RNA–Protein interactions for RNA: YDL165W

CDC36, Transcript of Component of the CCR4-NOT core complex, yeastyeast

Gene CDC36, Length 576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC36YDL165W MXR2P25566 168 aa1.07□□□□□ -2.24
CDC36YDL165W YCR050CP25630 102 aa1.07□□□□□ -2.24
CDC36YDL165W YCR090CP25654 182 aaKnown RBP1.07□□□□□ -2.24
CDC36YDL165W RPB7P34087 171 aa1.07□□□□□ -2.24
CDC36YDL165W SFT2P38166 215 aa1.07□□□□□ -2.24
CDC36YDL165W SHE1P38200 338 aa1.07□□□□□ -2.24
CDC36YDL165W GPI18P38211 433 aa1.07□□□□□ -2.24
CDC36YDL165W PHO88P38264 188 aaPredicted RBP1.07□□□□□ -2.24
CDC36YDL165W HTD2P38790 280 aaKnown RBP1.07□□□□□ -2.24
CDC36YDL165W SPL2P38839 148 aa1.07□□□□□ -2.24
CDC36YDL165W YHR140WP38842 239 aa1.07□□□□□ -2.24
CDC36YDL165W YAR029WP39549 74 aa1.07□□□□□ -2.24
CDC36YDL165W YER134CP40081 178 aa1.07□□□□□ -2.24
CDC36YDL165W FIP1P45976 327 aa1.07□□□□□ -2.24
CDC36YDL165W DSK2P48510 373 aa1.07□□□□□ -2.24
CDC36YDL165W BXI1P48558 297 aa1.07□□□□□ -2.24
CDC36YDL165W HST4P53688 370 aa1.07□□□□□ -2.24
CDC36YDL165W RSM19P53733 91 aaPredicted RBP1.07□□□□□ -2.24
CDC36YDL165W BUD25P85052 153 aa1.07□□□□□ -2.24
CDC36YDL165W COX12Q01519 83 aa1.07□□□□□ -2.24
CDC36YDL165W PBP4Q07362 185 aaKnown RBP1.07□□□□□ -2.24
CDC36YDL165W SLM3Q12093 417 aa1.07□□□□□ -2.24
CDC36YDL165W JID1Q12350 301 aa1.07□□□□□ -2.24
CDC36YDL165W ATO3Q12359 275 aa1.07□□□□□ -2.24
CDC36YDL165W EMC6Q12431 108 aa1.07□□□□□ -2.24
CDC36YDL165W PCL9Q12477 304 aa1.07□□□□□ -2.24
CDC36YDL165W YPR064WQ12492 139 aa1.07□□□□□ -2.24
CDC36YDL165W YFL041W-AQ3E817 63 aa1.07□□□□□ -2.24
CDC36YDL165W KSH1Q8TGJ3 72 aa1.07□□□□□ -2.24
CDC36YDL165W MSB2P32334 1306 aa1.07□□□□□ -2.24
CDC36YDL165W UBR1P19812 1950 aa1.07□□□□□ -2.24
CDC36YDL165W MLP1Q02455 1875 aaKnown RBP1.06□□□□□ -2.24
CDC36YDL165W PAU1P0CE88 120 aa1.06□□□□□ -2.24
CDC36YDL165W PAU14P0CE89 120 aa1.06□□□□□ -2.24
CDC36YDL165W PAU6P0CE90 120 aa1.06□□□□□ -2.24
CDC36YDL165W PAU18P0CE91 120 aa1.06□□□□□ -2.24
CDC36YDL165W PAU8P0CE92 120 aa1.06□□□□□ -2.24
CDC36YDL165W PAU11P0CE93 120 aa1.06□□□□□ -2.24
CDC36YDL165W UBC4P15731 148 aa1.06□□□□□ -2.24
CDC36YDL165W BET1P22804 142 aa1.06□□□□□ -2.24
CDC36YDL165W HSP12P22943 109 aaKnown RBP1.06□□□□□ -2.24
CDC36YDL165W TOM40P23644 387 aaKnown RBP1.06□□□□□ -2.24
CDC36YDL165W YRA2P36036 203 aaKnown RBP RIP-Chip data1.06□□□□□ -2.24not detected
CDC36YDL165W PAM17P36147 197 aa1.06□□□□□ -2.24
CDC36YDL165W SMP1P38128 452 aa1.06□□□□□ -2.24
CDC36YDL165W INM1P38710 295 aa1.06□□□□□ -2.24
CDC36YDL165W PAU13P38725 120 aa1.06□□□□□ -2.24
CDC36YDL165W SVP26P38869 228 aa1.06□□□□□ -2.24
CDC36YDL165W SNF11P38956 169 aa1.06□□□□□ -2.24
CDC36YDL165W TIM17P39515 158 aa1.06□□□□□ -2.24
CDC36YDL165W YER181CP40097 107 aa1.06□□□□□ -2.24
CDC36YDL165W YJL028WP47062 111 aa1.06□□□□□ -2.24
CDC36YDL165W SPG1P50088 95 aa1.06□□□□□ -2.24
CDC36YDL165W YGL118CP53132 145 aa1.06□□□□□ -2.24
CDC36YDL165W YGL088WP53151 121 aa1.06□□□□□ -2.24
CDC36YDL165W SDS23P53172 527 aa1.06□□□□□ -2.24
CDC36YDL165W MST27P53176 234 aa1.06□□□□□ -2.24
CDC36YDL165W TPC1P53257 314 aa1.06□□□□□ -2.24
CDC36YDL165W PAU4P53427 120 aa1.06□□□□□ -2.24
CDC36YDL165W POP3P53833 195 aaPredicted RBP1.06□□□□□ -2.24
CDC36YDL165W PAU10Q03050 120 aa1.06□□□□□ -2.24
CDC36YDL165W YLR296WQ05898 108 aa1.06□□□□□ -2.24
CDC36YDL165W RRT7Q07829 113 aa1.06□□□□□ -2.24
CDC36YDL165W GAT3Q07928 141 aa1.06□□□□□ -2.24
CDC36YDL165W PAU20Q08322 120 aa1.06□□□□□ -2.24
CDC36YDL165W YOR105WQ08504 108 aa1.06□□□□□ -2.24
CDC36YDL165W YOR292CQ08743 309 aa1.06□□□□□ -2.24
CDC36YDL165W TIM18Q08749 192 aa1.06□□□□□ -2.24
CDC36YDL165W YOR385WQ08909 290 aa1.06□□□□□ -2.24
CDC36YDL165W YOR015WQ12169 119 aa1.06□□□□□ -2.24
CDC36YDL165W YKL023C-AQ2V2P3 75 aa1.06□□□□□ -2.24
CDC36YDL165W PAU9Q3E770 120 aa1.06□□□□□ -2.24
CDC36YDL165W YAL063C-AQ3E791 96 aa1.06□□□□□ -2.24
CDC36YDL165W RPS22BQ3E7Y3 130 aaKnown RBP1.06□□□□□ -2.24
CDC36YDL165W SCS22Q6Q595 175 aa1.06□□□□□ -2.24
CDC36YDL165W ODC2Q99297 307 aa1.06□□□□□ -2.24
CDC36YDL165W YPL229WQ99395 206 aa1.06□□□□□ -2.24
CDC36YDL165W HTL1Q9URQ5 78 aa1.06□□□□□ -2.24
CDC36YDL165W FLO11P08640 1367 aa1.06□□□□□ -2.24
CDC36YDL165W YLR422WQ06409 1932 aa1.05□□□□□ -2.24
CDC36YDL165W YHR139C-AO13536 103 aa1.05□□□□□ -2.24
CDC36YDL165W MDH2P22133 377 aa1.05□□□□□ -2.24
CDC36YDL165W MAK31P23059 88 aa1.05□□□□□ -2.24
CDC36YDL165W MRS4P23500 304 aa1.05□□□□□ -2.24
CDC36YDL165W AHT1P29589 182 aa1.05□□□□□ -2.24
CDC36YDL165W PAU2P32612 120 aa1.05□□□□□ -2.24
CDC36YDL165W SPT4P32914 102 aaPredicted RBP1.05□□□□□ -2.24
CDC36YDL165W APS1P35181 156 aa1.05□□□□□ -2.24
CDC36YDL165W MRPL39P36533 70 aa1.05□□□□□ -2.24
CDC36YDL165W PAU24P38155 120 aa1.05□□□□□ -2.24
CDC36YDL165W RRT13P40042 185 aa1.05□□□□□ -2.24
CDC36YDL165W PEX17P40155 199 aa1.05□□□□□ -2.24
CDC36YDL165W YIL029CP40538 142 aa1.05□□□□□ -2.24
CDC36YDL165W YIA6P40556 373 aa1.05□□□□□ -2.24
CDC36YDL165W SKI6P46948 246 aaPredicted RBP1.05□□□□□ -2.24
CDC36YDL165W TOS8P53147 276 aa1.05□□□□□ -2.24
CDC36YDL165W YGL034CP53186 121 aa1.05□□□□□ -2.24
CDC36YDL165W PAU12P53343 120 aa1.05□□□□□ -2.24
CDC36YDL165W SWS2P53937 143 aa1.05□□□□□ -2.24
CDC36YDL165W YNL046WP53956 172 aa1.05□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 40.7 ms