P0CH64 225 aa2.64□□□□□ -1.99
OTU1YFL044C SMP1P38128 452 aa2.64□□□□□ -1.99
OTU1YFL044C PRE5P40302 234 aaKnown RBP2.64□□□□□ -1.99
OTU1YFL044C YGR026WP53217 278 aa2.64□□□□□ -1.99
OTU1YFL044C YMR082CQ04276 118 aa2.64□□□□□ -1.99
OTU1YFL044C YPR145C-AQ2V2P0 78 aa2.64□□□□□ -1.99
OTU1YFL044C YHR213W-AQ8TGT4 77 aa2.64□□□□□ -1.99
OTU1YFL044C YCL001W-BQ96VH2 84 aa2.64□□□□□ -1.99
OTU1YFL044C YMR316C-AI2HB70 103 aa2.63□□□□□ -1.99
OTU1YFL044C EMP24P32803 203 aaKnown RBP2.63□□□□□ -1.99
OTU1YFL044C SHB17P36136 271 aaKnown RBP2.63□□□□□ -1.99
OTU1YFL044C YHR022CP38763 256 aa2.63□□□□□ -1.99
OTU1YFL044C IRC22P40006 225 aa2.63□□□□□ -1.99
OTU1YFL044C ERG28P40030 148 aa2.63□□□□□ -1.99
OTU1YFL044C YGR269WP40326 108 aa2.63□□□□□ -1.99
OTU1YFL044C MRPS16Q02608 121 aa2.63□□□□□ -1.99
OTU1YFL044C SHH3Q04487 196 aa2.63□□□□□ -1.99
OTU1YFL044C YLR179CQ06252 201 aaKnown RBP2.63□□□□□ -1.99
OTU1YFL044C ATP14Q12349 124 aa2.63□□□□□ -1.99
OTU1YFL044C YKL183C-AQ3E765 70 aa2.63□□□□□ -1.99
OTU1YFL044C CUP2P15315 225 aa2.62□□□□□ -1.99
OTU1YFL044C CNB1P25296 175 aa2.62□□□□□ -1.99
OTU1YFL044C YEL045CP32616 141 aa2.62□□□□□ -1.99
OTU1YFL044C LSM2P38203 95 aaKnown RBP2.62□□□□□ -1.99
OTU1YFL044C YEA6P39953 335 aa2.62□□□□□ -1.99
OTU1YFL044C SPC1P46965 94 aa2.62□□□□□ -1.99
OTU1YFL044C LSM8P47093 109 aaKnown RBP2.62□□□□□ -1.99
OTU1YFL044C GIM5Q04493 163 aa2.62□□□□□ -1.99
OTU1YFL044C YPR195CQ06594 109 aa2.62□□□□□ -1.99
OTU1YFL044C PRR2Q12310 699 aa2.62□□□□□ -1.99
OTU1YFL044C YGR240C-AQ3E786 66 aa2.62□□□□□ -1.99
OTU1YFL044C YPL229WQ99395 206 aa2.62□□□□□ -1.99
OTU1YFL044C VAR1P02381 398 aa2.61□□□□□ -1.99
OTU1YFL044C YBR121C-AP0C5L4 52 aa2.61□□□□□ -1.99
OTU1YFL044C CPT1P17898 393 aa2.61□□□□□ -1.99
OTU1YFL044C SPI1P40092 148 aa2.61□□□□□ -1.99
OTU1YFL044C GTT1P40582 234 aa2.61□□□□□ -1.99
OTU1YFL044C CIN5P40917 295 aa2.61□□□□□ -1.99
OTU1YFL044C RUB1Q03919 77 aa2.61□□□□□ -1.99
OTU1YFL044C DCN1Q12395 269 aa2.61□□□□□ -1.99
OTU1YFL044C YAL063C-AQ3E791 96 aa2.61□□□□□ -1.99
OTU1YFL044C RPB3P16370 318 aaKnown RBP2.6□□□□□ -1.99
OTU1YFL044C ANB1P19211 157 aa2.6□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 93.3 ms