RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 PAWRQ96IZ0 340 aaKnown RBP18.6■□□□□ 0.57
PHGDH-232ENST00000641947 MCEEQ96PE7 176 aa18.6■□□□□ 0.57
PHGDH-232ENST00000641947 RTP3Q9BQQ7 232 aa18.6■□□□□ 0.57
PHGDH-232ENST00000641947 MRPL47Q9HD33 250 aaKnown RBP18.6■□□□□ 0.57
PHGDH-232ENST00000641947 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.6■□□□□ 0.57
PHGDH-232ENST00000641947 COL4A6Q14031 1691 aa18.6■□□□□ 0.57
PHGDH-232ENST00000641947 TMEM191CA6NGB0 347 aa18.59■□□□□ 0.57
PHGDH-232ENST00000641947 GOLGA8SH3BPF8 625 aa18.59■□□□□ 0.57
PHGDH-232ENST00000641947 CES2O00748 559 aa18.59■□□□□ 0.57
PHGDH-232ENST00000641947 HSPA1AP0DMV8 641 aaKnown RBP18.59■□□□□ 0.57
PHGDH-232ENST00000641947 HSPA1BP0DMV9 641 aaKnown RBP18.59■□□□□ 0.57
PHGDH-232ENST00000641947 ADORA2BP29275 332 aa18.59■□□□□ 0.57
PHGDH-232ENST00000641947 RGS7P49802 495 aa18.59■□□□□ 0.57
PHGDH-232ENST00000641947 GSCP56915 257 aaPredicted RBP18.59■□□□□ 0.57
PHGDH-232ENST00000641947 RNASE9P60153 205 aaKnown RBP18.59■□□□□ 0.57
PHGDH-232ENST00000641947 STILQ15468 1287 aa18.59■□□□□ 0.57
PHGDH-232ENST00000641947 AADACL2Q6P093 401 aa18.59■□□□□ 0.57
PHGDH-232ENST00000641947 PMF1Q6P1K2 205 aa18.59■□□□□ 0.57
PHGDH-232ENST00000641947 DEFB128Q7Z7B8 93 aa18.59■□□□□ 0.57
PHGDH-232ENST00000641947 COLGALT2Q8IYK4 626 aa18.59■□□□□ 0.57
PHGDH-232ENST00000641947 SLC2A14Q8TDB8 520 aa18.59■□□□□ 0.57
PHGDH-232ENST00000641947 C18orf8Q96DM3 657 aa18.59■□□□□ 0.57
PHGDH-232ENST00000641947 DDX27Q96GQ7 796 aaKnown RBP18.59■□□□□ 0.57
PHGDH-232ENST00000641947 PIWIL1Q96J94 861 aaKnown RBP18.59■□□□□ 0.57
PHGDH-232ENST00000641947 CRTAC1Q9NQ79 661 aa18.59■□□□□ 0.57
PHGDH-232ENST00000641947 HCSTQ9UBK5 93 aa18.59■□□□□ 0.57
PHGDH-232ENST00000641947 DNAJB4Q9UDY4 337 aa18.59■□□□□ 0.57
PHGDH-232ENST00000641947 PTPRSQ13332 1948 aa18.58■□□□□ 0.57
PHGDH-232ENST00000641947 E5RJQ4 531 aa18.58■□□□□ 0.57
PHGDH-232ENST00000641947 PROSCO94903 275 aa18.58■□□□□ 0.57
PHGDH-232ENST00000641947 PDE4CQ08493 712 aa18.58■□□□□ 0.57
PHGDH-232ENST00000641947 PAQR9Q6ZVX9 377 aa18.58■□□□□ 0.57
PHGDH-232ENST00000641947 JOSD2Q8TAC2 188 aa18.58■□□□□ 0.57
PHGDH-232ENST00000641947 SLC35F5Q8WV83 523 aa18.58■□□□□ 0.57
PHGDH-232ENST00000641947 UBXN4Q92575 508 aa18.58■□□□□ 0.57
PHGDH-232ENST00000641947 APBB2Q92870 758 aa18.58■□□□□ 0.57
PHGDH-232ENST00000641947 PBKQ96KB5 322 aa18.58■□□□□ 0.57
PHGDH-232ENST00000641947 UROC1Q96N76 676 aa18.58■□□□□ 0.57
PHGDH-232ENST00000641947 ELAC1Q9H777 363 aaKnown RBP18.58■□□□□ 0.57
PHGDH-232ENST00000641947 DDX43Q9NXZ2 648 aaKnown RBP18.58■□□□□ 0.57
PHGDH-232ENST00000641947 M0QZQ0 153 aa18.58■□□□□ 0.56
PHGDH-232ENST00000641947 MYO1FO00160 1098 aa18.58■□□□□ 0.56
PHGDH-232ENST00000641947 CLDN5O00501 218 aa18.58■□□□□ 0.56
PHGDH-232ENST00000641947 SPOPO43791 374 aa18.58■□□□□ 0.56
PHGDH-232ENST00000641947 CEP104O60308 925 aa18.58■□□□□ 0.56
PHGDH-232ENST00000641947 FAM163BP0C2L3 166 aa18.58■□□□□ 0.56
PHGDH-232ENST00000641947 CTNNA1P35221 906 aaKnown RBP18.58■□□□□ 0.56
PHGDH-232ENST00000641947 ZNF211Q13398 564 aaPredicted RBP18.58■□□□□ 0.56
PHGDH-232ENST00000641947 PKN2Q16513 984 aaKnown RBP18.58■□□□□ 0.56
PHGDH-232ENST00000641947 FUKQ8N0W3 1084 aa18.58■□□□□ 0.56
PHGDH-232ENST00000641947 RASGEF1CQ8N431 466 aa18.58■□□□□ 0.56
PHGDH-232ENST00000641947 ANKLE1Q8NAG6 615 aa18.58■□□□□ 0.56
PHGDH-232ENST00000641947 SPATA4Q8NEY3 305 aa18.58■□□□□ 0.56
PHGDH-232ENST00000641947 RSPH1Q8WYR4 309 aa18.58■□□□□ 0.56
PHGDH-232ENST00000641947 MCRS1Q96EZ8 462 aa18.58■□□□□ 0.56
PHGDH-232ENST00000641947 CASD1Q96PB1 797 aa18.58■□□□□ 0.56
PHGDH-232ENST00000641947 STRIP2Q9ULQ0 834 aa18.58■□□□□ 0.56
PHGDH-232ENST00000641947 PATJQ8NI35 1801 aa18.57■□□□□ 0.56
PHGDH-232ENST00000641947 PTPN1P18031 435 aaKnown RBP18.57■□□□□ 0.56
PHGDH-232ENST00000641947 CTNNA2P26232 953 aa18.57■□□□□ 0.56
PHGDH-232ENST00000641947 CFAP221Q4G0U5 840 aa18.57■□□□□ 0.56
PHGDH-232ENST00000641947 CCDC181Q5TID7 509 aa18.57■□□□□ 0.56
PHGDH-232ENST00000641947 FAM183BPQ6ZVS7 135 aa18.57■□□□□ 0.56
PHGDH-232ENST00000641947 TMEM86AQ8N2M4 240 aa18.57■□□□□ 0.56
PHGDH-232ENST00000641947 URGCPQ8TCY9 931 aa18.57■□□□□ 0.56
PHGDH-232ENST00000641947 SLC4A5Q9BY07 1137 aa18.57■□□□□ 0.56
PHGDH-232ENST00000641947 C11orf49Q9H6J7 331 aa18.57■□□□□ 0.56
PHGDH-232ENST00000641947 ST7Q9NRC1 585 aa18.57■□□□□ 0.56
PHGDH-232ENST00000641947 METTL5Q9NRN9 209 aaKnown RBP18.57■□□□□ 0.56
PHGDH-232ENST00000641947 RBM12Q9NTZ6 932 aaKnown RBP18.57■□□□□ 0.56
PHGDH-232ENST00000641947 MIF4GDA9UHW6 222 aaKnown RBP18.56■□□□□ 0.56
PHGDH-232ENST00000641947 TCF4P15884 667 aa18.56■□□□□ 0.56
PHGDH-232ENST00000641947 ITGB8P26012 769 aa18.56■□□□□ 0.56
PHGDH-232ENST00000641947 RFC1P35251 1148 aaPredicted RBP18.56■□□□□ 0.56
PHGDH-232ENST00000641947 CTCFP49711 727 aaPredicted RBP18.56■□□□□ 0.56
PHGDH-232ENST00000641947 TAS2R40P59535 323 aa18.56■□□□□ 0.56
PHGDH-232ENST00000641947 MDH1BQ5I0G3 518 aa18.56■□□□□ 0.56
PHGDH-232ENST00000641947 DCLRE1AQ6PJP8 1040 aa18.56■□□□□ 0.56
PHGDH-232ENST00000641947 ANKRD52Q8NB46 1076 aa18.56■□□□□ 0.56
PHGDH-232ENST00000641947 ACTRT1Q8TDG2 376 aa18.56■□□□□ 0.56
PHGDH-232ENST00000641947 ANKRD7Q92527 254 aa18.56■□□□□ 0.56
PHGDH-232ENST00000641947 TNIP3Q96KP6 325 aa18.56■□□□□ 0.56
PHGDH-232ENST00000641947 SYNCQ9H7C4 482 aa18.56■□□□□ 0.56
PHGDH-232ENST00000641947 ANKZF1Q9H8Y5 726 aa18.56■□□□□ 0.56
PHGDH-232ENST00000641947 PCDHB7Q9Y5E2 793 aa18.56■□□□□ 0.56
PHGDH-232ENST00000641947 PCDHA3Q9Y5H8 950 aa18.56■□□□□ 0.56
PHGDH-232ENST00000641947 MYBPHLA2RUH7 354 aa18.55■□□□□ 0.56
PHGDH-232ENST00000641947 SIGLEC16A6NMB1 481 aa18.55■□□□□ 0.56
PHGDH-232ENST00000641947 CYP11A1P05108 521 aa18.55■□□□□ 0.56
PHGDH-232ENST00000641947 CLTBP09497 229 aa18.55■□□□□ 0.56
PHGDH-232ENST00000641947 ODC1P11926 461 aa18.55■□□□□ 0.56
PHGDH-232ENST00000641947 BST2Q10589 180 aaKnown RBP18.55■□□□□ 0.56
PHGDH-232ENST00000641947 ZNF268Q14587 947 aaPredicted RBP18.55■□□□□ 0.56
PHGDH-232ENST00000641947 TRNP1Q6NT89 227 aa18.55■□□□□ 0.56
PHGDH-232ENST00000641947 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.55■□□□□ 0.56
PHGDH-232ENST00000641947 EMC1Q8N766 993 aa18.55■□□□□ 0.56
PHGDH-232ENST00000641947 SUSD3Q96L08 255 aa18.55■□□□□ 0.56
PHGDH-232ENST00000641947 HNRNPABQ99729 332 aaKnown RBP18.55■□□□□ 0.56
PHGDH-232ENST00000641947 SYT15Q9BQS2 421 aa18.55■□□□□ 0.56
PHGDH-232ENST00000641947 SELENOOQ9BVL4 669 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms