RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 TERF1P54274 439 aa13.89□□□□□ -0.19
PHGDH-221ENST00000641573 C1QBPQ07021 282 aaKnown RBP13.89□□□□□ -0.19
PHGDH-221ENST00000641573 TUSC3Q13454 348 aa13.89□□□□□ -0.19
PHGDH-221ENST00000641573 CNGA2Q16280 664 aa13.89□□□□□ -0.19
PHGDH-221ENST00000641573 TCTN1Q2MV58 587 aa13.89□□□□□ -0.19
PHGDH-221ENST00000641573 CLLU1OSQ5K130 101 aa13.89□□□□□ -0.19
PHGDH-221ENST00000641573 LIN9Q5TKA1 542 aa13.89□□□□□ -0.19
PHGDH-221ENST00000641573 MMS22LQ6ZRQ5 1243 aa13.89□□□□□ -0.19
PHGDH-221ENST00000641573 DPH6Q7L8W6 267 aa13.89□□□□□ -0.19
PHGDH-221ENST00000641573 SLFN11Q7Z7L1 901 aa13.89□□□□□ -0.19
PHGDH-221ENST00000641573 ADGRF2Q8IZF7 708 aa13.89□□□□□ -0.19
PHGDH-221ENST00000641573 SYCE1Q8N0S2 351 aa13.89□□□□□ -0.19
PHGDH-221ENST00000641573 WDTC1Q8N5D0 677 aa13.89□□□□□ -0.19
PHGDH-221ENST00000641573 C1orf131Q8NDD1 294 aaKnown RBP13.89□□□□□ -0.19
PHGDH-221ENST00000641573 MYRIPQ8NFW9 859 aa13.89□□□□□ -0.19
PHGDH-221ENST00000641573 URGCPQ8TCY9 931 aa13.89□□□□□ -0.19
PHGDH-221ENST00000641573 KBTBD7Q8WVZ9 684 aa13.89□□□□□ -0.19
PHGDH-221ENST00000641573 DDX27Q96GQ7 796 aaKnown RBP13.89□□□□□ -0.19
PHGDH-221ENST00000641573 SENP8Q96LD8 212 aa13.89□□□□□ -0.19
PHGDH-221ENST00000641573 C11orf70Q9BRQ4 267 aa13.89□□□□□ -0.19
PHGDH-221ENST00000641573 NUP85Q9BW27 656 aa13.89□□□□□ -0.19
PHGDH-221ENST00000641573 LHX5Q9H2C1 402 aa13.89□□□□□ -0.19
PHGDH-221ENST00000641573 ELAC1Q9H777 363 aaKnown RBP13.89□□□□□ -0.19
PHGDH-221ENST00000641573 UBE2ZQ9H832 354 aaPredicted RBP13.89□□□□□ -0.19
PHGDH-221ENST00000641573 AVENQ9NQS1 362 aaPredicted RBP13.89□□□□□ -0.19
PHGDH-221ENST00000641573 TMEM161AQ9NX61 479 aa13.89□□□□□ -0.19
PHGDH-221ENST00000641573 LMCD1Q9NZU5 365 aa13.89□□□□□ -0.19
PHGDH-221ENST00000641573 CHORDC1Q9UHD1 332 aaPredicted RBP13.89□□□□□ -0.19
PHGDH-221ENST00000641573 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.89□□□□□ -0.19
PHGDH-221ENST00000641573 CEP83Q9Y592 693 aa13.89□□□□□ -0.19
PHGDH-221ENST00000641573 SAR1BQ9Y6B6 198 aa13.89□□□□□ -0.19
PHGDH-221ENST00000641573 SCN1AP35498 2009 aa13.88□□□□□ -0.19
PHGDH-221ENST00000641573 BUB1BO60566 1050 aaPredicted RBP13.88□□□□□ -0.19
PHGDH-221ENST00000641573 SLU7O95391 586 aaKnown RBP13.88□□□□□ -0.19
PHGDH-221ENST00000641573 CXCL10P02778 98 aa13.88□□□□□ -0.19
PHGDH-221ENST00000641573 RRM1P23921 792 aa13.88□□□□□ -0.19
PHGDH-221ENST00000641573 PTP4A2Q12974 167 aa13.88□□□□□ -0.19
PHGDH-221ENST00000641573 STILQ15468 1287 aa13.88□□□□□ -0.19
PHGDH-221ENST00000641573 UPP1Q16831 310 aa13.88□□□□□ -0.19
PHGDH-221ENST00000641573 NOMO2Q5JPE7 1267 aa13.88□□□□□ -0.19
PHGDH-221ENST00000641573 MEI1Q5TIA1 1274 aa13.88□□□□□ -0.19
PHGDH-221ENST00000641573 DSTYKQ6XUX3 929 aa13.88□□□□□ -0.19
PHGDH-221ENST00000641573 PHLDB2Q86SQ0 1253 aa13.88□□□□□ -0.19
PHGDH-221ENST00000641573 ACOT1Q86TX2 421 aa13.88□□□□□ -0.19
PHGDH-221ENST00000641573 OSTM1Q86WC4 334 aa13.88□□□□□ -0.19
PHGDH-221ENST00000641573 PDCL2Q8N4E4 241 aa13.88□□□□□ -0.19
PHGDH-221ENST00000641573 ZNF564Q8TBZ8 553 aaPredicted RBP13.88□□□□□ -0.19
PHGDH-221ENST00000641573 RABGGTAQ92696 567 aa13.88□□□□□ -0.19
PHGDH-221ENST00000641573 VCPIP1Q96JH7 1222 aa13.88□□□□□ -0.19
PHGDH-221ENST00000641573 UROC1Q96N76 676 aa13.88□□□□□ -0.19
PHGDH-221ENST00000641573 PAAF1Q9BRP4 392 aa13.88□□□□□ -0.19
PHGDH-221ENST00000641573 TLR10Q9BXR5 811 aa13.88□□□□□ -0.19
PHGDH-221ENST00000641573 DNAI2Q9GZS0 605 aa13.88□□□□□ -0.19
PHGDH-221ENST00000641573 GOLPH3Q9H4A6 298 aa13.88□□□□□ -0.19
PHGDH-221ENST00000641573 UVRAGQ9P2Y5 699 aa13.88□□□□□ -0.19
PHGDH-221ENST00000641573 SNX12Q9UMY4 172 aa13.88□□□□□ -0.19
PHGDH-221ENST00000641573 HYOU1Q9Y4L1 999 aa13.88□□□□□ -0.19
PHGDH-221ENST00000641573 TET1Q8NFU7 2136 aa13.87□□□□□ -0.19
PHGDH-221ENST00000641573 M0QYV0 167 aa13.87□□□□□ -0.19
PHGDH-221ENST00000641573 HCRTO43612 131 aa13.87□□□□□ -0.19
PHGDH-221ENST00000641573 ARHGEF15O94989 841 aa13.87□□□□□ -0.19
PHGDH-221ENST00000641573 CALB1P05937 261 aa13.87□□□□□ -0.19
PHGDH-221ENST00000641573 PDGFRBP09619 1106 aa13.87□□□□□ -0.19
PHGDH-221ENST00000641573 PRLRP16471 622 aa13.87□□□□□ -0.19
PHGDH-221ENST00000641573 KCNA5P22460 613 aa13.87□□□□□ -0.19
PHGDH-221ENST00000641573 MMP8P22894 467 aa13.87□□□□□ -0.19
PHGDH-221ENST00000641573 LMO2P25791 158 aa13.87□□□□□ -0.19
PHGDH-221ENST00000641573 WHAMMP3Q1A5X7 153 aa13.87□□□□□ -0.19
PHGDH-221ENST00000641573 GOLGA7BQ2TAP0 167 aa13.87□□□□□ -0.19
PHGDH-221ENST00000641573 C2CD6Q53TS8 623 aa13.87□□□□□ -0.19
PHGDH-221ENST00000641573 WSCD1Q658N2 575 aa13.87□□□□□ -0.19
PHGDH-221ENST00000641573 LCLAT1Q6UWP7 414 aa13.87□□□□□ -0.19
PHGDH-221ENST00000641573 PEX26Q7Z412 305 aa13.87□□□□□ -0.19
PHGDH-221ENST00000641573 DAAM2Q86T65 1068 aa13.87□□□□□ -0.19
PHGDH-221ENST00000641573 ERICH1Q86X53 443 aa13.87□□□□□ -0.19
PHGDH-221ENST00000641573 CRYBG2Q8N1P7 616 aa13.87□□□□□ -0.19
PHGDH-221ENST00000641573 C3orf58Q8NDZ4 430 aa13.87□□□□□ -0.19
PHGDH-221ENST00000641573 GDPD5Q8WTR4 605 aa13.87□□□□□ -0.19
PHGDH-221ENST00000641573 ZBED2Q9BTP6 218 aa13.87□□□□□ -0.19
PHGDH-221ENST00000641573 CARD6Q9BX69 1037 aa13.87□□□□□ -0.19
PHGDH-221ENST00000641573 DPEP3Q9H4B8 488 aa13.87□□□□□ -0.19
PHGDH-221ENST00000641573 ABCB6Q9NP58 842 aa13.87□□□□□ -0.19
PHGDH-221ENST00000641573 PCDHB7Q9Y5E2 793 aa13.87□□□□□ -0.19
PHGDH-221ENST00000641573 COL4A4P53420 1690 aaPredicted RBP13.87□□□□□ -0.19
PHGDH-221ENST00000641573 TMEM110-MUSTN1A8MSY1 372 aa13.86□□□□□ -0.19
PHGDH-221ENST00000641573 DCXO43602 365 aa13.86□□□□□ -0.19
PHGDH-221ENST00000641573 LPXNO60711 386 aa13.86□□□□□ -0.19
PHGDH-221ENST00000641573 SRGAP2O75044 1071 aa13.86□□□□□ -0.19
PHGDH-221ENST00000641573 BAIAP3O94812 1187 aa13.86□□□□□ -0.19
PHGDH-221ENST00000641573 TCP1P17987 556 aaKnown RBP13.86□□□□□ -0.19
PHGDH-221ENST00000641573 PAX3P23760 479 aa13.86□□□□□ -0.19
PHGDH-221ENST00000641573 AARSP49588 968 aaKnown RBP eCLIP13.86□□□□□ -0.19
PHGDH-221ENST00000641573 RPS6KA1Q15418 735 aa13.86□□□□□ -0.19
PHGDH-221ENST00000641573 LEXMQ3ZCV2 418 aa13.86□□□□□ -0.19
PHGDH-221ENST00000641573 TIGD5Q53EQ6 642 aa13.86□□□□□ -0.19
PHGDH-221ENST00000641573 ARHGAP17Q68EM7 881 aa13.86□□□□□ -0.19
PHGDH-221ENST00000641573 C11orf63Q6NUN7 778 aa13.86□□□□□ -0.19
PHGDH-221ENST00000641573 LLGL2Q6P1M3 1020 aa13.86□□□□□ -0.19
PHGDH-221ENST00000641573 DCLRE1AQ6PJP8 1040 aa13.86□□□□□ -0.19
PHGDH-221ENST00000641573 CD300LGQ6UXG3 332 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms